BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010206
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   135   3e-30
emb|CBX33211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Be...   129   3e-28
ref|YP_005090477.1| NADH dehydrogenase subunit 2 (mitochondrion)...   129   3e-28
ref|YP_005090433.1| NADH dehydrogenase subunit 2 (mitochondrion)...   129   3e-28
dbj|BAD83439.2| NADH dehydrogenase subunit 2 (mitochondrion) [Ni...   129   3e-28

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
            gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
            [Medicago truncatula]
          Length = 1094

 Score =  135 bits (341), Expect = 3e-30
 Identities = 80/143 (55%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
 Frame = -1

Query: 455  SGFLFRLDKEEKNPIENAPNP----FVEPCIVSDPNLPGASPP*RQVKLVSRMMGNYLLR 288
            S F+      + N IEN PNP    FVEPCIV        + P  Q+ + +   G     
Sbjct: 979  SFFVLHFSSRKNNNIENVPNPPTLSFVEPCIVI------RTCPETQLLVSTPFRGG---- 1028

Query: 287  FGEDSAVS*YPLGFGVDPFTLFYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFI 108
                             PFTLFYYIRL KRMFFDTPRTWILYEPMDRDKSLLLAMTSSFI
Sbjct: 1029 -----------------PFTLFYYIRLAKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFI 1071

Query: 107  TLFFLYPSPLFSVTHQMALSLYL 39
            T  F YPSPLFSVTHQMALS YL
Sbjct: 1072 TSSFPYPSPLFSVTHQMALSSYL 1094


>emb|CBX33211.1| NADH dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris subsp.
           maritima] gi|384977889|emb|CBL54111.1| NADH
           dehydrogenase subunit 2 (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 488

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = -1

Query: 224 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 45
           FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL
Sbjct: 427 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 486

Query: 44  YL 39
           YL
Sbjct: 487 YL 488


>ref|YP_005090477.1| NADH dehydrogenase subunit 2 (mitochondrion) [Lotus japonicus]
           gi|357197341|gb|AET62937.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Lotus japonicus]
          Length = 488

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = -1

Query: 224 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 45
           FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL
Sbjct: 427 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 486

Query: 44  YL 39
           YL
Sbjct: 487 YL 488


>ref|YP_005090433.1| NADH dehydrogenase subunit 2 (mitochondrion) [Millettia pinnata]
           gi|357197296|gb|AET62893.1| NADH dehydrogenase subunit 2
           (mitochondrion) [Millettia pinnata]
          Length = 488

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = -1

Query: 224 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 45
           FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL
Sbjct: 427 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 486

Query: 44  YL 39
           YL
Sbjct: 487 YL 488


>dbj|BAD83439.2| NADH dehydrogenase subunit 2 (mitochondrion) [Nicotiana tabacum]
          Length = 488

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = -1

Query: 224 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 45
           FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL
Sbjct: 427 FYYIRLVKRMFFDTPRTWILYEPMDRDKSLLLAMTSSFITLFFLYPSPLFSVTHQMALSL 486

Query: 44  YL 39
           YL
Sbjct: 487 YL 488