BLASTX nr result

ID: Coptis25_contig00010212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010212
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150170.1| PREDICTED: vacuolar protein sorting-associat...    97   2e-18
ref|XP_002333205.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_004164358.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar pro...    95   7e-18
ref|XP_002282053.1| PREDICTED: vacuolar protein sorting-associat...    94   9e-18
emb|CAN78511.1| hypothetical protein VITISV_037747 [Vitis vinifera]    94   9e-18

>ref|XP_004150170.1| PREDICTED: vacuolar protein sorting-associated protein 55 homolog
           [Cucumis sativus]
          Length = 138

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/63 (71%), Positives = 54/63 (85%)
 Frame = -2

Query: 309 WEDATKFLTGFSAVGSIAIPIILKHADIIGWGALIMELSSFSIFVFAILCFVQMSKESEY 130
           W +ATKFLTG S VGSIAIP+ILKHA IIGWGA+ M+LSSF +FV AILCF+ MS++ +Y
Sbjct: 76  WINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMDLSSFVVFVVAILCFMGMSEDDDY 135

Query: 129 SMF 121
           SMF
Sbjct: 136 SMF 138


>ref|XP_002333205.1| predicted protein [Populus trichocarpa]
           gi|224138848|ref|XP_002326705.1| predicted protein
           [Populus trichocarpa] gi|222834027|gb|EEE72504.1|
           predicted protein [Populus trichocarpa]
           gi|222835094|gb|EEE73543.1| predicted protein [Populus
           trichocarpa]
          Length = 139

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = -2

Query: 309 WEDATKFLTGFSAVGSIAIPIILKHADIIGWGALIMELSSFSIFVFAILCFVQMSKESEY 130
           W +ATKFLTG SA+GSIAIP+ILKHA +IGWGAL MELSSF +FV AI+C++ MS + +Y
Sbjct: 77  WVNATKFLTGASAIGSIAIPVILKHAGVIGWGALAMELSSFFVFVIAIMCYIGMSDDDDY 136

Query: 129 SM 124
           SM
Sbjct: 137 SM 138


>ref|XP_004164358.1| PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated
           protein 55 homolog [Cucumis sativus]
          Length = 138

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = -2

Query: 309 WEDATKFLTGFSAVGSIAIPIILKHADIIGWGALIMELSSFSIFVFAILCFVQMSKESEY 130
           W +ATKFLTG S VGSIAIP+ILKHA IIGWG + M+LSSF +FV AILCF+ MS++ +Y
Sbjct: 76  WINATKFLTGASTVGSIAIPVILKHAGIIGWGXMAMDLSSFVVFVVAILCFMGMSEDDDY 135

Query: 129 SMF 121
           SMF
Sbjct: 136 SMF 138


>ref|XP_002282053.1| PREDICTED: vacuolar protein sorting-associated protein 55 homolog
           [Vitis vinifera] gi|297742157|emb|CBI33944.3| unnamed
           protein product [Vitis vinifera]
          Length = 138

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = -2

Query: 309 WEDATKFLTGFSAVGSIAIPIILKHADIIGWGALIMELSSFSIFVFAILCFVQMSKESEY 130
           W DATKFLTG SAVGSIAIP ILKHA +IGWGAL +ELSSF + V AI+C++QM+ ++EY
Sbjct: 76  WVDATKFLTGASAVGSIAIPAILKHAGVIGWGALALELSSFFVIVVAIMCYIQMNSDNEY 135

Query: 129 SM 124
            M
Sbjct: 136 RM 137


>emb|CAN78511.1| hypothetical protein VITISV_037747 [Vitis vinifera]
          Length = 130

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = -2

Query: 309 WEDATKFLTGFSAVGSIAIPIILKHADIIGWGALIMELSSFSIFVFAILCFVQMSKESEY 130
           W DATKFLTG SAVGSIAIP ILKHA +IGWGAL +ELSSF + V AI+C++QM+ ++EY
Sbjct: 68  WVDATKFLTGASAVGSIAIPAILKHAGVIGWGALALELSSFFVIVVAIMCYIQMNSDNEY 127

Query: 129 SM 124
            M
Sbjct: 128 RM 129


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