BLASTX nr result

ID: Coptis25_contig00010117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010117
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280522.1| PREDICTED: superoxide dismutase [Fe], chloro...   300   9e-80
gb|AEY78486.2| iron superoxide dismutase, partial [Litchi chinen...   288   4e-76
gb|AFD34189.1| Fe superoxide dismutase [Jatropha curcas]              288   6e-76
ref|XP_002322315.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75
gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus ...   285   3e-75

>ref|XP_002280522.1| PREDICTED: superoxide dismutase [Fe], chloroplastic [Vitis
           vinifera] gi|297744964|emb|CBI38556.3| unnamed protein
           product [Vitis vinifera]
          Length = 306

 Score =  300 bits (769), Expect = 9e-80
 Identities = 139/186 (74%), Positives = 160/186 (86%)
 Frame = +2

Query: 17  KQRKCSQKKTCDSVITAQFELRPPPYPLNSLEPHMSSETLEYHWGKHHRAYVENLNRQVV 196
           K+R CS+K    S+I A+FEL+PPPYPL++LEPHMS ETLEYHWGKHHR YV+NLNRQ+V
Sbjct: 31  KRRTCSRKGN-SSLIIAKFELKPPPYPLSALEPHMSRETLEYHWGKHHRGYVDNLNRQIV 89

Query: 197 GTELDGMTLEDIILLTYNRGDPLPAFNNAAQVWNHEFFWEXXXXXXXXXXXXDLLELIQR 376
           GTELDGMTLEDII +TYN+GD LPAFNNAAQVWNH  FWE            DLLELI+R
Sbjct: 90  GTELDGMTLEDIITITYNKGDLLPAFNNAAQVWNHTSFWESMKPGGGGEPSGDLLELIKR 149

Query: 377 DFGSYEGFIKQFTLAASTQFGSGWAWLAYKANRLDVGNAINPRPSEEDKKLVIVKSPNSV 556
           DFGS+E F+++F LAASTQFGSGWAWLAYKANRLDVGNA+NPRPSEEDKKLV+VKSPN++
Sbjct: 150 DFGSFERFVEEFKLAASTQFGSGWAWLAYKANRLDVGNAVNPRPSEEDKKLVVVKSPNAI 209

Query: 557 NPLVWD 574
           NPL+WD
Sbjct: 210 NPLLWD 215


>gb|AEY78486.2| iron superoxide dismutase, partial [Litchi chinensis]
          Length = 309

 Score =  288 bits (738), Expect = 4e-76
 Identities = 127/188 (67%), Positives = 160/188 (85%)
 Frame = +2

Query: 17  KQRKCSQKKTCDSVITAQFELRPPPYPLNSLEPHMSSETLEYHWGKHHRAYVENLNRQVV 196
           K+ +C+ +K+  + I+A+FEL+PPPYPLN+LEPHMS +TLEYHWGKHHR+YVENLN+Q+ 
Sbjct: 36  KEGRCT-RKSGPTTISAKFELKPPPYPLNALEPHMSQDTLEYHWGKHHRSYVENLNKQIA 94

Query: 197 GTELDGMTLEDIILLTYNRGDPLPAFNNAAQVWNHEFFWEXXXXXXXXXXXXDLLELIQR 376
           GTELDGM+LED++++TYNRGD LP+FNNAAQ WNH+FFWE            +LL++I+R
Sbjct: 95  GTELDGMSLEDVVVVTYNRGDFLPSFNNAAQAWNHDFFWESMKPGGGGKPSGELLQMIER 154

Query: 377 DFGSYEGFIKQFTLAASTQFGSGWAWLAYKANRLDVGNAINPRPSEEDKKLVIVKSPNSV 556
           DFGS+E F+ +F  AASTQFGSGWAWL YKANRLDV NA+NP PS+EDKKL++VKSPN+V
Sbjct: 155 DFGSFERFLSEFKSAASTQFGSGWAWLCYKANRLDVDNAVNPFPSDEDKKLIVVKSPNAV 214

Query: 557 NPLVWDYS 580
           NPLVWDYS
Sbjct: 215 NPLVWDYS 222


>gb|AFD34189.1| Fe superoxide dismutase [Jatropha curcas]
          Length = 305

 Score =  288 bits (736), Expect = 6e-76
 Identities = 125/182 (68%), Positives = 158/182 (86%)
 Frame = +2

Query: 35  QKKTCDSVITAQFELRPPPYPLNSLEPHMSSETLEYHWGKHHRAYVENLNRQVVGTELDG 214
           +++T  +++TA+FEL+PPPYPLN+LEPHMS +TLEYHWGKHHR+YV+NLN+Q+VGTELD 
Sbjct: 38  RRQTGPAIVTAKFELKPPPYPLNALEPHMSKDTLEYHWGKHHRSYVDNLNKQIVGTELDS 97

