BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010192
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   347   2e-93
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   337   4e-90
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   333   4e-89
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   326   7e-87
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   322   8e-86

>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
            gi|223545980|gb|EEF47483.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 500

 Score =  347 bits (891), Expect = 2e-93
 Identities = 175/240 (72%), Positives = 203/240 (84%), Gaps = 10/240 (4%)
 Frame = +2

Query: 401  NQAIGMVSSAQANYMRVVVEKAAPTENT-------SSSIVGVELLCVVRAVLKKIKRRVL 559
            +QA+G V++AQAN+MRV+++   P+  T         S +GVELLCVVRAVLKKI+RRVL
Sbjct: 92   SQAVGTVAAAQANFMRVIIQSLPPSSGTFLKSPEEEDSRIGVELLCVVRAVLKKIRRRVL 151

Query: 560  VGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFL 739
            VGDKV+V SIDWVD+RGMIENVF+RS+EILDPPVANVDHLLVLFS +QPK+E F+LTRFL
Sbjct: 152  VGDKVVVGSIDWVDRRGMIENVFQRSTEILDPPVANVDHLLVLFSMDQPKIEPFALTRFL 211

Query: 740  VEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQ 919
            VEAESTGIP+TLALNKSELVDEET +AWK++LR WGY+PLFCSVES +GLDSLA+ILREQ
Sbjct: 212  VEAESTGIPLTLALNKSELVDEETLIAWKSRLRSWGYEPLFCSVESKLGLDSLAYILREQ 271

Query: 920  TSVIVGPSGVGKSSLINALRGSKHG---PEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGK 1090
            T+VIVGPSGVGKSSLINALR         E DNW   + GSKWFE+QRVGEVS RSGRGK
Sbjct: 272  TTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFDPMLGSKWFEEQRVGEVSTRSGRGK 331


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
            putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus]
          Length = 504

 Score =  337 bits (863), Expect = 4e-90
 Identities = 176/250 (70%), Positives = 204/250 (81%), Gaps = 20/250 (8%)
 Frame = +2

Query: 401  NQAIGMVSSAQANYMRVVV---------------EKAAPTENTSS--SIVGVELLCVVRA 529
            +QAIG V++AQAN+MRV+V               E++   E+ SS  S++GVELLCVV+A
Sbjct: 88   SQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDDLERSGSLEDDSSKSSMLGVELLCVVKA 147

Query: 530  VLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPK 709
            VLKKIKRRVLVGDKV+V SIDWVD+RGMIENVF+RSSEILDPPVANVDHLLVLFS +QP+
Sbjct: 148  VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPR 207

Query: 710  VESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGL 889
            +E F+LTRFLVEAESTGIP+TL LNK ELVDEET V+WK++LR WGY PLFCSV++G GL
Sbjct: 208  LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPLFCSVQTGAGL 267

Query: 890  DSLAFILREQTSVIVGPSGVGKSSLINALRGSKH---GPEEDNWLSHIEGSKWFEDQRVG 1060
            DSLAFILR+QT+VIVGPSGVGKSSLINALR S       + DNW   I GSKWFE+QRV 
Sbjct: 268  DSLAFILRDQTTVIVGPSGVGKSSLINALRNSNRATDASDTDNWFDPILGSKWFEEQRVA 327

Query: 1061 EVSIRSGRGK 1090
            EVS RSGRGK
Sbjct: 328  EVSTRSGRGK 337


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
            [Vitis vinifera]
          Length = 491

 Score =  333 bits (854), Expect = 4e-89
 Identities = 190/321 (59%), Positives = 219/321 (68%), Gaps = 17/321 (5%)
 Frame = +2

Query: 179  MSISLTSIFRYRLSLSLPILHLKKTSS---TIITSARQDPNPYRKLQXXXXXXXXXXXXX 349
            M I+ TSIFRY    SL +L     +S       +  Q+P   +                
Sbjct: 1    MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL 60

Query: 350  XXXXXXXXXXXXXXXXXNQAIGMVSSAQANYMRVVVEKAAPTENTSSSI---------VG 502
                              +A+GMV++AQAN+MRV+VE +   +               VG
Sbjct: 61   SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG 120

Query: 503  VELLCVVRAVLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLL 682
            VELLCVVRAVLKKIKRRVLVGDKVLV SIDWVD+RG+IENVF R SEILDPPVANVDHLL
Sbjct: 121  VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL 180

Query: 683  VLFSFEQPKVESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLF 862
            VLF+ EQPK+E +SLTRFLVEAESTGIP+TLALNKSELVDEET+VAWK++LR WGY P+F
Sbjct: 181  VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF 240

Query: 863  CSVESGVGLDSLAFILREQTSVIVGPSGVGKSSLINALRGSKH-----GPEEDNWLSHIE 1027
            CSVES  GLD+LAF LREQT+VIVGPSGVGKSSLINALR S H       EE+NW   I 
Sbjct: 241  CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR-SNHPLINVSSEENNWFDSIL 299

Query: 1028 GSKWFEDQRVGEVSIRSGRGK 1090
            GSK  E+QRVGEVS+RSGRGK
Sbjct: 300  GSKLLEEQRVGEVSVRSGRGK 320


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 473

 Score =  326 bits (835), Expect = 7e-87
 Identities = 167/231 (72%), Positives = 194/231 (83%), Gaps = 1/231 (0%)
 Frame = +2

Query: 401  NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 580
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 79   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 135

Query: 581  SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 760
             SIDWVD+RGMIENVF R+SEILDPPVANVD LLVLFS EQPK E F+LTRFLVEAESTG
Sbjct: 136  GSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLEQPKPEPFTLTRFLVEAESTG 195

Query: 761  IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 940
            IP+TLALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L F LR+QT+VIVGP
Sbjct: 196  IPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGFKLRDQTTVIVGP 255

Query: 941  SGVGKSSLINALRGS-KHGPEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGK 1090
            SGVGKSSLINALR +  +  E +NW   + GSKW EDQRVGEVS RSGRGK
Sbjct: 256  SGVGKSSLINALRSNPSNAAEGENWFEPVLGSKWLEDQRVGEVSTRSGRGK 306


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 475

 Score =  322 bits (826), Expect = 8e-86
 Identities = 166/231 (71%), Positives = 192/231 (83%), Gaps = 1/231 (0%)
 Frame = +2

Query: 401  NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 580
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 83   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 139

Query: 581  SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 760
             SIDWVD+RGMIENVF+R+SEILDPPVANVD LLVLFS E PK E F+LTRFLVEAESTG
Sbjct: 140  GSIDWVDRRGMIENVFQRTSEILDPPVANVDQLLVLFSLEHPKPEPFTLTRFLVEAESTG 199

Query: 761  IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 940
            IP+ LALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L + LR+QT+VIVGP
Sbjct: 200  IPLMLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGYKLRDQTTVIVGP 259

Query: 941  SGVGKSSLINALRGS-KHGPEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGK 1090
            SGVGKSSLINALR +     E DNW   I GSKW EDQRVGEVS RSGRGK
Sbjct: 260  SGVGKSSLINALRSNPSDAAEGDNWFEPILGSKWLEDQRVGEVSTRSGRGK 310