BLASTX nr result

ID: Coptis25_contig00010106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010106
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282450.1| PREDICTED: transcription factor-like protein...   353   e-115
gb|AAQ13675.1|AF181998_1 transcription factor DP1 [Populus tremu...   360   e-115
ref|XP_002326197.1| transcription factor DP, E2 dimerization par...   359   e-114
ref|XP_002322893.1| transcription factor DP, E2 dimerization par...   358   e-113
ref|XP_004137174.1| PREDICTED: transcription factor-like protein...   356   e-113

>ref|XP_002282450.1| PREDICTED: transcription factor-like protein DPB [Vitis vinifera]
            gi|297741646|emb|CBI32778.3| unnamed protein product
            [Vitis vinifera]
          Length = 349

 Score =  353 bits (906), Expect(2) = e-115
 Identities = 183/243 (75%), Positives = 202/243 (83%), Gaps = 2/243 (0%)
 Frame = -3

Query: 1000 EKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIIS 821
            EKVESKGRTTYNEVADELVAEFADP++  +SPD+QQY EKNIRRRVYDALNVLMAMDIIS
Sbjct: 110  EKVESKGRTTYNEVADELVAEFADPSNSLTSPDQQQYDEKNIRRRVYDALNVLMAMDIIS 169

Query: 820  KDKKEIQWKGLPHTSESDIEDLKAECHGLKSRIEKKAAYLQELEEQSVGLQNLIQRNEEL 641
            KDKKEIQWKGLP TS +DIE+LK +  GL+ RIEKKAAYLQELEEQ VGLQNLIQRNE+L
Sbjct: 170  KDKKEIQWKGLPRTSLNDIEELKTDRIGLRGRIEKKAAYLQELEEQFVGLQNLIQRNEQL 229

Query: 640  YGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRL 461
            Y SG+ P+GGV+LPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+ 
Sbjct: 230  YSSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF 289

Query: 460  GKTPEADGDAHAPNSTANGGESSSIQSMSQAHTP--LRSNASGRHPTSPPLPGILKARTK 287
             + P+ D   H        GE SS+  M Q+  P   RS+  GR PTSPPLPGILKAR K
Sbjct: 290  CERPQGDDVTH---DFPADGEGSSMPGMYQSLIPHSSRSSTLGRPPTSPPLPGILKARVK 346

Query: 286  HEH 278
            HEH
Sbjct: 347  HEH 349



 Score = 91.7 bits (226), Expect(2) = e-115
 Identities = 55/99 (55%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = -2

Query: 1340 TATKVG-TRSWGTTVXXXXXXXXXXXXXXXXXXXGEPGTATPAREQAFTRLHHLNIQDDD 1164
            T +K G TRSWGTTV                    E   ATPA E  F RL+HL+I  DD
Sbjct: 17   TVSKGGATRSWGTTVSGQSVSTSGSVGSPSSRS--EAALATPASENTFLRLNHLDIHGDD 74

Query: 1163 VGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKVCEKV 1047
             GS      +KKKRGQRAVGGDKSG GLRQFSMKVCEKV
Sbjct: 75   AGSQGAA-NRKKKRGQRAVGGDKSGRGLRQFSMKVCEKV 112


>gb|AAQ13675.1|AF181998_1 transcription factor DP1 [Populus tremula x Populus tremuloides]
            gi|32187097|gb|AAP73785.1| DP1 [Populus tremula x Populus
            tremuloides]
          Length = 353

 Score =  360 bits (924), Expect(2) = e-115
 Identities = 185/243 (76%), Positives = 206/243 (84%), Gaps = 2/243 (0%)
 Frame = -3

Query: 1000 EKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIIS 821
            EKVESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DIIS
Sbjct: 113  EKVESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIIS 172

Query: 820  KDKKEIQWKGLPHTSESDIEDLKAECHGLKSRIEKKAAYLQELEEQSVGLQNLIQRNEEL 641
            KDKKEIQWKGLP TS SDIE+LK E  GL++R EKKAAYLQELEEQ VGLQNLIQRNE+L
Sbjct: 173  KDKKEIQWKGLPRTSLSDIEELKVERLGLRNRFEKKAAYLQELEEQFVGLQNLIQRNEQL 232

