BLASTX nr result

ID: Coptis25_contig00010130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010130
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-...   405   e-110
ref|XP_002532683.1| NAC domain-containing protein, putative [Ric...   404   e-110
ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trich...   402   e-110
emb|CBI20351.3| unnamed protein product [Vitis vinifera]              400   e-109
ref|XP_002329110.1| NAC domain protein, IPR003441 [Populus trich...   399   e-109

>ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]
          Length = 353

 Score =  405 bits (1041), Expect = e-110
 Identities = 207/337 (61%), Positives = 242/337 (71%), Gaps = 4/337 (1%)
 Frame = -3

Query: 1039 FRFHPTDEELVVHYLKKKASSAPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRD 860
            FRFHPTDEELVVHYLKKKASSAPLPV IIAEVDLYKFDPWELP KA+FGEQEWYFFSPRD
Sbjct: 19   FRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRD 78

Query: 859  RKYPNGARPNRAATSGYWKATGTDKPILXXXXXXXXXXXKALVFYGGRPPKGIKTSWIMH 680
            RKYPNGARPNRAATSGYWKATGTDKP+L           KALVFYGG+PPKGIKT+WIMH
Sbjct: 79   RKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 138

Query: 679  EYRLADNNNSSSMKPPGLDPANKKGSLRLDEWVLCRIYKKSNSQRPMDHEREDSMDDMLA 500
            EYRLADN  ++  KPPG D  NKK SLRLD+WVLCRIYKK+N+ R +D +++DSMDDML 
Sbjct: 139  EYRLADNKVNT--KPPGCDMGNKKNSLRLDDWVLCRIYKKNNTHRTLDPDKDDSMDDMLG 196

Query: 499  SIPNSTINNQQNLIKSSQVLKTNYGALLENDQNFFNDLLSEDGIXXXXXXXXXXNTRSE- 323
             +P S    QQ+L K       NY ALLEN+Q+ F  +++ DGI           + S+ 
Sbjct: 197  PVPTSISMGQQSL-KLQFPKVPNYSALLENEQSLFEGMINSDGINSSGTISQLACSSSKP 255

Query: 322  --LNMNQVGAVSSFNAKRAIPSPYWNDTTVAFAPASKRFHG-NQQTSIGVNNGDGSNSIS 152
              L++      S    KR +PS YWND   A    +KRF   N   +IG    DG+NSI+
Sbjct: 256  DHLSLVAATTSSILPLKRTLPSLYWNDDDTAGPSTTKRFQAENTDGNIG-RTTDGNNSIA 314

Query: 151  TLLNQLPQSAQFHQHPLLGALGDGVFRSPYQLSGMNW 41
            TLL+QLPQ+   HQ  +LG+LG+GVFR P+QL GMNW
Sbjct: 315  TLLSQLPQTPSLHQQSMLGSLGEGVFRQPFQLPGMNW 351


>ref|XP_002532683.1| NAC domain-containing protein, putative [Ricinus communis]
            gi|223527580|gb|EEF29696.1| NAC domain-containing
            protein, putative [Ricinus communis]
          Length = 346

 Score =  404 bits (1039), Expect = e-110
 Identities = 212/340 (62%), Positives = 244/340 (71%), Gaps = 5/340 (1%)
 Frame = -3

Query: 1039 FRFHPTDEELVVHYLKKKASSAPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRD 860
            FRFHPTDEELVVHYLKKKASSAPLPV IIAEVDLYKFDPWELP KATFGEQEWYFFSPRD
Sbjct: 19   FRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRD 78

Query: 859  RKYPNGARPNRAATSGYWKATGTDKPILXXXXXXXXXXXKALVFYGGRPPKGIKTSWIMH 680
            RKYPNG RPNRAATSGYWKATGTDKP+L           KALVFYGG+PPKGIKT+WIMH
Sbjct: 79   RKYPNGVRPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 138

Query: 679  EYRLADNNNSSSMKPPGLDPANKKGSLRLDEWVLCRIYKKSNSQRPMDHEREDSMDDMLA 500
            EYRLADN  S+  KPPG D ANKK SLRLD+WVLCRIYKK+N+ RPMD E++DSM+DML 
Sbjct: 139  EYRLADNKVSN--KPPGCDLANKKNSLRLDDWVLCRIYKKNNTNRPMDQEKDDSMEDMLG 196

