BLASTX nr result

ID: Coptis25_contig00010239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010239
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ91133.1| ampk protein [Platanus x acerifolia]                   91   1e-16
ref|XP_002868699.1| predicted protein [Arabidopsis lyrata subsp....    74   2e-11
emb|CBI33521.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002275302.1| PREDICTED: uncharacterized protein LOC100255...    72   6e-11
ref|NP_568573.2| 5'-AMP-activated protein kinase-like protein [A...    71   8e-11

>emb|CAJ91133.1| ampk protein [Platanus x acerifolia]
          Length = 205

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 60/145 (41%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
 Frame = +3

Query: 51  MECHMAGVMRC---------------LGMENIHKRRFKVGLCNTRKDYKKRTLF---SNG 176
           MEC M GV RC               LG ENI +    V LCN R   ++ T     S G
Sbjct: 1   MECQMTGVARCCSAKHDSWFFWHSRKLGQENIQRPSCNVALCNLRMGSRRLTFLHHASIG 60

Query: 177 KYTRRQS----FALPIXXXXXXXXXXXXXXXXNGDEATSEDSLDGVLSQKLASDELKSLL 344
           K   + S    F++P+                N DE   +DS    LSQ L  D LKSLL
Sbjct: 61  KSPMQHSSWRIFSMPVSVEKESSSLSPEGYTSNSDEVAEKDSSKEFLSQPLDGDGLKSLL 120

Query: 345 ADSQRSKLVNKLSEANQQNRFLKRQ 419
           ADS+R+KL+ KLSEANQ NRFLKRQ
Sbjct: 121 ADSERTKLIRKLSEANQHNRFLKRQ 145


>ref|XP_002868699.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314535|gb|EFH44958.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 277

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = +3

Query: 267 DEATSEDSLDGVLSQKLASDELKSLLADSQRSKLVNKLSEANQQNRFLKRQ 419
           + + SEDSLD  LS+ L SDELKSLL D++RSKLV KLSEANQQNRFLKRQ
Sbjct: 68  ESSLSEDSLDESLSRPLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQ 118


>emb|CBI33521.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
 Frame = +3

Query: 51  MECHMAGVMR-C--------------LGMENIHKRRFKVGLCNTRKDYKKRTLFSN---G 176
           MECHM G+ R C              L  E++   R  V   N R   +K  +      G
Sbjct: 56  MECHMIGISRGCPENQVSWFSWKSTNLDWEDVRGLRCNVTRWNLRVGSQKCAITCQAFVG 115

Query: 177 KYTRRQ----SFALPIXXXXXXXXXXXXXXXXNGDEATSEDSLDGVLSQKLASDELKSLL 344
           K +  Q    ++++PI                + + A SEDS + +L Q L SDELK+LL
Sbjct: 116 KQSMHQKLWRTYSMPINLDKESSSPFSQDYSSDNENA-SEDSPEELLDQPLGSDELKTLL 174

Query: 345 ADSQRSKLVNKLSEANQQNRFLKRQ 419
            DS+R+KL+ KLSEANQQNR LKRQ
Sbjct: 175 VDSERTKLIKKLSEANQQNRILKRQ 199


>ref|XP_002275302.1| PREDICTED: uncharacterized protein LOC100255271 isoform 1 [Vitis
           vinifera]
          Length = 303

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
 Frame = +3

Query: 51  MECHMAGVMR-C--------------LGMENIHKRRFKVGLCNTRKDYKKRTLFSN---G 176
           MECHM G+ R C              L  E++   R  V   N R   +K  +      G
Sbjct: 1   MECHMIGISRGCPENQVSWFSWKSTNLDWEDVRGLRCNVTRWNLRVGSQKCAITCQAFVG 60

Query: 177 KYTRRQ----SFALPIXXXXXXXXXXXXXXXXNGDEATSEDSLDGVLSQKLASDELKSLL 344
           K +  Q    ++++PI                + + A SEDS + +L Q L SDELK+LL
Sbjct: 61  KQSMHQKLWRTYSMPINLDKESSSPFSQDYSSDNENA-SEDSPEELLDQPLGSDELKTLL 119

Query: 345 ADSQRSKLVNKLSEANQQNRFLKRQ 419
            DS+R+KL+ KLSEANQQNR LKRQ
Sbjct: 120 VDSERTKLIKKLSEANQQNRILKRQ 144


>ref|NP_568573.2| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana]
           gi|332007093|gb|AED94476.1| 5'-AMP-activated protein
           kinase-like protein [Arabidopsis thaliana]
          Length = 273

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +3

Query: 267 DEATSEDSLDGVLSQKLASDELKSLLADSQRSKLVNKLSEANQQNRFLKRQ 419
           + + SED LD  LS+ L SDELKSLL D++RSKLV KLSEANQQNRFLKRQ
Sbjct: 68  ESSLSEDLLDESLSRPLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQ 118