BLASTX nr result

ID: Coptis25_contig00010222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010222
         (1779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   342   e-179
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   342   e-179
ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   335   e-178
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   339   e-178
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   328   e-175

>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
            vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
            product [Vitis vinifera]
          Length = 603

 Score =  342 bits (878), Expect(2) = e-179
 Identities = 167/204 (81%), Positives = 178/204 (87%)
 Frame = +3

Query: 717  EAKFSNHGADTPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVC 896
            EAKFS  GAD PGKRQLLCVANTH+NVHQ+LKDVKLWQVHTLLKGLEKIAASADIPMLVC
Sbjct: 400  EAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVC 459

Query: 897  GDFSSVPGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPLVSAYSLFARMGIG 1076
            GDF+SVPGSAPHALLAMGKVD  HPDL +DPL I+RPASK+THQLPLVSAYS FARMG+G
Sbjct: 460  GDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMGVG 519

Query: 1077 IGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADSXXXXXXXXXXXXXXXRKDTAL 1256
            IGLEQQRRR+D +TNEPLFT+CTRDFIGT DYIFYTADS               RKDTAL
Sbjct: 520  IGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRKDTAL 579

Query: 1257 PSPEWSSDHIALLAEFRCMPKTRR 1328
            PSPEWSSDHIALLAEFRC P+TRR
Sbjct: 580  PSPEWSSDHIALLAEFRCKPRTRR 603



 Score =  315 bits (807), Expect(2) = e-179
 Identities = 152/205 (74%), Positives = 176/205 (85%)
 Frame = +1

Query: 1   KFECVSFDAEKKLPVGHANTILTSXXXXXXXXXXXXXXXXNGVDVMGNLDLDGRTASSGT 180
           KFECV  DAE KL VGH + ILTS                +GVD++G+LD DGR +S+GT
Sbjct: 193 KFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGT 252

Query: 181 FTVLSYNILSDVYASNDLYSYCPSWALSWAYRRQNLLREIVGYRADILCLQEVQSDHFEE 360
           FTVLSYNILSDV+A+++LYSYCPSWALSW YR+QNLLREIVGYRADI+CLQE+QSDHFEE
Sbjct: 253 FTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEE 312

Query: 361 FFAPELEKYGYQALFKKKTTEVYSGTIYAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 540
           FFAPEL+K+GYQAL+K+KT EVY+G I+ +DGCATFFRRDRFSHVKKYEVEFNKAAQSLT
Sbjct: 313 FFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 372

Query: 541 EAVVPTHQKKTALNRLLKDNVALIA 615
           +AVVP+ QKKTALNRL+KDNVALIA
Sbjct: 373 DAVVPSAQKKTALNRLVKDNVALIA 397


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  342 bits (878), Expect(2) = e-179
 Identities = 167/204 (81%), Positives = 178/204 (87%)
 Frame = +3

Query: 717  EAKFSNHGADTPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVC 896
            EAKFS  GAD PGKRQLLCVANTH+NVHQ+LKDVKLWQVHTLLKGLEKIAASADIPMLVC
Sbjct: 400  EAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVC 459

Query: 897  GDFSSVPGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPLVSAYSLFARMGIG 1076
            GDF+SVPGSAPHALLAMGKVD  HPDL +DPL I+RPASK+THQLPLVSAYS FARMG+G
Sbjct: 460  GDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMGVG 519

Query: 1077 IGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADSXXXXXXXXXXXXXXXRKDTAL 1256
            IGLEQQRRR+D +TNEPLFT+CTRDFIGT DYIFYTADS               RKDTAL
Sbjct: 520  IGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRKDTAL 579

Query: 1257 PSPEWSSDHIALLAEFRCMPKTRR 1328
            PSPEWSSDHIALLAEFRC P+TRR
Sbjct: 580  PSPEWSSDHIALLAEFRCKPRTRR 603



 Score =  315 bits (807), Expect(2) = e-179
 Identities = 152/205 (74%), Positives = 176/205 (85%)
 Frame = +1

Query: 1   KFECVSFDAEKKLPVGHANTILTSXXXXXXXXXXXXXXXXNGVDVMGNLDLDGRTASSGT 180
           KFECV  DAE KL VGH + ILTS                +GVD++G+LD DGR +S+GT
Sbjct: 193 KFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGT 252

Query: 181 FTVLSYNILSDVYASNDLYSYCPSWALSWAYRRQNLLREIVGYRADILCLQEVQSDHFEE 360
           FTVLSYNILSDV+A+++LYSYCPSWALSW YR+QNLLREIVGYRADI+CLQE+QSDHFEE
Sbjct: 253 FTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEE 312