Query: 499  SIPNS-TINNQQNLIKSSQVLK-TNYGALLENDQNFFNDLLSEDGIXXXXXXXXXXNTRS 326
            SIP S TI +QQN     Q+LK TNYG L+END +FFND                 +  +
Sbjct: 197  SIPPSLTIGSQQN--ARLQLLKGTNYGTLVENDTSFFND--------HSISNTNSISQLA 246

Query: 325  ELNMNQVGAVSSFNAKRAIPSPYWNDTT--VAFAPASKRFHGNQQTSIGVNNGDGSNSIS 152
                ++ G +S    KR +PS YW+D     A   +SKR+ G+      V   DG+ S  
Sbjct: 247  SSTCSRPGDLSMLPLKRTLPSLYWSDDVDMAASPSSSKRYQGDHTGDESVVRSDGNGSFV 306

Query: 151  TLLNQLPQSAQFH-QHPLLGALGDGVFRSPYQLSGMNWNS 35
            +LL+QLPQ+   H Q   LG++GDG+FR PYQLSG+NW S
Sbjct: 307  SLLSQLPQTPPLHQQQATLGSIGDGIFRPPYQLSGLNWYS 346


>ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222859984|gb|EEE97531.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 355

 Score =  402 bits (1034), Expect = e-110
 Identities = 206/345 (59%), Positives = 245/345 (71%), Gaps = 10/345 (2%)
 Frame = -3

Query: 1039 FRFHPTDEELVVHYLKKKASSAPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRD 860
            FRFHPTDEELVVHYLKKK +SAPLP+ IIAEVDLYKFDPWELP KATFGEQEWYFFSPRD
Sbjct: 27   FRFHPTDEELVVHYLKKKTTSAPLPMAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRD 86

Query: 859  RKYPNGARPNRAATSGYWKATGTDKPILXXXXXXXXXXXKALVFYGGRPPKGIKTSWIMH 680
            RKYPNG RPNRAATSGYWKATGTDKPIL           KALVFYGG+PPKGIKT+WIMH
Sbjct: 87   RKYPNGTRPNRAATSGYWKATGTDKPILTLGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 146

Query: 679  EYRLADNNNSSSMKPPGLDPANKKGSLRLDEWVLCRIYKKSNSQRPMDHEREDSMDDMLA 500
            EYRLADN   +  KPPG D  NKK SLRLD+WVLCRIYKK+N+ RP+DH+++D MDD+L 
Sbjct: 147  EYRLADNKVKN--KPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRPIDHDKDDYMDDILG 204

Query: 499  SIPNSTI--NNQQNLIKSSQVLKTNYGALLENDQNFFNDLL-SEDGIXXXXXXXXXXNTR 329
            SIP S +  N+Q   +  ++   TNY  LL+ND N F  ++ S DGI            R
Sbjct: 205  SIPPSILVGNHQNGTLHLAK--GTNYETLLDNDHNLFEGIISSNDGI------------R 250

Query: 328  SELNMNQVGAVSS-------FNAKRAIPSPYWNDTTVAFAPASKRFHGNQQTSIGVNNGD 170
            S  +M+ V +  S          KR +PS YW D  +A   +SKRF G+      V   D
Sbjct: 251  SSSSMSHVASSVSKPDHLPMLPLKRTLPSLYWTDEDMAVPSSSKRFQGDINGDESVVGND 310

Query: 169  GSNSISTLLNQLPQSAQFHQHPLLGALGDGVFRSPYQLSGMNWNS 35
            G++SI TLL+QLPQ++Q HQ  +LG++G+G+FR PYQ+ GMNW S
Sbjct: 311  GNSSIVTLLSQLPQTSQLHQQTMLGSMGNGIFRPPYQIPGMNWYS 355


>emb|CBI20351.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  400 bits (1028), Expect = e-109
 Identities = 205/334 (61%), Positives = 236/334 (70%), Gaps = 1/334 (0%)
 Frame = -3

Query: 1039 FRFHPTDEELVVHYLKKKASSAPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRD 860
            FRFHPTDEELVVHYLKKKASSAPLPV IIAEVDLYKFDPWELP KA+FGEQEWYFFSPRD
Sbjct: 19   FRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRD 78

Query: 859  RKYPNGARPNRAATSGYWKATGTDKPILXXXXXXXXXXXKALVFYGGRPPKGIKTSWIMH 680
            RKYPNGARPNRAATSGYWKATGTDKP+L           KALVFYGG+PPKGIKT+WIMH
Sbjct: 79   RKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 138

