BLASTX nr result

ID: Coptis25_contig00010125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010125
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33287.3| unnamed protein product [Vitis vinifera]              338   1e-90
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...   310   2e-82
ref|XP_003528681.1| PREDICTED: abnormal spindle-like microcephal...   305   1e-80
ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   303   4e-80
ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus c...   296   3e-78

>emb|CBI33287.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  338 bits (867), Expect = 1e-90
 Identities = 169/227 (74%), Positives = 202/227 (88%)
 Frame = -1

Query: 907  IIVQSHIRGWIAKREACRERCRIVVIQSYWKGYLARKESREQLLDLRVRLQISSKNVDDG 728
            II+QSHIRGWIA+REA RER R+VVIQSYWKGYLARKESR QL+DLR+R+Q S+ +VDDG
Sbjct: 382  IIIQSHIRGWIARREATRERHRVVVIQSYWKGYLARKESRGQLVDLRLRVQKSATSVDDG 441

Query: 727  MRLINRLVSALSDLLNVRSVSSILHTCSTLDMATRHSQRCCETLVAAGAIDKLLKLIRSV 548
            MR+INRL++ALSDLL+++SVS ILHTC+TLDMAT HSQ CCE LVAAGAI+ LLKLIRSV
Sbjct: 442  MRIINRLLAALSDLLSMKSVSGILHTCATLDMATAHSQICCEKLVAAGAINTLLKLIRSV 501

Query: 547  SRSIPDQEVQKHALSTLRNLSRYPHLADVLIETKGSTETILREMLRNKEEGYFIASDLLK 368
            SRSIPDQEV KHALSTLRNLS YPHLA+VLI+T+GS ETIL E LRNKEEGYF+AS+LLK
Sbjct: 502  SRSIPDQEVLKHALSTLRNLSHYPHLAEVLIDTRGSVETILWEFLRNKEEGYFLASELLK 561

Query: 367  RLCSTKKGVQSVVDLPALLRRLHSLVDDLTRKVNVEKRKIRPHPAKE 227
            ++CS +KGV+++ +LPALL+RLH+L +DL+RK N EKR IR    +E
Sbjct: 562  KICSNQKGVEALRNLPALLKRLHNLTEDLSRKANNEKRNIRGQAGRE 608


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
            [Medicago truncatula] gi|355511469|gb|AES92611.1|
            Abnormal spindle-like microcephaly-associated
            protein-like protein [Medicago truncatula]
          Length = 1503

 Score =  310 bits (795), Expect = 2e-82
 Identities = 154/226 (68%), Positives = 195/226 (86%), Gaps = 1/226 (0%)
 Frame = -1

Query: 907  IIVQSHIRGWIAKREACRERCRIVVIQSYWKGYLARKESREQLLDLRVRLQISSKNVDDG 728
            II+QSHIRGW A+R+A   R  IVVIQS+WKGY+AR++S +QL+DLR RLQ SSKNVDD 
Sbjct: 1252 IIIQSHIRGWAARRKAVVYRHHIVVIQSHWKGYVARQQSTKQLMDLRSRLQESSKNVDDS 1311

Query: 727  MRLINRLVSALSDLLNVRSVSSILHTCSTLDMATRHSQRCCETLVAAGAIDKLLKLIRSV 548
             RLINRL++ALS+LL+++S+S ILHTCSTLD+AT HSQRCCE LVAAGAID LL+LIR +
Sbjct: 1312 KRLINRLLAALSELLSMKSLSDILHTCSTLDLATWHSQRCCEELVAAGAIDTLLRLIRLI 1371

Query: 547  SRSIPDQEVQKHALSTLRNLSRYPHLADVLIETKGSTETILREMLRNKEEGYFIASDLLK 368
            SRSIPDQEV KH LSTLRNL+RYPHL +VLI+ +GS +TI+ E+LRNKEEG+FIAS+LLK
Sbjct: 1372 SRSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRQGSIQTIVLELLRNKEEGFFIASELLK 1431

Query: 367  RLCSTKKGVQSVVDLPALLRRLHSLVDDLTRKVNVEKRKIR-PHPA 233
            ++CST+KGV++++  PA L+RLHSLV++LTRK   +KR +R P P+
Sbjct: 1432 KICSTQKGVETILKSPAFLKRLHSLVEELTRKATYQKRNVRGPTPS 1477


>ref|XP_003528681.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog [Glycine max]
          Length = 1351

 Score =  305 bits (781), Expect = 1e-80
 Identities = 149/221 (67%), Positives = 190/221 (85%)
 Frame = -1

Query: 907  IIVQSHIRGWIAKREACRERCRIVVIQSYWKGYLARKESREQLLDLRVRLQISSKNVDDG 728
            I++QS  RGWIA+R+A  ++ RI+VIQSYWKGYLARKE +EQLLDLR+R+Q S++NVDD 
Sbjct: 1093 IVIQSCTRGWIARRKATVQKHRIIVIQSYWKGYLARKEPKEQLLDLRLRMQKSARNVDDS 1152