Query: 361 FFAPELEKYGYQALFKKKTTEVYSGTIYAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 540
           FFAPEL+K+GYQAL+K+KT EVY+G I+ +DGCATFFRRDRFSHVKKYEVEFNKAAQSLT
Sbjct: 313 FFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 372

Query: 541 EAVVPTHQKKTALNRLLKDNVALIA 615
           +AVVP+ QKKTALNRL+KDNVALIA
Sbjct: 373 DAVVPSAQKKTALNRLVKDNVALIA 397


>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
            gi|223529240|gb|EEF31213.1| carbon catabolite repressor
            protein, putative [Ricinus communis]
          Length = 603

 Score =  335 bits (858), Expect(2) = e-178
 Identities = 163/204 (79%), Positives = 174/204 (85%)
 Frame = +3

Query: 717  EAKFSNHGADTPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVC 896
            EAKFSN GAD PGKRQLLCVANTHVN+H DLKDVKLWQV TLLKGLEKIAASADIPMLVC
Sbjct: 400  EAKFSNQGADNPGKRQLLCVANTHVNIHHDLKDVKLWQVLTLLKGLEKIAASADIPMLVC 459

Query: 897  GDFSSVPGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPLVSAYSLFARMGIG 1076
            GDF+S+PGSAPH+LLAMGKVD  HPDL +DPL I+RP SK+THQLPLVSAYS FAR+G+G
Sbjct: 460  GDFNSMPGSAPHSLLAMGKVDPLHPDLVIDPLGILRPHSKLTHQLPLVSAYSSFARLGVG 519

Query: 1077 IGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADSXXXXXXXXXXXXXXXRKDTAL 1256
            +GLEQQRRRMD  TNEPLFTNCTRDFIGT DYIFYTADS               RKDTAL
Sbjct: 520  LGLEQQRRRMDPATNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRKDTAL 579

Query: 1257 PSPEWSSDHIALLAEFRCMPKTRR 1328
            PSPEWSSDHIALLAEFRC P+ RR
Sbjct: 580  PSPEWSSDHIALLAEFRCKPRPRR 603



 Score =  320 bits (819), Expect(2) = e-178
 Identities = 156/204 (76%), Positives = 174/204 (85%)
 Frame = +1

Query: 1   KFECVSFDAEKKLPVGHANTILTSXXXXXXXXXXXXXXXXNGVDVMGNLDLDGRTASSGT 180
           KFECV  DAE KLPVGH NTILTS                +G+DVMG+LD DGR +SSGT
Sbjct: 193 KFECVVVDAESKLPVGHPNTILTSRVIPAPSPTPRRLIPVSGIDVMGHLDSDGRISSSGT 252

Query: 181 FTVLSYNILSDVYASNDLYSYCPSWALSWAYRRQNLLREIVGYRADILCLQEVQSDHFEE 360
           FTVLSYNILSDVYA+++ YSYCPSWALSW YRRQNLLREIVGYRADI+CLQEVQ+DH+EE
Sbjct: 253 FTVLSYNILSDVYATSETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQNDHYEE 312

Query: 361 FFAPELEKYGYQALFKKKTTEVYSGTIYAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 540
           FFAPEL+K+GYQAL+K+KT EVYSG    +DGCATFFRRDRFSHVKKYEVEFNKAAQSLT
Sbjct: 313 FFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 372

Query: 541 EAVVPTHQKKTALNRLLKDNVALI 612
           EAVVP+ Q+KTALNRL+KDNVALI
Sbjct: 373 EAVVPSAQRKTALNRLVKDNVALI 396


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
            unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  339 bits (869), Expect(2) = e-178
 Identities = 166/204 (81%), Positives = 176/204 (86%)
 Frame = +3

Query: 717  EAKFSNHGADTPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVC 896
            EAKFSN GAD PGKRQLLCVANTH+NVHQDLKDVKLWQV TLLKGLEKIAASADIPMLVC
Sbjct: 400  EAKFSNQGADNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPMLVC 459

Query: 897  GDFSSVPGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPLVSAYSLFARMGIG 1076
            GDF+SVPGSAPH+LLAMGKVDQ HPDL VDPL I+RP SK+THQLPLVSAYS FAR+G+G
Sbjct: 460  GDFNSVPGSAPHSLLAMGKVDQLHPDLVVDPLGILRPHSKLTHQLPLVSAYSSFARVGVG 519

Query: 1077 IGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADSXXXXXXXXXXXXXXXRKDTAL 1256
            +G +QQRRRMD TTNEPLFTNCTRDFIGT DYIFYTADS               RKDTAL
Sbjct: 520  LGSDQQRRRMDATTNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRKDTAL 579

