BLASTX nr result

ID: Coptis25_contig00010209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010209
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31582.3| unnamed protein product [Vitis vinifera]              144   5e-32
ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...   144   5e-32
emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]   143   8e-32
ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2...   136   1e-29
emb|CBI30464.3| unnamed protein product [Vitis vinifera]              128   2e-27

>emb|CBI31582.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  144 bits (362), Expect = 5e-32
 Identities = 80/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
 Frame = -3

Query: 881 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAIFLXXXXXXXXXXXXG 717
           H  R++   +GR  RPLGLP SAWPPLQ+Q      Q+ SGMRA+FL            G
Sbjct: 91  HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 150

Query: 716 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 546
           VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +   
Sbjct: 151 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 208

Query: 545 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 456
               N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 209 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 241


>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score =  144 bits (362), Expect = 5e-32
 Identities = 80/153 (52%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
 Frame = -3

Query: 881 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ-----SQNGSGMRAIFLXXXXXXXXXXXXG 717
           H  R++   +GR  RPLGLP SAWPPLQ+Q      Q+ SGMRA+FL            G
Sbjct: 267 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSSSGMRAVFLGGSGLKRESAGTG 326

Query: 716 VFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF--- 546
           VFLPRR G AS+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +   
Sbjct: 327 VFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEAL 384

Query: 545 ---GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 456
               N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 385 MARRNALISQQKRNLRPEGTMNHEIRLPQEWTY 417


>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score =  143 bits (360), Expect = 8e-32
 Identities = 79/151 (52%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
 Frame = -3

Query: 881 HGGRALAFGNGRSTRPLGLPQSAWPPLQNQ---SQNGSGMRAIFLXXXXXXXXXXXXGVF 711
           H  R++   +GR  RPLGLP SAWPPLQ+Q    Q+ SGMRA+FL            GVF
Sbjct: 277 HSRRSVGLESGRCGRPLGLPPSAWPPLQHQHQHQQSSSGMRAVFLGGSGLKRESAGTGVF 336

Query: 710 LPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGFHGGF----- 546
           LPRR G  S+SRKKPGCSTVL+PARVVQALNLNF+D+G     QP F  G    +     
Sbjct: 337 LPRRFGNXSDSRKKPGCSTVLLPARVVQALNLNFEDMGS--HSQPHFNGGVAPDYEALMA 394

Query: 545 -GNSHFPQPKRSYRPQPAINTEVQLPQEWTY 456
             N+   Q KR+ RP+  +N E++LPQEWTY
Sbjct: 395 RRNALISQQKRNLRPEXTMNHEIRLPQEWTY 425


>ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  136 bits (342), Expect = 1e-29
 Identities = 83/186 (44%), Positives = 103/186 (55%), Gaps = 17/186 (9%)
 Frame = -3

Query: 962 REQISNVWGRXXXXXXXXXXXXXXQLAHG-----GRALAFGNGRSTRPLGLPQSAWPPLQ 798
           R+Q S++W R              Q  H      GR + + +GR  RPLGLPQSAWPPLQ
Sbjct: 231 RQQCSSIWERQQVKTSWQAQPQFHQHQHQQVQSRGRDVRYEDGRCGRPLGLPQSAWPPLQ 290

Query: 797 ----NQSQNGSGMRAIFLXXXXXXXXXXXXGVFLPRRNGVASESRKKPGCSTVLVPARVV 630
               NQ  N +GMRA+FL            GVFLPRR G   + +KK GCSTVL+PA+VV
Sbjct: 291 VHPQNQHSNSAGMRAVFLGGSGVKRECAGTGVFLPRRYGNPPDPKKKSGCSTVLLPAKVV 350

Query: 629 QALNLNFDDLGGGVQQQPRF--VAGFHGGFG------NSHFPQPKRSYRPQPAINTEVQL 474
           QALNLNFDD+      QPR    A FH  +       N+   Q KR+ R +  +N E++L
Sbjct: 351 QALNLNFDDMDISGLAQPRLNNNASFHSEYDALMARRNALLAQQKRNLRQENVLNREIRL 410

Query: 473 PQEWTY 456
           PQEWTY
Sbjct: 411 PQEWTY 416


>emb|CBI30464.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  128 bits (322), Expect = 2e-27
 Identities = 85/222 (38%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
 Frame = -3

Query: 1073 KNSTTNVGFYPNYSXXXXXXXXXXXXXXXXXXXXXXQREQISNVWGRXXXXXXXXXXXXX 894
            KN+ T+ GFY N S                       +++   VWG              
Sbjct: 171  KNANTDAGFYSNRSVSHQQFQATQFQQLKQQQMM---KQRPQAVWG-GQQQKGTGLYQPQ 226

Query: 893  XQLAHGGRALAFGNGRSTRPLGLPQSAWPPLQNQSQN------GSGMRAIFLXXXXXXXX 732
              + + G++   G  RS RPLGL  SAWPPLQ Q Q       GSGMR +FL        
Sbjct: 227  QVIQNRGKSNEVGINRSNRPLGLSLSAWPPLQAQQQQQQPQQGGSGMRVVFLGTHGSRKE 286

Query: 731  XXXXGVFLPRRNGVASESRKKPGCSTVLVPARVVQALNLNFDDLGGGVQQQPRFVAGF-- 558
                GVFLPRR G   E RKK GCST L+PARVVQALNL  DD+G   Q  PRF   F  
Sbjct: 287  CAGTGVFLPRRVGNPPEMRKKSGCSTALLPARVVQALNLKLDDVGSQTQLHPRFNGSFAP 346

Query: 557  --------HGGFGNSHFPQPKRSYRPQPAINTEVQLPQEWTY 456
                       +G +   + +R++R QP +N E++LPQEWTY
Sbjct: 347  DVDAAVKLRSSYGFA--CEQRRAFRAQPVMNHEIRLPQEWTY 386


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