BLASTX nr result

ID: Coptis25_contig00010185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010185
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-21
ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-21
ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|2235456...   107   7e-21
ref|XP_002278180.1| PREDICTED: uncharacterized protein LOC100248...   107   9e-21
emb|CAN80329.1| hypothetical protein VITISV_002989 [Vitis vinifera]   106   1e-20

>ref|XP_002329514.1| predicted protein [Populus trichocarpa] gi|222870223|gb|EEF07354.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  109 bits (272), Expect = 2e-21
 Identities = 107/296 (36%), Positives = 115/296 (38%), Gaps = 31/296 (10%)
 Frame = -1

Query: 1268 QQPPQPHVYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXSMRLQRIRPPPL 1089
            +Q PQP VYNISKNDFRNIVQQLTG                       SMRLQ+IRPPPL
Sbjct: 37   RQQPQPQVYNISKNDFRNIVQQLTG-----SPSQEPLPRPPQNPPKPQSMRLQKIRPPPL 91

Query: 1088 SPIARPQ-XXXXXXXXXXXXXXXXNGFVRXXXXXXXXXXXXPH---------GDAGWNTT 939
            +PI RP                  N FVR            P          GD+GW +T
Sbjct: 92   TPINRPHIPPPVPAPAVAPPVPYHNAFVRPGMPHPPGQFGLPSPTMTPPFIPGDSGWAST 151

Query: 938  AESPISAYMRYLQNSMNGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 759
            AESPISAYMRYLQN+M   P PR                                     
Sbjct: 152  AESPISAYMRYLQNTMI-DPGPRGNQAQSPLQPHPPLPQGRGQIQPQHQPPSGGLLLNPP 210

Query: 758  PR-----GGNGP---------------PLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXX 639
                   G NGP               P LPSPTSQFLLPSP+ YMN             
Sbjct: 211  LAPVPTPGVNGPAPPMPNLPSPWMNGPPCLPSPTSQFLLPSPTGYMN-LLSPRSPYPLLS 269

Query: 638  XXXXXXXLTPGF-FSPFSHQSGILXXXXXXXXXXXXXXXXXXXXXXPVLSPRWRDQ 474
                   LTP F FSP + QSGIL                      PV SPRWRDQ
Sbjct: 270  PGVQFPPLTPNFAFSPMA-QSGIL-GPGPQPPPSPGFFPLSPSGFFPVSSPRWRDQ 323


>ref|XP_002326722.1| predicted protein [Populus trichocarpa] gi|222834044|gb|EEE72521.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  108 bits (269), Expect = 4e-21
 Identities = 97/264 (36%), Positives = 106/264 (40%), Gaps = 31/264 (11%)
 Frame = -1

Query: 1268 QQPPQPHVYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXSMRLQRIRPPPL 1089
            +Q PQP VYNISKNDFRNIVQQLTG                       SMRLQ+IRPPPL
Sbjct: 37   RQQPQPQVYNISKNDFRNIVQQLTG-----SPSQEPLPRPPNNPPKPQSMRLQKIRPPPL 91

Query: 1088 SPIARPQ--XXXXXXXXXXXXXXXXNGFVRXXXXXXXXXXXXPH---------GDAGWNT 942
            +PI RP                   N FVR            P          GD+GW  
Sbjct: 92   TPINRPHVPPPFPAPAVAPPPVPYHNAFVRPGMLPPPSQFGLPSPTMMPPLTPGDSGWAN 151

Query: 941  TAESPISAYMRYLQNSM-------NGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 783
            TAESPISAYMRYLQNS+       N    PR                             
Sbjct: 152  TAESPISAYMRYLQNSIIDPGSWGNQTQPPRQPYPPLPQGPGQIQPQHQPPSGGLLPNPH 211

Query: 782  XXXXXXXXPRGG------------NGPPLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXX 639
                      G             NGPPLLPSPTSQFLLPSP+ YM+             
Sbjct: 212  LPQVPTPGANGPVPYMPNLPSPRMNGPPLLPSPTSQFLLPSPTGYMS-LLSPRSPYPLLP 270

Query: 638  XXXXXXXLTPGF-FSPFSHQSGIL 570
                   LTP F FSP + QSG+L
Sbjct: 271  PGIQFRPLTPNFAFSPMA-QSGVL 293


>ref|XP_002515194.1| LRX2, putative [Ricinus communis] gi|223545674|gb|EEF47178.1| LRX2,
            putative [Ricinus communis]
          Length = 321

 Score =  107 bits (267), Expect = 7e-21
 Identities = 102/288 (35%), Positives = 110/288 (38%), Gaps = 23/288 (7%)
 Frame = -1

Query: 1268 QQPPQPHVYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXSMRLQRIRPPPL 1089
            +Q PQP VYNISKNDFRNIVQQLTG                       SMRLQ+IRPPPL
Sbjct: 41   RQQPQPQVYNISKNDFRNIVQQLTG-----SPSQEPLPRPPQNPPKPQSMRLQKIRPPPL 95

Query: 1088 SPIARPQ---XXXXXXXXXXXXXXXXNGFVR---XXXXXXXXXXXXPHGDAGWNTTAESP 927
            +PI RP                    N F R                 GD+ W  TAESP
Sbjct: 96   TPINRPHIPPPVPAPAVAPPPPVPFNNNFARPGQFGHPSPTMMPPMAPGDSAWANTAESP 155

Query: 926  ISAYMRYLQNSMNGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGG 747
            ISAYMRYLQNS+   PSPR                                     P   
Sbjct: 156  ISAYMRYLQNSIM-DPSPRGNQAQPSLQQLQAQGPAYIHPQPPSSGLLPNPHMPALPSPR 214

Query: 746  -NGP---------------PLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXL 615
             NGP                LLPSPTSQFLLPSP+ YMN                    L
Sbjct: 215  LNGPVPHVTNLPSPQMNGPALLPSPTSQFLLPSPTGYMNLLSPRSPYPFYSPGVQFPPPL 274

Query: 614  TPGF-FSPFSHQSGILXXXXXXXXXXXXXXXXXXXXXXPVLSPRWRDQ 474
               F FSP + QSGIL                      P+ SPRWRDQ
Sbjct: 275  AHNFTFSPMA-QSGILGPGPQPPPSPGLVFPLSPTGFFPLSSPRWRDQ 321


>ref|XP_002278180.1| PREDICTED: uncharacterized protein LOC100248947 [Vitis vinifera]
          Length = 307

 Score =  107 bits (266), Expect = 9e-21
 Identities = 97/280 (34%), Positives = 106/280 (37%), Gaps = 16/280 (5%)
 Frame = -1

Query: 1268 QQPPQPHVYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXSMRLQRIRPPPL 1089
            +Q PQP VYNISKNDFRNIVQQLTG                       SMRLQRIRPPPL
Sbjct: 35   RQQPQPQVYNISKNDFRNIVQQLTG-----SPSQEPLPRPPQNPPKHPSMRLQRIRPPPL 89

Query: 1088 SPIARPQ--------XXXXXXXXXXXXXXXXNGFVRXXXXXXXXXXXXPH----GDAGWN 945
            SPI RP                         +G VR                  GD  W 
Sbjct: 90   SPINRPHIPPPALVPAPAPALAPAPGQVPYNHGLVRPPPQFAQPHPMPVQPLMPGDTSWT 149

Query: 944  TTAESPISAYMRYLQNS-MNGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
              AESPISAYMRYLQNS ++ GP P                                   
Sbjct: 150  HVAESPISAYMRYLQNSIIDSGPRPPLGQGPPRLQSPVLGSVQAQPPVSGLIPNPHVPPF 209

Query: 767  XXXPRGGNGPPLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXLTPGF-FSPF 591
                   NGP LLPSPTSQ+  PSPS ++N                    LTP F FSP 
Sbjct: 210  PSPRM--NGPALLPSPTSQYPFPSPSGFLNLLSPRSPYPLLSPGYQFPPPLTPNFSFSPM 267

Query: 590  SHQSGILXXXXXXXXXXXXXXXXXXXXXXPVL--SPRWRD 477
            +  SGIL                      P+   SPRWRD
Sbjct: 268  A-GSGILGPGPQPPPSPGIVFPLSPSGFFPLTSPSPRWRD 306


>emb|CAN80329.1| hypothetical protein VITISV_002989 [Vitis vinifera]
          Length = 307

 Score =  106 bits (264), Expect = 1e-20
 Identities = 98/280 (35%), Positives = 107/280 (38%), Gaps = 16/280 (5%)
 Frame = -1

Query: 1268 QQPPQPHVYNISKNDFRNIVQQLTGXXXXXXXXXXXXXXXXXXXXXXXSMRLQRIRPPPL 1089
            +Q PQP VYNISKNDFRNIVQQLTG                       SMRLQRIRPPPL
Sbjct: 35   RQQPQPQVYNISKNDFRNIVQQLTG-----SPSQEPLPRPPQNPPKHPSMRLQRIRPPPL 89

Query: 1088 SPIARPQ--------XXXXXXXXXXXXXXXXNGFVRXXXXXXXXXXXXPH----GDAGWN 945
            SPI RP                         +G VR                  GD  W 
Sbjct: 90   SPINRPHIPPPALVPAPAPALAPAPGQVPYNHGLVRPPPQFXQPHPMPVQPLMPGDTSWT 149

Query: 944  TTAESPISAYMRYLQNS-MNGGPSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
              AESPISAYMRYLQNS ++ GP P                                   
Sbjct: 150  HVAESPISAYMRYLQNSIIDSGPRPPLGQGPPRLQSPVLGTVQAQPPVSGLIPNPHVPPF 209

Query: 767  XXXPRGGNGPPLLPSPTSQFLLPSPSAYMNXXXXXXXXXXXXXXXXXXXXLTPGF-FSPF 591
                   NGP LLPSPTSQ+  PSPS ++N                    LTP F FSP 
Sbjct: 210  PSPR--VNGPALLPSPTSQYPFPSPSGFLNLLSPRSPYPLLSPGYQFPPPLTPNFSFSPM 267

Query: 590  SHQSGILXXXXXXXXXXXXXXXXXXXXXXPVLS--PRWRD 477
            +  SGIL                      P+ S  PRWRD
Sbjct: 268  A-GSGILGPGPQPPPSPGIVFPLSPSGFFPLTSPXPRWRD 306


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