Query: 727  MRLINRLVSALSDLLNVRSVSSILHTCSTLDMATRHSQRCCETLVAAGAIDKLLKLIRSV 548
             RLINRL++ALS+LLN++S+S+ILHTCSTLDMAT HSQ+CCE LVAAGAID LL+LI+++
Sbjct: 1153 KRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSQKCCEELVAAGAIDTLLQLIQTI 1212

Query: 547  SRSIPDQEVQKHALSTLRNLSRYPHLADVLIETKGSTETILREMLRNKEEGYFIASDLLK 368
            SRSIPDQEV KHALSTLRNL+RYPHL  VLI+++ S + I+ E+LRNK EGYF+AS+LLK
Sbjct: 1213 SRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRNKNEGYFVASELLK 1272

Query: 367  RLCSTKKGVQSVVDLPALLRRLHSLVDDLTRKVNVEKRKIR 245
            ++CST+ G++ +   PALL+RLH LV+DLTRK   EKR  R
Sbjct: 1273 KICSTRIGIERIFKSPALLKRLHGLVEDLTRKGIYEKRNPR 1313


>ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog [Glycine max]
          Length = 1350

 Score =  303 bits (776), Expect = 4e-80
 Identities = 151/228 (66%), Positives = 195/228 (85%), Gaps = 1/228 (0%)
 Frame = -1

Query: 907  IIVQSHIRGWIAKREACRERCRIVVIQSYWKGYLARKESREQLLDLRVRLQISSKNVDDG 728
            I++QS  RGWIA+R+A  ++ RI+VIQS+WKGYL RKES+EQLLDLR+R+Q S++NVDD 
Sbjct: 1104 IVIQSCARGWIARRKATIQKHRIIVIQSHWKGYLVRKESKEQLLDLRLRMQKSARNVDDS 1163

Query: 727  MRLINRLVSALSDLLNVRSVSSILHTCSTLDMATRHSQRCCETLVAAGAIDKLLKLIRSV 548
             RLINRL++ALS+LLN++S+S+ILHTCSTLDMAT HS++CCE LVAAGAI+ LL+LI++V
Sbjct: 1164 KRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSKKCCEELVAAGAINTLLQLIQTV 1223

Query: 547  SRSIPDQEVQKHALSTLRNLSRYPHLADVLIETKGSTETILREMLRNKEEGYFIASDLLK 368
            SRSIPDQEV KHALSTLRNL+RYPHL  VLI+++ S + I+ E+LRNK EGYF+AS+LLK
Sbjct: 1224 SRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRNKNEGYFVASELLK 1283

Query: 367  RLCSTKKGVQSVVDLPALLRRLHSLVDDLTRKVNVEKRKIR-PHPAKE 227
            ++CST+ G++++   PALL+RLHSLV+DLTRK   EKR  R P   KE
Sbjct: 1284 KICSTRVGLETIFKSPALLKRLHSLVEDLTRKGIYEKRNPRAPRHIKE 1331


>ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus communis]
            gi|223542347|gb|EEF43889.1| hypothetical protein
            RCOM_0905210 [Ricinus communis]
          Length = 1282

 Score =  296 bits (759), Expect = 3e-78
 Identities = 146/227 (64%), Positives = 188/227 (82%)
 Frame = -1

Query: 907  IIVQSHIRGWIAKREACRERCRIVVIQSYWKGYLARKESREQLLDLRVRLQISSKNVDDG 728
            I++QS+ RGW+++++   ER   V+IQS+WKGYL RKESR QLLDLR+R+Q S+KN+DD 
Sbjct: 1037 IVIQSYFRGWVSRQKVYTERRYAVMIQSHWKGYLVRKESRGQLLDLRLRVQKSAKNIDDS 1096

Query: 727  MRLINRLVSALSDLLNVRSVSSILHTCSTLDMATRHSQRCCETLVAAGAIDKLLKLIRSV 548
            MR+INRL  ALS+LL+++S+S ILHTC+TLDM T+HSQ+CCE LVAAGAI  LLKLIR V
Sbjct: 1097 MRIINRLKVALSELLSMKSISGILHTCATLDMTTQHSQKCCEELVAAGAIGILLKLIRLV 1156

Query: 547  SRSIPDQEVQKHALSTLRNLSRYPHLADVLIETKGSTETILREMLRNKEEGYFIASDLLK 368
            SRSIPDQE+ KHALST+RNL+RY HL +VLI++ GS E I  E LRNKE+GYFIAS++LK
Sbjct: 1157 SRSIPDQEILKHALSTIRNLTRYQHLTEVLIDSHGSIEIIFWEFLRNKEDGYFIASEILK 1216

Query: 367  RLCSTKKGVQSVVDLPALLRRLHSLVDDLTRKVNVEKRKIRPHPAKE 227
            ++CS KKG QS+  LPAL++RLHSLV++LTRK  +EKR  +   A+E
Sbjct: 1217 KICSNKKGGQSLRKLPALIKRLHSLVEELTRKSTIEKRNPQGVAARE 1263


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