Query: 215 MTLEDIILLTYNRGDPLPAFNNAAQVWNHEFFWEXXXXXXXXXXXXDLLELIQRDFGSYE 394
           + LED++++TYN+GD LPAFNNAAQ WNHEFFW             +LL+LI+RDFGS++
Sbjct: 98  LPLEDVVIVTYNKGDVLPAFNNAAQAWNHEFFWGCMKPGGGGKRSGELLQLIERDFGSFK 157

Query: 395 GFIKQFTLAASTQFGSGWAWLAYKANRLDVGNAINPRPSEEDKKLVIVKSPNSVNPLVWD 574
            F+++F  AA+TQFGSGWAWLAYKANRL+V NA+NPRPSEEDKKLV+VKSPN+VNPLVWD
Sbjct: 158 KFVEEFRSAAATQFGSGWAWLAYKANRLNVENAVNPRPSEEDKKLVVVKSPNAVNPLVWD 217

Query: 575 YS 580
           YS
Sbjct: 218 YS 219


>ref|XP_002322315.1| predicted protein [Populus trichocarpa] gi|222869311|gb|EEF06442.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  286 bits (731), Expect = 2e-75
 Identities = 123/173 (71%), Positives = 150/173 (86%)
 Frame = +2

Query: 59  ITAQFELRPPPYPLNSLEPHMSSETLEYHWGKHHRAYVENLNRQVVGTELDGMTLEDIIL 238
           +TA+FEL+PPPYP+N+LEPHMS +T EYHWGKHHRAYV NLN+Q+ GTELD M+L+D++L
Sbjct: 1   VTAKFELKPPPYPMNALEPHMSKDTFEYHWGKHHRAYVNNLNKQIEGTELDDMSLDDVVL 60

Query: 239 LTYNRGDPLPAFNNAAQVWNHEFFWEXXXXXXXXXXXXDLLELIQRDFGSYEGFIKQFTL 418
           +TYN+GDPLPAFNNAAQ WNHEFFWE            +LL+L++RDFGS++ F+++F  
Sbjct: 61  ITYNKGDPLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLQLMERDFGSFDKFVEEFKS 120

Query: 419 AASTQFGSGWAWLAYKANRLDVGNAINPRPSEEDKKLVIVKSPNSVNPLVWDY 577
           AA+TQFGSGWAWL YKANRLDVGNA+NP PSEEDKKLV+VKSPN+VNPLVWDY
Sbjct: 121 AAATQFGSGWAWLVYKANRLDVGNAVNPCPSEEDKKLVVVKSPNAVNPLVWDY 173


>gb|AFG22595.1| chloroplast Fe-superoxide dismutase 1B-a [Prunus persica]
           gi|383386087|gb|AFH08807.1| chloroplast Fe-superoxide
           dismutase 1B-b [Prunus persica]
          Length = 319

 Score =  285 bits (730), Expect = 3e-75
 Identities = 130/188 (69%), Positives = 157/188 (83%)
 Frame = +2

Query: 17  KQRKCSQKKTCDSVITAQFELRPPPYPLNSLEPHMSSETLEYHWGKHHRAYVENLNRQVV 196
           KQR+C +K    SV TAQF+L+PPPYPL++LEPHMS ETLEYHWGKHHR YV+NLN+ + 
Sbjct: 47  KQRQCRRKAGGTSV-TAQFKLKPPPYPLDALEPHMSKETLEYHWGKHHRGYVDNLNKLIA 105

Query: 197 GTELDGMTLEDIILLTYNRGDPLPAFNNAAQVWNHEFFWEXXXXXXXXXXXXDLLELIQR 376
           GTELD ++LEDIIL TYN+GD LP FN+AAQ+WNH+FFWE            +LLELI R
Sbjct: 106 GTELDELSLEDIILATYNKGDLLPPFNHAAQIWNHDFFWESMKPGGGGKPSGELLELINR 165

Query: 377 DFGSYEGFIKQFTLAASTQFGSGWAWLAYKANRLDVGNAINPRPSEEDKKLVIVKSPNSV 556
           DFGS+E FI++   AA+TQFGSGWAWLAYKANRLDVGNA+NP+PS+EDK+LV+VKSPN+V
Sbjct: 166 DFGSFERFIEELRSAAATQFGSGWAWLAYKANRLDVGNAVNPKPSDEDKRLVVVKSPNAV 225

Query: 557 NPLVWDYS 580
           NPL+WDYS
Sbjct: 226 NPLIWDYS 233


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