BLASTX nr result

ID: Coptis25_contig00010227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010227
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39026.3| unnamed protein product [Vitis vinifera]               99   4e-19
emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]    99   4e-19
ref|XP_002894563.1| predicted protein [Arabidopsis lyrata subsp....    97   1e-18
ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...    95   7e-18

>emb|CBI39026.3| unnamed protein product [Vitis vinifera]
          Length = 1037

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = -3

Query: 255 LLSIICAFTILYLRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGGFG 76
           ++S+I   ++LY++RK S             RPNTFSY+ELRTAT DFN  NKLGEGGFG
Sbjct: 652 VVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGFG 711

Query: 75  PVYKGMLSDGREVAVKKLLVTSHQG 1
           PVYKG L+DGR VAVK+L V S QG
Sbjct: 712 PVYKGTLNDGRVVAVKQLSVASQQG 736


>emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]
          Length = 612

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = -3

Query: 255 LLSIICAFTILYLRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGGFG 76
           ++S+I   ++LY++RK S             RPNTFSY+ELRTAT DFN  NKLGEGGFG
Sbjct: 227 VVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRTATEDFNPANKLGEGGFG 286

Query: 75  PVYKGMLSDGREVAVKKLLVTSHQG 1
           PVYKG L+DGR VAVK+L V S QG
Sbjct: 287 PVYKGTLNDGRVVAVKQLSVASQQG 311


>ref|XP_002894563.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340405|gb|EFH70822.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2002

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/85 (57%), Positives = 60/85 (70%)
 Frame = -3

Query: 255 LLSIICAFTILYLRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGGFG 76
           +LSI+    IL++RRKR              RP TFSY+ELRTAT DF+ +NKLGEGGFG
Sbjct: 640 MLSILVIAIILFIRRKRKRAADEEVLNSLHIRPYTFSYSELRTATQDFDPSNKLGEGGFG 699

Query: 75  PVYKGMLSDGREVAVKKLLVTSHQG 1
           PV+KG L+DGRE+AVK+L V S QG
Sbjct: 700 PVFKGKLNDGREIAVKQLSVASRQG 724



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = -3

Query: 255  LLSIICAFTILYLRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGGFG 76
            LLSI     I  +R++R              +P TF+Y+EL++AT DF+ +NKLGEGGFG
Sbjct: 1586 LLSIFAGVVIFIIRKRRKRYTDDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFG 1645

Query: 75   PVYKGMLSDGREVAVKKLLVTSHQG 1
            PVYKG L+DGRE+AVK L V S QG
Sbjct: 1646 PVYKGKLNDGREIAVKLLSVGSRQG 1670


>ref|XP_002297945.1| predicted protein [Populus trichocarpa] gi|222845203|gb|EEE82750.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/85 (58%), Positives = 62/85 (72%)
 Frame = -3

Query: 255 LLSIICAFTILYLRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGGFG 76
           ++S+I    +LY+R K+              RPNTFSY++LRTAT DF+ +NKLGEGG+G
Sbjct: 649 VVSLILISVLLYIRLKKDSEDEEVLLGMGP-RPNTFSYSQLRTATEDFSPSNKLGEGGYG 707

Query: 75  PVYKGMLSDGREVAVKKLLVTSHQG 1
           PVYKGMLSDGREVAVKKL V S+QG
Sbjct: 708 PVYKGMLSDGREVAVKKLSVASNQG 732


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
 Frame = -3

Query: 255 LLSIICAFTILY--LRRKRSXXXXXXXXXXXXNRPNTFSYTELRTATGDFNLTNKLGEGG 82
           L+  +  F++ Y  LRRK+              RP TFSY EL+ ATGDF+ +NKLGEGG
Sbjct: 647 LVCFLAVFSVYYFVLRRKKPYENQDEELLGMEARPYTFSYAELKNATGDFSPSNKLGEGG 706

Query: 81  FGPVYKGMLSDGREVAVKKLLVTSHQG 1
           FGPVYKG LSDGR VAVK+L V+SHQG
Sbjct: 707 FGPVYKGTLSDGRVVAVKQLSVSSHQG 733


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