BLASTX nr result

ID: Coptis25_contig00010187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010187
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251...   105   5e-21
emb|CBI23663.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_004168400.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    90   2e-16
ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205...    90   2e-16

>ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251059 [Vitis vinifera]
          Length = 1292

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/93 (54%), Positives = 61/93 (65%)
 Frame = +3

Query: 3   IKFVQLWKEKHETGH*LEIDSAETMSDPPDVSSMIAPGTVISIEAKKQNESGELWHESNA 182
           ++F+ LWK KHETG  LEI++AE MS   D SSM   G  +S    KQ E  E W ES  
Sbjct: 225 LRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNKQKEFREAWPESLN 284

Query: 183 EKRPPLDTQIPPGSQEYFQGQYQHPMYPQWPIH 281
           EK PP+D Q+P G QEYFQGQ+ H M+P WPIH
Sbjct: 285 EK-PPMDHQVPLGHQEYFQGQFPHHMFPPWPIH 316


>emb|CBI23663.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 16/109 (14%)
 Frame = +3

Query: 3   IKFVQLWKEKHETGH*LEIDSAETMSDPPDVSSMIAPGTVISIEAKKQNESGELWHES-- 176
           ++F+ LWK KHETG  LEI++AE MS   D SSM   G  +S    KQ E  E W ES  
Sbjct: 225 LRFLDLWKSKHETGQWLEIEAAEAMSSQSDFSSMNPSGITLSNMVNKQKEFREAWPESLS 284

Query: 177 --------------NAEKRPPLDTQIPPGSQEYFQGQYQHPMYPQWPIH 281
                         +A+++PP+D Q+P G QEYFQGQ+ H M+P WPIH
Sbjct: 285 ELASENNGKARIDASADEKPPMDHQVPLGHQEYFQGQFPHHMFPPWPIH 333


>ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|222851499|gb|EEE89046.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
 Frame = +3

Query: 3   IKFVQLWKEKHETGH*LEIDSAETMSDPPDVSSMIAPGTVISIEAKKQ-----NESGELW 167
           ++F++LWK KHETG  +EI+ AE MS   D SSM A G V+S    KQ     +   +  
Sbjct: 244 VRFMELWKRKHETGQWVEIEGAEAMSSRSDFSSMNASGIVLSNTINKQWPETPDSKRKAG 303

Query: 168 HESNAEKRPPLDTQIPPGSQEYFQGQYQHPMYPQWPIH 281
            + +A++RPP D Q  PG QEYFQGQ+ HPM+P WPIH
Sbjct: 304 ADPSADERPPTDQQPSPGQQEYFQGQFPHPMFPPWPIH 341


>ref|XP_004168400.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101205835
           [Cucumis sativus]
          Length = 1257

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
 Frame = +3

Query: 3   IKFVQLWKEKHETGH*LEIDSAETMSDPPDVS-SMIAPGTVISIEAKKQNESGELWHESN 179
           +KF +LWK KHE+G  LEI++AE +S  PD S S+   G +++    KQ ES E W ES 
Sbjct: 225 LKFKELWKRKHESGQWLEIEAAEALSSRPDFSPSVNTSGIILTSLTDKQTESRETWSESP 284

Query: 180 AEK------------RPPLDTQIPPGSQEYFQGQYQHPMYPQWPIH 281
            E               P+  Q PPG QEY QGQY H MYP WPI+
Sbjct: 285 NEPSSTNKGNAITDGNAPMMYQSPPGHQEYLQGQYPHHMYPPWPIN 330


>ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205835 [Cucumis sativus]
          Length = 1303

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
 Frame = +3

Query: 3   IKFVQLWKEKHETGH*LEIDSAETMSDPPDVS-SMIAPGTVISIEAKKQNESGELWHESN 179
           +KF +LWK KHE+G  LEI++AE +S  PD S S+   G +++    KQ ES E W ES 
Sbjct: 235 LKFKELWKRKHESGQWLEIEAAEALSSRPDFSPSVNTSGIILTSLTDKQTESRETWSESP 294

Query: 180 AEK------------RPPLDTQIPPGSQEYFQGQYQHPMYPQWPIH 281
            E               P+  Q PPG QEY QGQY H MYP WPI+
Sbjct: 295 NEPSSTNKGNAITDGNAPMMYQSPPGHQEYLQGQYPHHMYPPWPIN 340


Top