BLASTX nr result

ID: Coptis25_contig00010202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010202
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251...   114   3e-23
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm...   102   1e-19
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19
ref|XP_004161149.1| PREDICTED: uncharacterized LOC101214658 [Cuc...    99   2e-18
ref|XP_004147429.1| PREDICTED: uncharacterized protein LOC101214...    99   2e-18

>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
           gi|297740629|emb|CBI30811.3| unnamed protein product
           [Vitis vinifera]
          Length = 665

 Score =  114 bits (285), Expect = 3e-23
 Identities = 51/72 (70%), Positives = 62/72 (86%)
 Frame = +3

Query: 648 ICKVHSIEGELRVKPNTDFPELRFVELGRRWLKEQYSGKEIIREVELVEGRDHPRQKSWI 827
           I  VH ++GE+RVKPNTDFPELRF E G RWL++Q+SGKE IREVELVEGR HP QK+WI
Sbjct: 83  ISSVHGLQGEIRVKPNTDFPELRFAEPGIRWLRQQFSGKETIREVELVEGRGHPGQKTWI 142

Query: 828 VRFSGIDTVEKS 863
           ++F GIDTVE++
Sbjct: 143 LKFGGIDTVEEA 154


>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
           gi|223541168|gb|EEF42724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 631

 Score =  102 bits (254), Expect = 1e-19
 Identities = 45/72 (62%), Positives = 61/72 (84%)
 Frame = +3

Query: 648 ICKVHSIEGELRVKPNTDFPELRFVELGRRWLKEQYSGKEIIREVELVEGRDHPRQKSWI 827
           +  VH ++GE+ VKP+TDFPELRF + GRRWL++Q SGK++I+EVEL+EGR +  QKSWI
Sbjct: 46  LSSVHGLQGEICVKPSTDFPELRFSQPGRRWLRQQISGKDMIQEVELIEGRGYHGQKSWI 105

Query: 828 VRFSGIDTVEKS 863
           +RF GIDTVE++
Sbjct: 106 LRFDGIDTVEQA 117


>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  102 bits (253), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 59/72 (81%)
 Frame = +3

Query: 648 ICKVHSIEGELRVKPNTDFPELRFVELGRRWLKEQYSGKEIIREVELVEGRDHPRQKSWI 827
           I  VH ++GE+ VKP TDFPELRF + GRRWL++  SGK++IREVELVEGR H  +KSWI
Sbjct: 90  ISNVHGLQGEISVKPTTDFPELRFSKPGRRWLRQLVSGKDVIREVELVEGRGHHGRKSWI 149

Query: 828 VRFSGIDTVEKS 863
           ++F GIDTV+++
Sbjct: 150 LKFGGIDTVDRA 161


>ref|XP_004161149.1| PREDICTED: uncharacterized LOC101214658 [Cucumis sativus]
          Length = 1138

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +3

Query: 648 ICKVHSIEGELRVKPNTDFPELRFVELGRRWLKEQYSGKEIIREVELVEGRDHPRQKSWI 827
           I  VH  EGE+RVKP TDFPELRF   G RWLK+Q SG+E IREV+L +GR+HP +KSWI
Sbjct: 195 ISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHPGRKSWI 254

Query: 828 VRFSGIDTVEKS 863
           ++F GIDT +++
Sbjct: 255 LKFIGIDTADQA 266


>ref|XP_004147429.1| PREDICTED: uncharacterized protein LOC101214658 [Cucumis sativus]
          Length = 846

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +3

Query: 648 ICKVHSIEGELRVKPNTDFPELRFVELGRRWLKEQYSGKEIIREVELVEGRDHPRQKSWI 827
           I  VH  EGE+RVKP TDFPELRF   G RWLK+Q SG+E IREV+L +GR+HP +KSWI
Sbjct: 26  ISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHPGRKSWI 85

Query: 828 VRFSGIDTVEKS 863
           ++F GIDT +++
Sbjct: 86  LKFIGIDTADQA 97


Top