BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010229
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...    64   1e-08
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    61   1e-07
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|AAO22642.1| unknown protein [Arabidopsis thaliana]                  58   9e-07
ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Ar...    58   9e-07

>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -2

Query: 214  KDIDFSEHFFRILTEISVSHCIS-EVPAPLAMQSPNQQLHLSFIAVDMYAKLVSSLLK 44
            K  D ++ FFRI+TE+SV+HC+S EV    A+QSP Q  +LSF+A+D+YAKLV S+LK
Sbjct: 1833 KGDDMTDRFFRIITELSVAHCLSSEVINSGALQSPQQGQNLSFLAIDIYAKLVFSILK 1890


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
 Frame = -2

Query: 214  KDIDFSEHFFRILTEISVSHCI-SEVPAPLAMQSPNQQL-HLSFIAVDMYAKLVSSLLK 44
            K  D ++ FFR+LTEISV+HC+ SEV    A+QS  QQ+ +LSF+A+D+YAKLV S+LK
Sbjct: 1932 KGDDMTDRFFRLLTEISVAHCLSSEVINSGALQSSPQQIQNLSFLAIDIYAKLVFSILK 1990


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/58 (50%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -2

Query: 214  KDIDFSEHFFRILTEISVSHCIS-EVPAPLAMQSPNQQLHLSFIAVDMYAKLVSSLLK 44
            K  + ++ FFR+L E+SV+HC+S EV     +QSP+Q  +LSF+A+D+YAKLV ++LK
Sbjct: 1886 KGDETTDRFFRVLMELSVAHCLSSEVINSSVLQSPHQMQNLSFLAIDIYAKLVIAILK 1943


>gb|AAO22642.1| unknown protein [Arabidopsis thaliana]
          Length = 682

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -2

Query: 214 KDIDFSEHFFRILTEISVSHCISEVPAPL-AMQSPNQQLHLSFIAVDMYAKLVSSLLKH 41
           K  D +E FFRIL E+SV+HCIS       A+QSP Q    SF+ +DMYAKLV S+LK+
Sbjct: 193 KGDDTTESFFRILLELSVAHCISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSILKY 251


>ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Arabidopsis thaliana]
            gi|332189257|gb|AEE27378.1| CCR4-NOT transcription
            complex subunit 1 [Arabidopsis thaliana]
          Length = 2377

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -2

Query: 214  KDIDFSEHFFRILTEISVSHCISEVPAPL-AMQSPNQQLHLSFIAVDMYAKLVSSLLKH 41
            K  D +E FFRIL E+SV+HCIS       A+QSP Q    SF+ +DMYAKLV S+LK+
Sbjct: 1888 KGDDTTESFFRILLELSVAHCISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSILKY 1946