BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010141
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...   109   2e-22
ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat...   106   2e-21
ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   3e-21
ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...   105   5e-21
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/113 (46%), Positives = 76/113 (67%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N LIN +  + R+ F FSVLG+ILK G+QPS  TF +L++G+ ++GK   AL+LF+KM  
Sbjct: 93  NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
             +  D +TYG +IN  CK  N+ TA++ + SME+   +P V +YS IID LC
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC 205



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/112 (31%), Positives = 63/112 (56%)
 Frame = -3

Query: 336 TLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVAN 157
           TLIN Y  +  +D    +   + ++G  P  +T+N+L+ G+   G+   A+ LF++MV  
Sbjct: 339 TLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY 398

Query: 156 RYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
               D VTY ++ ++ CK+     A+ L+  +E   L P +HIYS+++D +C
Sbjct: 399 GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 450


>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/113 (45%), Positives = 75/113 (66%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N LINC+  MG++ FGFSVL  ILKRG+QP  ITF +L+KG+ L G+   AL   +K++A
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                D+V+YG +IN  CK  ++  A++L+  ++    KP+V +Y+ IID LC
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/113 (33%), Positives = 59/113 (52%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N L++     G+V    +VL  +LK   +P  IT+++L+ G FL  +   A  +FN M  
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                D  +Y ++IN FCK+   D AL L   M ++ + P +  YS +ID LC
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/111 (24%), Positives = 60/111 (54%)
 Frame = -3

Query: 333 LINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVANR 154
           LIN +     VD   ++   + ++   P  +T++SL+ G+   G+ +   +L ++M    
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 153 YPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
            P + +TY  +I+  CK+ + D A+ L + M+ + ++P    +++++D LC
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455


>ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/113 (44%), Positives = 76/113 (67%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N L+NC+  MG+++FGFSVL  ILKRG+QP  ITF +L+KG+ L G+   AL   +K++A
Sbjct: 109 NILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 168

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                D+V+YG +IN  CK  ++  A++L+  ++    KP+V +Y+ IID LC
Sbjct: 169 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 221


>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/113 (43%), Positives = 75/113 (66%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N LINC+  MG++ FGFSVL  ILKRG+ P  +T N+L+KG+ L G+   AL   +K++A
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
             +  ++V+YG +IN  CK  ++  A++L+  ++    KP+V +YS IID LC
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/113 (40%), Positives = 72/113 (63%)
 Frame = -3

Query: 339  NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
            N LINC+  MG++ F FS+L  ILKRG+ P  ITF +L+ G+ L G+   AL   +K++A
Sbjct: 965  NILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLA 1024

Query: 159  NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
              +  ++V+YG +IN  CK  ++  A++L+  ++    KP V +Y+ IID LC
Sbjct: 1025 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/113 (35%), Positives = 59/113 (52%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N L++     G+V    SVL  +LK   +P  IT+++L+ G FL  +   A  +FN M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                D  TY ++IN FCK+   D AL L   M ++ + P +  YS +ID LC
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLC 385



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/111 (24%), Positives = 60/111 (54%)
 Frame = -3

Query: 333 LINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVANR 154
           LIN +     VD   ++   + ++   P  +T++SL+ G+   G+     +L ++M    
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 153 YPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
            P + +TY  +I+  CK+ + D A+ L + M+ + ++P+   +++++D LC
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/111 (45%), Positives = 76/111 (68%)
 Frame = -3

Query: 333 LINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVANR 154
           LINCY  +G + F FSVLG +LKRG+Q +AIT  +++KG+ ++G+   ALE  + +VA  
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 153 YPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
           +  DEVTYG +IN  CK   +  A +L+  ME + ++P+V IY+MI+D LC
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLC 229



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/113 (30%), Positives = 57/113 (50%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N LI+     G +     +   +++RG +P  +TFN+L+ G  L      A +LF+    
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                D  +Y ++I  +CK+   D AL L + M  +KL P++  YS +ID LC
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLC 404



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/113 (30%), Positives = 55/113 (48%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           ++LI+     GR+ + + +   I   G  P+ IT+N +L  +        A+ELFN M  
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE 456

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                +  +Y ++IN +CKS   D A+ L   M +  L P    Y+ +ID LC
Sbjct: 457 RGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/113 (27%), Positives = 60/113 (53%)
 Frame = -3

Query: 339 NTLINCYSCMGRVDFGFSVLGNILKRGFQPSAITFNSLLKGMFLDGKPTPALELFNKMVA 160
           N LI  Y    R+D   S+   +  +   P+ +T++SL+ G+   G+ + A ELF+ +  
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421

Query: 159 NRYPCDEVTYGVVINWFCKSLNSDTALQLMSSMEKEKLKPHVHIYSMIIDCLC 1
                + +TY ++++  CK    D A++L + M +  L P+V  Y+++I+  C
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYC 474