BLASTX nr result

ID: Coptis25_contig00010183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010183
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76226.1| hypothetical protein VITISV_000266 [Vitis vinifera]   108   2e-26
ref|XP_002285386.2| PREDICTED: probable receptor-like protein ki...   108   2e-26
ref|XP_002281539.1| PREDICTED: probable receptor-like protein ki...   108   3e-26
emb|CBI36272.3| unnamed protein product [Vitis vinifera]              108   3e-26
dbj|BAK01376.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   1e-23

>emb|CAN76226.1| hypothetical protein VITISV_000266 [Vitis vinifera]
          Length = 342

 Score =  108 bits (271), Expect(2) = 2e-26
 Identities = 59/105 (56%), Positives = 65/105 (61%)
 Frame = -1

Query: 335 IITKLMQNGYLETQLHGPSHESTLTWEIHMKIALDAARCVYQSEYSESVPFLYYFVNQIA 156
           ++ +LMQNG LET+LHGPSH S+LTW I MKIALDAAR                      
Sbjct: 113 LVYELMQNGSLETELHGPSHGSSLTWHIRMKIALDAAR---------------------- 150

Query: 155 FNIYEFC*RMLTRGLEYLHENCNPPVIHRDLKSSNILLDSNFNAK 21
                        GLEYLHE+CNPPVIHRDLKSSNILLDSNFNAK
Sbjct: 151 -------------GLEYLHEHCNPPVIHRDLKSSNILLDSNFNAK 182



 Score = 35.4 bits (80), Expect(2) = 2e-26
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -3

Query: 399 ENEVDLFSKIRHPNILS-LGLSYH 331
           ENEVDL +KI+HPNI+S LG S H
Sbjct: 84  ENEVDLLTKIQHPNIISLLGYSXH 107


>ref|XP_002285386.2| PREDICTED: probable receptor-like protein kinase At1g80640-like
           [Vitis vinifera] gi|296082091|emb|CBI21096.3| unnamed
           protein product [Vitis vinifera]
          Length = 455

 Score =  108 bits (271), Expect(2) = 2e-26
 Identities = 59/105 (56%), Positives = 65/105 (61%)
 Frame = -1

Query: 335 IITKLMQNGYLETQLHGPSHESTLTWEIHMKIALDAARCVYQSEYSESVPFLYYFVNQIA 156
           ++ +LMQNG LET+LHGPSH S+LTW I MKIALDAAR                      
Sbjct: 226 LVYELMQNGSLETELHGPSHGSSLTWHIRMKIALDAAR---------------------- 263

Query: 155 FNIYEFC*RMLTRGLEYLHENCNPPVIHRDLKSSNILLDSNFNAK 21
                        GLEYLHE+CNPPVIHRDLKSSNILLDSNFNAK
Sbjct: 264 -------------GLEYLHEHCNPPVIHRDLKSSNILLDSNFNAK 295



 Score = 35.0 bits (79), Expect(2) = 2e-26
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -3

Query: 399 ENEVDLFSKIRHPNILS-LGLSYH 331
           ENEVDL +KI+HPNI+S LG S H
Sbjct: 197 ENEVDLLTKIQHPNIISLLGYSSH 220


>ref|XP_002281539.1| PREDICTED: probable receptor-like protein kinase At1g80640-like
           [Vitis vinifera]
          Length = 357

 Score =  108 bits (270), Expect(2) = 3e-26
 Identities = 59/105 (56%), Positives = 64/105 (60%)
 Frame = -1

Query: 335 IITKLMQNGYLETQLHGPSHESTLTWEIHMKIALDAARCVYQSEYSESVPFLYYFVNQIA 156
           ++ +LMQNG LETQLHGPSH S+LTW I MKI LDAAR                      
Sbjct: 129 LVYELMQNGSLETQLHGPSHGSSLTWHIRMKITLDAAR---------------------- 166

Query: 155 FNIYEFC*RMLTRGLEYLHENCNPPVIHRDLKSSNILLDSNFNAK 21
                        GLEYLHE+CNPPVIHRDLKSSNILLDSNFNAK
Sbjct: 167 -------------GLEYLHEHCNPPVIHRDLKSSNILLDSNFNAK 198



 Score = 35.0 bits (79), Expect(2) = 3e-26
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -3

Query: 399 ENEVDLFSKIRHPNILS-LGLSYH 331
           ENEVDL +KI+HPNI+S LG S H
Sbjct: 100 ENEVDLLTKIQHPNIISLLGYSRH 123


>emb|CBI36272.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  108 bits (270), Expect(2) = 3e-26
 Identities = 59/105 (56%), Positives = 64/105 (60%)
 Frame = -1

Query: 335 IITKLMQNGYLETQLHGPSHESTLTWEIHMKIALDAARCVYQSEYSESVPFLYYFVNQIA 156
           ++ +LMQNG LETQLHGPSH S+LTW I MKI LDAAR                      
Sbjct: 96  LVYELMQNGSLETQLHGPSHGSSLTWHIRMKITLDAAR---------------------- 133

Query: 155 FNIYEFC*RMLTRGLEYLHENCNPPVIHRDLKSSNILLDSNFNAK 21
                        GLEYLHE+CNPPVIHRDLKSSNILLDSNFNAK
Sbjct: 134 -------------GLEYLHEHCNPPVIHRDLKSSNILLDSNFNAK 165



 Score = 35.0 bits (79), Expect(2) = 3e-26
 Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
 Frame = -3

Query: 399 ENEVDLFSKIRHPNILS-LGLSYH 331
           ENEVDL +KI+HPNI+S LG S H
Sbjct: 67  ENEVDLLTKIQHPNIISLLGYSRH 90


>dbj|BAK01376.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score =  102 bits (254), Expect(2) = 1e-23
 Identities = 54/107 (50%), Positives = 64/107 (59%)
 Frame = -1

Query: 341 YHIITKLMQNGYLETQLHGPSHESTLTWEIHMKIALDAARCVYQSEYSESVPFLYYFVNQ 162
           ++I+ +LM+ G LETQLHGPSH S ++W + MKIALD AR                    
Sbjct: 232 HYIVYELMEKGSLETQLHGPSHGSAMSWHVRMKIALDTAR-------------------- 271

Query: 161 IAFNIYEFC*RMLTRGLEYLHENCNPPVIHRDLKSSNILLDSNFNAK 21
                          GLEYLHE+CNPPVIHRDLKSSNILLDS+FNAK
Sbjct: 272 ---------------GLEYLHEHCNPPVIHRDLKSSNILLDSDFNAK 303



 Score = 32.3 bits (72), Expect(2) = 1e-23
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -3

Query: 399 ENEVDLFSKIRHPNILSL 346
           ENE+DL  +IRHPNI+SL
Sbjct: 205 ENELDLLGRIRHPNIVSL 222


Top