Query: 640  YGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRL 461
            Y SG+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+ 
Sbjct: 233  YSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF 292

Query: 460  GKTPEADGDAHAPNSTANGGESSSIQSMSQAH--TPLRSNASGRHPTSPPLPGILKARTK 287
             + P++DG   APN  A+GGE SS+ SM Q        +N   RHPTSPPLPGI+KAR K
Sbjct: 293  CERPQSDG--MAPNPPADGGEGSSMSSMYQPQILASPSTNTPVRHPTSPPLPGIIKARVK 350

Query: 286  HEH 278
            +EH
Sbjct: 351  NEH 353



 Score = 82.0 bits (201), Expect(2) = e-115
 Identities = 40/64 (62%), Positives = 46/64 (71%)
 Frame = -2

Query: 1238 EPGTATPAREQAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKV 1059
            E   ATPA +  F RL+HL+I  DD  + +    KKKKRGQRAVG DKSG GLRQFS+KV
Sbjct: 52   EHAMATPASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKV 111

Query: 1058 CEKV 1047
            CEKV
Sbjct: 112  CEKV 115


>ref|XP_002326197.1| transcription factor DP, E2 dimerization partner protein [Populus
            trichocarpa] gi|222833390|gb|EEE71867.1| transcription
            factor DP, E2 dimerization partner protein [Populus
            trichocarpa]
          Length = 299

 Score =  359 bits (921), Expect(2) = e-114
 Identities = 185/243 (76%), Positives = 206/243 (84%), Gaps = 2/243 (0%)
 Frame = -3

Query: 1000 EKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIIS 821
            EKVESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DIIS
Sbjct: 59   EKVESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIIS 118

Query: 820  KDKKEIQWKGLPHTSESDIEDLKAECHGLKSRIEKKAAYLQELEEQSVGLQNLIQRNEEL 641
            KDKKEIQWKGLP TS SDIE+LK E  GL++RIEKKAAYLQELEEQ VGLQNLIQRNE+L
Sbjct: 119  KDKKEIQWKGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFVGLQNLIQRNEQL 178

Query: 640  YGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRL 461
            Y SG+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+ 
Sbjct: 179  YSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF 238

Query: 460  GKTPEADGDAHAPNSTANGGESSSIQSMSQAH--TPLRSNASGRHPTSPPLPGILKARTK 287
             + P++D    APN  A+GGE SS+ SM Q        +N   RHPTSPPLPGI+KAR K
Sbjct: 239  CERPQSDD--MAPNPPADGGEGSSMSSMYQPQILASPSTNTPVRHPTSPPLPGIIKARVK 296

Query: 286  HEH 278
            +EH
Sbjct: 297  NEH 299



 Score = 81.3 bits (199), Expect(2) = e-114
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = -2

Query: 1226 ATPAREQAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKVCEKV 1047
            ATPA +  F RL+HL+I  DD  + +    KKKKRGQRAVG DKSG GLRQFS+KVCEKV
Sbjct: 2    ATPASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKVCEKV 61


>ref|XP_002322893.1| transcription factor DP, E2 dimerization partner protein [Populus
            trichocarpa] gi|222867523|gb|EEF04654.1| transcription
            factor DP, E2 dimerization partner protein [Populus
            trichocarpa]
          Length = 355

 Score =  358 bits (919), Expect(2) = e-113
 Identities = 186/243 (76%), Positives = 207/243 (85%), Gaps = 2/243 (0%)
 Frame = -3

Query: 1000 EKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIIS 821
            EKVESKG TTYNEVADELVAEFADP++  S+PD+QQY EKNIRRRVYDALNVLMA+DIIS
Sbjct: 114  EKVESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIIS 173