Query: 679  EYRLADNNNSSSMKPPGLDPANKKGSLRLDEWVLCRIYKKSNSQRPMDHEREDSMDDMLA 500
            EYRLADN  ++  KPPG D  NKK SLRLD+WVLCRIYKK+N+ R +D +++DSMDDML 
Sbjct: 139  EYRLADNKVNT--KPPGCDMGNKKNSLRLDDWVLCRIYKKNNTHRTLDPDKDDSMDDMLG 196

Query: 499  SIPNSTINNQQNLIKSSQVLKTNYGALLENDQNFFNDLLSEDGIXXXXXXXXXXNTRSEL 320
             +P S    QQ+L K       NY ALLEN+Q+ F  +++ DGI                
Sbjct: 197  PVPTSISMGQQSL-KLQFPKVPNYSALLENEQSLFEGMINSDGI---------------- 239

Query: 319  NMNQVGAVSSFNAKRAIPSPYWNDTTVAFAPASKRFHG-NQQTSIGVNNGDGSNSISTLL 143
                    S    KR +PS YWND   A    +KRF   N   +IG    DG+NSI+TLL
Sbjct: 240  ---NTTTSSILPLKRTLPSLYWNDDDTAGPSTTKRFQAENTDGNIG-RTTDGNNSIATLL 295

Query: 142  NQLPQSAQFHQHPLLGALGDGVFRSPYQLSGMNW 41
            +QLPQ+   HQ  +LG+LG+GVFR P+QL GMNW
Sbjct: 296  SQLPQTPSLHQQSMLGSLGEGVFRQPFQLPGMNW 329


>ref|XP_002329110.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222869779|gb|EEF06910.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 360

 Score =  399 bits (1026), Expect = e-109
 Identities = 207/344 (60%), Positives = 243/344 (70%), Gaps = 9/344 (2%)
 Frame = -3

Query: 1039 FRFHPTDEELVVHYLKKKASSAPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRD 860
            FRFHPTDEELVVHYLKKK +SAPLPV IIAEVDLYKFDPWELP KATFGEQEWYFFSPRD
Sbjct: 32   FRFHPTDEELVVHYLKKKTTSAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRD 91

Query: 859  RKYPNGARPNRAATSGYWKATGTDKPILXXXXXXXXXXXKALVFYGGRPPKGIKTSWIMH 680
            RKYPNGARPNRAATSGYWKATGTDKP+L           KALVFYGG+PPKGIKT+WIMH
Sbjct: 92   RKYPNGARPNRAATSGYWKATGTDKPVLSSGGTQKVGVKKALVFYGGKPPKGIKTNWIMH 151

Query: 679  EYRLADNNNSSSMKPPGLDPANKKGSLRLDEWVLCRIYKKSNSQRPMDHEREDSMDDMLA 500
            EYRLADN  ++  KPPG D  NKK SLRLD+WVLCRIYKK+N+QRPMDH+++DSMDD+L 
Sbjct: 152  EYRLADNKVNN--KPPGCDLGNKKNSLRLDDWVLCRIYKKNNTQRPMDHDKDDSMDDVLG 209

Query: 499  SIPNS-TINNQQN----LIKSSQVLKTNYGALLENDQNFFNDLL-SEDGI---XXXXXXX 347
            SIP S ++ + QN    L K      TN+GALL+ND N F  ++ S DGI          
Sbjct: 210  SIPPSISVGSHQNGTLHLAKG-----TNFGALLDNDHNLFEGIISSSDGIRSSSSSLSHM 264

Query: 346  XXXNTRSELNMNQVGAVSSFNAKRAIPSPYWNDTTVAFAPASKRFHGNQQTSIGVNNGDG 167
                T+ +L M           KR +PS YW    +    +SKRF G       V   DG
Sbjct: 265  ASSVTKRDLLM--------LPPKRTLPSLYWTGEDMVGPSSSKRFQGGINGDEIVVRTDG 316

Query: 166  SNSISTLLNQLPQSAQFHQHPLLGALGDGVFRSPYQLSGMNWNS 35
            ++S++TLL +LPQ+ Q HQ  +LG++ DG+FRSPYQ+  MNW S
Sbjct: 317  NSSVATLLGELPQTPQLHQQTMLGSMADGIFRSPYQIPSMNWYS 360


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