BLASTX nr result
ID: Coptis25_contig00010118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010118 (630 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002875750.1| hypothetical protein ARALYDRAFT_347673 [Arab... 60 3e-07 ref|XP_002883869.1| hypothetical protein ARALYDRAFT_899717 [Arab... 56 5e-06 >ref|XP_002875750.1| hypothetical protein ARALYDRAFT_347673 [Arabidopsis lyrata subsp. lyrata] gi|297321588|gb|EFH52009.1| hypothetical protein ARALYDRAFT_347673 [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 60.5 bits (145), Expect = 3e-07 Identities = 31/87 (35%), Positives = 47/87 (54%) Frame = +3 Query: 174 QKYCFCGDPVYIRSSKTQKNPGKLFYGCKHYDTNSAKACGYFEWVPEQRNNREEVLEAKV 353 +K C CG P + S T KNP + F+GC+ Y C +F W+ E++ + E L A + Sbjct: 18 RKLCECGLPAKVFKSNTDKNPNRRFFGCQLYKEGGNAHCKFFRWLNEEKTEKIEELNATI 77 Query: 354 EALKGKSRELKRVNGQLQLELTKVKTE 434 L+G +L+R N LEL+ + TE Sbjct: 78 LELRG---DLERQN----LELSSINTE 97 >ref|XP_002883869.1| hypothetical protein ARALYDRAFT_899717 [Arabidopsis lyrata subsp. lyrata] gi|297329709|gb|EFH60128.1| hypothetical protein ARALYDRAFT_899717 [Arabidopsis lyrata subsp. lyrata] Length = 165 Score = 56.2 bits (134), Expect = 5e-06 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Frame = +3 Query: 174 QKYCFCGDPVYIRSSKTQKNPGKLFYGCKHYDTNSAKACGYFEWVPEQ--------RNNR 329 +K C CG P + SKT KNP + F+GC+ Y C +F W+ E+ Sbjct: 18 RKLCECGLPAKVFKSKTDKNPNRRFFGCQLYKEGGNAHCKFFRWLDEEVIGWQKRALAEA 77 Query: 330 EEVLEAKVEALKGKSRELKRVNGQLQ---LELTKVKTE 434 + V++ K E +K + + + G L+ LE++ + TE Sbjct: 78 QSVIKEKTEKIKELNATILELRGDLERQNLEISSINTE 115