BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010221
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   296   3e-78
ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group] g...   279   4e-73
ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homo...   278   5e-73
ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homo...   278   9e-73
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   278   9e-73

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  296 bits (757), Expect = 3e-78
 Identities = 142/194 (73%), Positives = 168/194 (86%), Gaps = 1/194 (0%)
 Frame = +1

Query: 85  MLEIKTPKNVKAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKY 261
           ML+IKTPK+ KAKRE++KRAPKLVE+GKKTLIL   KTSN+LN VLTEI+HLK+ SA++Y
Sbjct: 1   MLKIKTPKSGKAKREIEKRAPKLVESGKKTLILQGTKTSNVLNAVLTEIYHLKKDSAVRY 60

Query: 262 SRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVG 441
           +RKN+NIRPFE+GGETSLEFFS KTDCS+FVFGSHSKKRPDNLV+GRTYDHH+YDLVEVG
Sbjct: 61  TRKNENIRPFESGGETSLEFFSLKTDCSIFVFGSHSKKRPDNLVIGRTYDHHIYDLVEVG 120

Query: 442 VENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNL 621
           VENF+SM S++YDKK++PKVG+KPF AFIGEGF              DL RGEV+ENLNL
Sbjct: 121 VENFKSMESFTYDKKLSPKVGSKPFIAFIGEGFESVDELKHLKEVLLDLLRGEVVENLNL 180

Query: 622 AGVDRVFVCTAVSS 663
           AG+D  ++CTAVSS
Sbjct: 181 AGLDHAYICTAVSS 194


>ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group]
           gi|18202717|sp|Q9AWM9.1|RPF2_ORYSJ RecName:
           Full=Ribosome production factor 2 homolog; AltName:
           Full=Brix domain-containing protein 1 homolog; AltName:
           Full=Ribosome biogenesis protein RPF2 homolog
           gi|13161376|dbj|BAB32971.1| brix domain containing
           protein 1 (33.5 kD)-like protein [Oryza sativa Japonica
           Group] gi|113532716|dbj|BAF05099.1| Os01g0513800 [Oryza
           sativa Japonica Group] gi|125526163|gb|EAY74277.1|
           hypothetical protein OsI_02165 [Oryza sativa Indica
           Group] gi|125570593|gb|EAZ12108.1| hypothetical protein
           OsJ_01990 [Oryza sativa Japonica Group]
           gi|215704732|dbj|BAG94760.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 310

 Score =  279 bits (713), Expect = 4e-73
 Identities = 136/190 (71%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = +1

Query: 94  IKTPKNVKAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKYSRK 270
           I+ P++ +AKREL K APKLVE GKKTLIL   KTS +LN+VL ++FHLKR +A+KYS+K
Sbjct: 5   IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64

Query: 271 NDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVGVEN 450
           NDNIRPFE+GGETSLEFFS KTDCSL V+GSHSKKRP+NLVLGRTYDHH+YDLVEVGVEN
Sbjct: 65  NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124

Query: 451 FRSMNSYSYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGV 630
           ++S+ SY YDKK+APK+G+KPFFAFIGE F              DLF+GEV+ENLNLAGV
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184

Query: 631 DRVFVCTAVS 660
           DRVFVCTA+S
Sbjct: 185 DRVFVCTAIS 194


>ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  278 bits (712), Expect = 5e-73
 Identities = 135/193 (69%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = +1

Query: 85  MLEIKTPKNVKAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKY 261
           MLEIKT K  K KREL+KRAPKLVE+GKKTLIL   KTS +LN VL +I+HLK+  A+KY
Sbjct: 1   MLEIKTAKTRKGKRELEKRAPKLVESGKKTLILHGTKTSGVLNAVLAQIYHLKKDCAVKY 60

Query: 262 SRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVG 441
           SR+N+N++PFE GGETSLEFFS KTDCS+FV+GSHSKKRPDNLV+GRTYDHH+YDLVEVG
Sbjct: 61  SRRNENVKPFEAGGETSLEFFSLKTDCSIFVYGSHSKKRPDNLVIGRTYDHHIYDLVEVG 120

Query: 442 VENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNL 621
           VENF+ M S+SYDKK+APK G+KPF  FIGEGF              DL RGEV+ENLNL
Sbjct: 121 VENFKPMESFSYDKKLAPKEGSKPFIVFIGEGFEAVEELKHLKEVLLDLLRGEVVENLNL 180

Query: 622 AGVDRVFVCTAVS 660
           AGVDR +VC A+S
Sbjct: 181 AGVDRAYVCAALS 193


>ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  278 bits (710), Expect = 9e-73
 Identities = 135/193 (69%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
 Frame = +1

Query: 85  MLEIKTPKNVKAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKY 261
           MLEIKT K  K KREL+KRAPKLVE+GKKTLIL   KTS +LN VL +I+HLK+ SA+KY
Sbjct: 1   MLEIKTAKTRKGKRELEKRAPKLVESGKKTLILHGTKTSGVLNAVLAQIYHLKKDSAVKY 60

Query: 262 SRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVG 441
           SRKN+N++PFE GGETSLEFFS KTDCS+FV+GSHSKKRPDNLV+GRTYDHH++DLVEVG
Sbjct: 61  SRKNENVKPFEAGGETSLEFFSLKTDCSVFVYGSHSKKRPDNLVIGRTYDHHIFDLVEVG 120

Query: 442 VENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNL 621
           VENF+ M S+SY+KK+APK G+KPF  FIGEGF              DL RGEV+ENLNL
Sbjct: 121 VENFKPMESFSYNKKLAPKEGSKPFIVFIGEGFEAVEELKHLKEVLLDLLRGEVVENLNL 180

Query: 622 AGVDRVFVCTAVS 660
           AGVDR +VC A+S
Sbjct: 181 AGVDRAYVCAALS 193


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  278 bits (710), Expect = 9e-73
 Identities = 134/194 (69%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
 Frame = +1

Query: 85  MLEIKTPKNVKAKRELDKRAPKLVENGKKTLIL-AAKTSNLLNTVLTEIFHLKRGSAIKY 261
           ML+IK P   + KR L+KRAPKLVE GKKTLIL   KTS++LN+VLT+I+HLK+ SAI+Y
Sbjct: 1   MLKIKAPVKPRIKRALEKRAPKLVETGKKTLILEGTKTSSVLNSVLTDIYHLKKESAIRY 60

Query: 262 SRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLVLGRTYDHHVYDLVEVG 441
           +RKNDNIRPFE+GGETSLEFFS+KTDCS+FV+GS SKKRPDNLV+GRTYDHH+YDLVEVG
Sbjct: 61  TRKNDNIRPFESGGETSLEFFSEKTDCSIFVYGSTSKKRPDNLVIGRTYDHHIYDLVEVG 120

Query: 442 VENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNL 621
           +ENF+SM+S+ YDKK AP VG+KPF AF+GEGF              DL RGE +ENLNL
Sbjct: 121 IENFKSMSSFKYDKKAAPHVGSKPFIAFVGEGFESVDELKHLKEVLLDLLRGEAVENLNL 180

Query: 622 AGVDRVFVCTAVSS 663
           AG+DR +VCTA SS
Sbjct: 181 AGLDRAYVCTATSS 194