Query: 820  KDKKEIQWKGLPHTSESDIEDLKAECHGLKSRIEKKAAYLQELEEQSVGLQNLIQRNEEL 641
            KDKKEIQWKGLP TS SDIE+LKAE  GL++RIEKKAAYLQELEEQ +GLQNLIQRNE+L
Sbjct: 174  KDKKEIQWKGLPRTSLSDIEELKAERLGLRNRIEKKAAYLQELEEQFMGLQNLIQRNEQL 233

Query: 640  YGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRL 461
            Y SG+ P+GGVSLPFIL+QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVL AM+ 
Sbjct: 234  YSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF 293

Query: 460  GKTPEADGDAHAPNSTANGGESSSIQSM--SQAHTPLRSNASGRHPTSPPLPGILKARTK 287
             +  ++D  A APN  A+GGE SS+  M   Q  T  R+N   R PTSPPLPGI+KAR K
Sbjct: 294  CERHQSDNMA-APNPAADGGEGSSMSIMYQPQIRTSPRTNNPVRLPTSPPLPGIIKARVK 352

Query: 286  HEH 278
            HEH
Sbjct: 353  HEH 355



 Score = 79.7 bits (195), Expect(2) = e-113
 Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = -2

Query: 1238 EPGTATPAREQAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGG-DKSGNGLRQFSMK 1062
            E   ATPA +  F RL+HL+I  DD  + +    KKKKRGQRA GG DKSG GLRQFSMK
Sbjct: 52   EHAMATPASDNTFLRLNHLDIHADDAATQDAAANKKKKRGQRAAGGADKSGRGLRQFSMK 111

Query: 1061 VCEKV 1047
            VCEKV
Sbjct: 112  VCEKV 116


>ref|XP_004137174.1| PREDICTED: transcription factor-like protein DPB-like [Cucumis
            sativus]
          Length = 347

 Score =  356 bits (914), Expect(2) = e-113
 Identities = 185/244 (75%), Positives = 204/244 (83%), Gaps = 3/244 (1%)
 Frame = -3

Query: 1000 EKVESKGRTTYNEVADELVAEFADPNSRQSSPDRQQYYEKNIRRRVYDALNVLMAMDIIS 821
            EKVESKGRTTYNEVADELVAEFADP +  +SPD+QQY EKNIRRRVYDALNVLMAMDIIS
Sbjct: 106  EKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDIIS 165

Query: 820  KDKKEIQWKGLPHTSESDIEDLKAECHGLKSRIEKKAAYLQELEEQSVGLQNLIQRNEEL 641
            KDKKEIQWKGLP TS +DIE+LKAE  GL++RIEKKAAYLQELEEQ VGLQNLIQRNE+L
Sbjct: 166  KDKKEIQWKGLPRTSVNDIEELKAERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQL 225

Query: 640  YGSGHMPTGGVSLPFILIQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLNAMRL 461
            + S + P+GGVSLPFIL+QTRPHATVE+EISEDMQLVHFDFNSTPFELHDDNYVL AM+ 
Sbjct: 226  FNSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKF 285

Query: 460  GKTPEADGDAHAPNSTANGGESSSIQSMSQ-AHTPL--RSNASGRHPTSPPLPGILKART 290
               P+ D  A   N T +GGE SS+  M Q  H P+   SN   R PTSPPLPGI+KAR 
Sbjct: 286  CNRPQCDNTAQ--NFTPDGGEGSSMSGMYQPPHIPIPSLSNTPVRTPTSPPLPGIIKARV 343

Query: 289  KHEH 278
            KHEH
Sbjct: 344  KHEH 347



 Score = 81.3 bits (199), Expect(2) = e-113
 Identities = 41/64 (64%), Positives = 46/64 (71%)
 Frame = -2

Query: 1238 EPGTATPAREQAFTRLHHLNIQDDDVGSPNVEIAKKKKRGQRAVGGDKSGNGLRQFSMKV 1059
            E   ATPA +  F RL++L+I  D+ GS       KKKRGQRAVGGDKSG GLRQFSMKV
Sbjct: 45   EQTMATPASDNTFLRLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKV 104

Query: 1058 CEKV 1047
            CEKV
Sbjct: 105  CEKV 108


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