BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010228
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...    70   2e-10
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...    66   3e-09
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AAO22642.1| unknown protein [Arabidopsis thaliana]                  63   2e-08
ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Ar...    63   2e-08

>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/61 (59%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = -1

Query: 195  GLLKDIDFSEHFFRILTEISVSHCIS-EVPSPLAMQSPNQ*LHLSFIAVDMYAKLVSSLL 19
            GLLK  D ++ FFRI+TE+SV+HC+S EV +  A+QSP Q  +LSF+A+D+YAKLV S+L
Sbjct: 1830 GLLKGDDMTDRFFRIITELSVAHCLSSEVINSGALQSPQQGQNLSFLAIDIYAKLVFSIL 1889

Query: 18   K 16
            K
Sbjct: 1890 K 1890


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -1

Query: 195  GLLKDIDFSEHFFRILTEISVSHCI-SEVPSPLAMQ-SPNQ*LHLSFIAVDMYAKLVSSL 22
            GLLK  D ++ FFR+LTEISV+HC+ SEV +  A+Q SP Q  +LSF+A+D+YAKLV S+
Sbjct: 1929 GLLKGDDMTDRFFRLLTEISVAHCLSSEVINSGALQSSPQQIQNLSFLAIDIYAKLVFSI 1988

Query: 21   LK 16
            LK
Sbjct: 1989 LK 1990


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -1

Query: 195  GLLKDIDFSEHFFRILTEISVSHCIS-EVPSPLAMQSPNQ*LHLSFIAVDMYAKLVSSLL 19
            GLLK  + ++ FFR+L E+SV+HC+S EV +   +QSP+Q  +LSF+A+D+YAKLV ++L
Sbjct: 1883 GLLKGDETTDRFFRVLMELSVAHCLSSEVINSSVLQSPHQMQNLSFLAIDIYAKLVIAIL 1942

Query: 18   K 16
            K
Sbjct: 1943 K 1943


>gb|AAO22642.1| unknown protein [Arabidopsis thaliana]
          Length = 682

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = -1

Query: 195 GLLKDIDFSEHFFRILTEISVSHCI-SEVPSPLAMQSPNQ*LHLSFIAVDMYAKLVSSLL 19
           GLLK  D +E FFRIL E+SV+HCI SE  +  A+QSP Q    SF+ +DMYAKLV S+L
Sbjct: 190 GLLKGDDTTESFFRILLELSVAHCISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSIL 249

Query: 18  KH 13
           K+
Sbjct: 250 KY 251


>ref|NP_001184889.1| CCR4-NOT transcription complex subunit 1 [Arabidopsis thaliana]
            gi|332189257|gb|AEE27378.1| CCR4-NOT transcription
            complex subunit 1 [Arabidopsis thaliana]
          Length = 2377

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = -1

Query: 195  GLLKDIDFSEHFFRILTEISVSHCI-SEVPSPLAMQSPNQ*LHLSFIAVDMYAKLVSSLL 19
            GLLK  D +E FFRIL E+SV+HCI SE  +  A+QSP Q    SF+ +DMYAKLV S+L
Sbjct: 1885 GLLKGDDTTESFFRILLELSVAHCISSEDINSGAVQSPQQPQSPSFLIIDMYAKLVFSIL 1944

Query: 18   KH 13
            K+
Sbjct: 1945 KY 1946