BLASTX nr result

ID: Coptis25_contig00010204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010204
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523303.1| ATP binding protein, putative [Ricinus commu...   209   2e-52
ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose py...   203   1e-50
ref|XP_003520879.1| PREDICTED: bifunctional fucokinase/fucose py...   202   2e-50
emb|CBI40584.3| unnamed protein product [Vitis vinifera]              199   1e-49
ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose py...   199   1e-49

>ref|XP_002523303.1| ATP binding protein, putative [Ricinus communis]
            gi|223537391|gb|EEF39019.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 873

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/144 (71%), Positives = 122/144 (84%)
 Frame = -3

Query: 478  LMLELEQRLLVVFTGQVRLANRVLQKVVLRYLQHDNLLISSIKRLAELAKIGREALMNGD 299
            L++EL+QRLLVVFTGQVRLA++VLQKVV+RYLQ DNLL+SS+KRLAELAKIGREALMN +
Sbjct: 726  LIIELKQRLLVVFTGQVRLAHQVLQKVVIRYLQRDNLLVSSVKRLAELAKIGREALMNCE 785

Query: 298  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFELAHPFCSGYKLVXXXXXXXXXXXAKNAD 119
            +DE+GEIMLEAWRLHQELDPYCSNE VDRLF  A P+C GYKLV           AKNA+
Sbjct: 786  IDEIGEIMLEAWRLHQELDPYCSNELVDRLFAFADPYCCGYKLVGAGGGGFALLLAKNAN 845

Query: 118  FARELRHLLEKSSEFSVEVYNWNI 47
              +ELRH LE+ S+F+V+VYNW+I
Sbjct: 846  SGKELRHKLEECSDFNVKVYNWSI 869


>ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
            [Glycine max]
          Length = 1049

 Score =  203 bits (517), Expect = 1e-50
 Identities = 103/145 (71%), Positives = 117/145 (80%)
 Frame = -3

Query: 478  LMLELEQRLLVVFTGQVRLANRVLQKVVLRYLQHDNLLISSIKRLAELAKIGREALMNGD 299
            L+ EL+QRLLVVFTGQVRLA++VLQKVV+RYL+ DNLL+SSIKRLAELAKIGREALMN D
Sbjct: 904  LISELQQRLLVVFTGQVRLAHKVLQKVVVRYLRRDNLLVSSIKRLAELAKIGREALMNCD 963

Query: 298  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFELAHPFCSGYKLVXXXXXXXXXXXAKNAD 119
            VDELGEI+LEAWRLHQELDPYCSNEF+DRLF  A P+C GYKLV           AK+A 
Sbjct: 964  VDELGEIILEAWRLHQELDPYCSNEFIDRLFSFATPYCCGYKLVGAGGGGFALLLAKDAQ 1023

Query: 118  FARELRHLLEKSSEFSVEVYNWNIF 44
             A+ELR  LE    F V+VY+W IF
Sbjct: 1024 LAKELRRRLEDEKHFEVKVYDWQIF 1048


>ref|XP_003520879.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
            [Glycine max]
          Length = 1056

 Score =  202 bits (514), Expect = 2e-50
 Identities = 103/145 (71%), Positives = 116/145 (80%)
 Frame = -3

Query: 478  LMLELEQRLLVVFTGQVRLANRVLQKVVLRYLQHDNLLISSIKRLAELAKIGREALMNGD 299
            L+ +L+QRLLVVFTGQVRLA++VLQKVV+RYL+ DNLL+SSIKRL ELAKIGREALMN D
Sbjct: 911  LISKLQQRLLVVFTGQVRLAHKVLQKVVVRYLRRDNLLVSSIKRLVELAKIGREALMNCD 970

Query: 298  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFELAHPFCSGYKLVXXXXXXXXXXXAKNAD 119
            VDELGEIMLEAWRLHQELDPYCSNEFVDRLF  A P+C GYKLV           AK+A 
Sbjct: 971  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFSFATPYCCGYKLVGAGGGGFALLLAKDAQ 1030

Query: 118  FARELRHLLEKSSEFSVEVYNWNIF 44
             A+ELR  LE    F V+VY+W IF
Sbjct: 1031 LAKELRQRLEDDKHFEVKVYDWQIF 1055


>emb|CBI40584.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  199 bits (507), Expect = 1e-49
 Identities = 105/152 (69%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -3

Query: 478  LMLELEQRLLVVFTGQVRLANRVLQKVVLRYLQHDNLLISSIKRLAELAKIGREALMNGD 299
            L+ +L+QRLLVVFTGQVR A RVL+KVV RYL+ DNLLISSIKRLAELA++GREALMN D
Sbjct: 932  LISDLQQRLLVVFTGQVRPARRVLEKVVTRYLRRDNLLISSIKRLAELARMGREALMNCD 991

Query: 298  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFELAHPFCSGYKLVXXXXXXXXXXXAKNAD 119
            +DELGEIMLEAWRLHQELDPYCSN FVDRLFELA PFC GYKLV           AK+AD
Sbjct: 992  LDELGEIMLEAWRLHQELDPYCSNTFVDRLFELADPFCCGYKLVGAGGGGFALLLAKDAD 1051

Query: 118  FARELRHLLEK-------SSEFSVEVYNWNIF 44
             A++LR LL+K        SEF V++YNW +F
Sbjct: 1052 SAKKLRDLLQKDPHLEEYGSEFEVKIYNWALF 1083


>ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
            [Vitis vinifera]
          Length = 1079

 Score =  199 bits (507), Expect = 1e-49
 Identities = 105/152 (69%), Positives = 120/152 (78%), Gaps = 7/152 (4%)
 Frame = -3

Query: 478  LMLELEQRLLVVFTGQVRLANRVLQKVVLRYLQHDNLLISSIKRLAELAKIGREALMNGD 299
            L+ +L+QRLLVVFTGQVR A RVL+KVV RYL+ DNLLISSIKRLAELA++GREALMN D
Sbjct: 928  LISDLQQRLLVVFTGQVRPARRVLEKVVTRYLRRDNLLISSIKRLAELARMGREALMNCD 987

Query: 298  VDELGEIMLEAWRLHQELDPYCSNEFVDRLFELAHPFCSGYKLVXXXXXXXXXXXAKNAD 119
            +DELGEIMLEAWRLHQELDPYCSN FVDRLFELA PFC GYKLV           AK+AD
Sbjct: 988  LDELGEIMLEAWRLHQELDPYCSNTFVDRLFELADPFCCGYKLVGAGGGGFALLLAKDAD 1047

Query: 118  FARELRHLLEK-------SSEFSVEVYNWNIF 44
             A++LR LL+K        SEF V++YNW +F
Sbjct: 1048 SAKKLRDLLQKDPHLEEYGSEFEVKIYNWALF 1079


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