Query: 1257 PSPEWSSDHIALLAEFRCMPKTRR 1328
            PSPEWSSDHIALLAEFRC P+ RR
Sbjct: 580  PSPEWSSDHIALLAEFRCKPRPRR 603



 Score =  313 bits (802), Expect(2) = e-178
 Identities = 152/204 (74%), Positives = 172/204 (84%)
 Frame = +1

Query: 1   KFECVSFDAEKKLPVGHANTILTSXXXXXXXXXXXXXXXXNGVDVMGNLDLDGRTASSGT 180
           KFECV  DAE KLPVGH+NT+LTS                +G+D M  LD DGR +SSGT
Sbjct: 193 KFECVVVDAETKLPVGHSNTLLTSRVIPAPSPTPRRLISVSGLDAMAPLDSDGRISSSGT 252

Query: 181 FTVLSYNILSDVYASNDLYSYCPSWALSWAYRRQNLLREIVGYRADILCLQEVQSDHFEE 360
           FTVLSYNILSDVYA+ND YSYCPSWALSW YRRQNLLREIVGYRADI+CLQEVQSDH+EE
Sbjct: 253 FTVLSYNILSDVYATNDTYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEE 312

Query: 361 FFAPELEKYGYQALFKKKTTEVYSGTIYAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 540
           FFAPEL+K+GYQAL+K+KT EVY+   + +DGCATFFRRDRFSHVKKYEVEFNKAAQSLT
Sbjct: 313 FFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 372

Query: 541 EAVVPTHQKKTALNRLLKDNVALI 612
           +A+VP+ Q+KTALNRL+KDNVALI
Sbjct: 373 DALVPSAQRKTALNRLVKDNVALI 396


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
            predicted protein [Populus trichocarpa]
          Length = 602

 Score =  328 bits (842), Expect(2) = e-175
 Identities = 161/204 (78%), Positives = 172/204 (84%)
 Frame = +3

Query: 717  EAKFSNHGADTPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVC 896
            EAKFSN G D PGKRQLLCVANTH+NVHQDLKDVKLWQV TLLKGLEKIAASADIPMLVC
Sbjct: 399  EAKFSNQGVDNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPMLVC 458

Query: 897  GDFSSVPGSAPHALLAMGKVDQSHPDLTVDPLQIVRPASKITHQLPLVSAYSLFARMGIG 1076
            GDF+SVPGSAPH+LLAMGKVD  HPDL VDPL I+RP +K+THQLPLVSAYS FAR+G+G
Sbjct: 459  GDFNSVPGSAPHSLLAMGKVDPLHPDLVVDPLGILRPHNKLTHQLPLVSAYSSFARVGVG 518

Query: 1077 IGLEQQRRRMDTTTNEPLFTNCTRDFIGTNDYIFYTADSXXXXXXXXXXXXXXXRKDTAL 1256
            +G +QQRRRMD TTNEPLFTNCTRDFIG  DYIFYTADS               RKDTAL
Sbjct: 519  LGSDQQRRRMDATTNEPLFTNCTRDFIGALDYIFYTADSLMVESLLELLDEESLRKDTAL 578

Query: 1257 PSPEWSSDHIALLAEFRCMPKTRR 1328
            PSPEWSSDHIALLAEFRC  + RR
Sbjct: 579  PSPEWSSDHIALLAEFRCKNRPRR 602



 Score =  315 bits (806), Expect(2) = e-175
 Identities = 152/204 (74%), Positives = 173/204 (84%)
 Frame = +1

Query: 1   KFECVSFDAEKKLPVGHANTILTSXXXXXXXXXXXXXXXXNGVDVMGNLDLDGRTASSGT 180
           KFECV  DAE KLPVGH NT+LTS                +G+D M  LDLDGR +S+GT
Sbjct: 192 KFECVVVDAETKLPVGHPNTLLTSRVIPAPSPTPRRLIPVSGLDAMVPLDLDGRISSTGT 251

Query: 181 FTVLSYNILSDVYASNDLYSYCPSWALSWAYRRQNLLREIVGYRADILCLQEVQSDHFEE 360
           FTVLSYNILSDVYA+N+ YSYCPSWALSW YRRQNLLREIVGYRADI+CLQEVQSDH+EE
Sbjct: 252 FTVLSYNILSDVYATNETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEE 311

Query: 361 FFAPELEKYGYQALFKKKTTEVYSGTIYAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 540
           FFAPEL+K+GYQAL+K+KT EVY+G  + +DGCATFFRRDRFSHVKKYEVEFNKAAQSLT
Sbjct: 312 FFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLT 371

Query: 541 EAVVPTHQKKTALNRLLKDNVALI 612
           +A+VP+ Q+KTALNRL+KDNVALI
Sbjct: 372 DALVPSAQRKTALNRLVKDNVALI 395


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