BLASTX nr result

ID: Coptis25_contig00010118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010118
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875750.1| hypothetical protein ARALYDRAFT_347673 [Arab...    60   3e-07
ref|XP_002883869.1| hypothetical protein ARALYDRAFT_899717 [Arab...    56   5e-06

>ref|XP_002875750.1| hypothetical protein ARALYDRAFT_347673 [Arabidopsis lyrata subsp.
           lyrata] gi|297321588|gb|EFH52009.1| hypothetical protein
           ARALYDRAFT_347673 [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = +3

Query: 174 QKYCFCGDPVYIRSSKTQKNPGKLFYGCKHYDTNSAKACGYFEWVPEQRNNREEVLEAKV 353
           +K C CG P  +  S T KNP + F+GC+ Y       C +F W+ E++  + E L A +
Sbjct: 18  RKLCECGLPAKVFKSNTDKNPNRRFFGCQLYKEGGNAHCKFFRWLNEEKTEKIEELNATI 77

Query: 354 EALKGKSRELKRVNGQLQLELTKVKTE 434
             L+G   +L+R N    LEL+ + TE
Sbjct: 78  LELRG---DLERQN----LELSSINTE 97


>ref|XP_002883869.1| hypothetical protein ARALYDRAFT_899717 [Arabidopsis lyrata subsp.
           lyrata] gi|297329709|gb|EFH60128.1| hypothetical protein
           ARALYDRAFT_899717 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
 Frame = +3

Query: 174 QKYCFCGDPVYIRSSKTQKNPGKLFYGCKHYDTNSAKACGYFEWVPEQ--------RNNR 329
           +K C CG P  +  SKT KNP + F+GC+ Y       C +F W+ E+            
Sbjct: 18  RKLCECGLPAKVFKSKTDKNPNRRFFGCQLYKEGGNAHCKFFRWLDEEVIGWQKRALAEA 77

Query: 330 EEVLEAKVEALKGKSRELKRVNGQLQ---LELTKVKTE 434
           + V++ K E +K  +  +  + G L+   LE++ + TE
Sbjct: 78  QSVIKEKTEKIKELNATILELRGDLERQNLEISSINTE 115


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