BLASTX nr result

ID: Coptis25_contig00010097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010097
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   253   8e-65
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   250   5e-64
ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [...   246   6e-63
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   244   4e-62
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...   243   7e-62

>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  253 bits (645), Expect = 8e-65
 Identities = 130/188 (69%), Positives = 157/188 (83%), Gaps = 4/188 (2%)
 Frame = -1

Query: 1014 GAEVAPIVQLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKFLKHKDSGK 835
            GA+VAPIV+LEEVAVTTGEE E  +LDLKAKLYRFDK+GNQWKERG G+VK LKHK+SGK
Sbjct: 24   GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83

Query: 834  VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 655
            VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 84   VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143

Query: 654  NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTE-KAGEKVPVAADEEK- 487
            NCK+FM+K + + +  +  +EN++ SAAA LLE+ L++ + +TE KA E+ PVAA EEK 
Sbjct: 144  NCKSFMEKVQEVAESQQKKEENKDASAAAGLLEK-LSVEEKETEDKAEEEKPVAAKEEKE 202

Query: 486  PESEDGET 463
             ESE G+T
Sbjct: 203  TESEQGKT 210


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
            unknown [Populus trichocarpa] gi|222845745|gb|EEE83292.1|
            predicted protein [Populus trichocarpa]
          Length = 218

 Score =  250 bits (638), Expect = 5e-64
 Identities = 126/191 (65%), Positives = 157/191 (82%), Gaps = 4/191 (2%)
 Frame = -1

Query: 1014 GAEVAPIVQLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKFLKHKDSGK 835
            GA+VAPIV+LEEVAV+TGEE E  +LDLK+KLYRFDK+GNQWKERG GTVKFLKHK+SGK
Sbjct: 25   GAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESGK 84

Query: 834  VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 655
            VRLVMRQSKTLKICANH ++P MSVQEH G+EKSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 85   VRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 654  NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKT-EKAGEKVPVAADEEKP 484
            NCKTFM+ F+ + +  +  +EN++ +AAA+ L++ L++ + KT EKA E+ P AA EE+ 
Sbjct: 145  NCKTFMEMFQEVAESQKSNEENKDATAAADALDK-LSVEEKKTEEKAVEESPTAAKEEET 203

Query: 483  ES-EDGETRSP 454
            ++ ED +   P
Sbjct: 204  KTCEDKKEEKP 214


>ref|XP_002262903.1| PREDICTED: ran-binding protein 1 homolog c [Vitis vinifera]
            gi|296081117|emb|CBI18249.3| unnamed protein product
            [Vitis vinifera]
          Length = 221

 Score =  246 bits (629), Expect = 6e-63
 Identities = 129/199 (64%), Positives = 154/199 (77%), Gaps = 12/199 (6%)
 Frame = -1

Query: 1014 GAEVAPIVQLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKFLKHKDSGK 835
            GA+VAPIV+LE VAVTTGEE E  +LDLKAKLYRFDKEG QWKERGVGTVKFLKHK SGK
Sbjct: 23   GAQVAPIVKLEVVAVTTGEEEEDAILDLKAKLYRFDKEGKQWKERGVGTVKFLKHKGSGK 82

Query: 834  VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 655
            VRLVMRQSKTLKICANH ++P M+VQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 83   VRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVWHATDFADGELKDELFCIRFASVE 142

Query: 654  NCKTFMQKFEGITDV--VEDENREGSAAAELLERQLNINDGKTEKAGE-------KVPVA 502
            NCKTFM+ F+ + +    ++E+ + SAAA LLE+ L++ D KTE  G+       K  VA
Sbjct: 143  NCKTFMEMFQEVAESQGKKEESEDASAAAGLLEK-LSVGDSKTEDKGQEEGSLATKEKVA 201

Query: 501  ADEEKPESE---DGETRSP 454
             D+E+ ++E     ET SP
Sbjct: 202  VDKEEVQAEADKKDETESP 220


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
            predicted protein [Populus trichocarpa]
          Length = 218

 Score =  244 bits (622), Expect = 4e-62
 Identities = 123/193 (63%), Positives = 153/193 (79%), Gaps = 6/193 (3%)
 Frame = -1

Query: 1014 GAEVAPIVQLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKFLKHKDSGK 835
            GA+VAPIV+LEEVAV+TGEE E  +LDLK+KLYRFDK+GNQWKERG GTVK LKHK+SGK
Sbjct: 25   GAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESGK 84

Query: 834  VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 655
            VRLVMRQSKTLKICANH ++P MSVQEH G++KSCVWHA DF+D ELK ELFCIRF SVE
Sbjct: 85   VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 654  NCKTFMQKFEGITDVVE--DENREGSAAAELLERQLNINDGKTEK-AGEKVPVAADEEKP 484
            NCKTFM+ F+ + +  E  +EN + + AA+ LE+ L++   KTE+ AGE+ P A   E+ 
Sbjct: 145  NCKTFMEMFQEVAESQESKEENEDATVAADALEK-LSVEGKKTEENAGEEAPAATKNEET 203

Query: 483  ESE---DGETRSP 454
            +++    GE  +P
Sbjct: 204  KTDTDKKGEKPAP 216


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
            lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
            ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  243 bits (620), Expect = 7e-62
 Identities = 127/192 (66%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
 Frame = -1

Query: 1014 GAEVAPIVQLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKFLKHKDSGK 835
            GA+VAPIV+LEEVAVTTGEE E  +LDLKAK+YRFDKEGNQWKERG GTVK LKHK +GK
Sbjct: 24   GAQVAPIVRLEEVAVTTGEEDEDAVLDLKAKMYRFDKEGNQWKERGAGTVKLLKHKQTGK 83

Query: 834  VRLVMRQSKTLKICANHAIVPGMSVQEHGGSEKSCVWHAVDFSDEELKAELFCIRFGSVE 655
            VRLVMRQSKTLKICANH I  GMSVQEH G+EKSC+WHA DFSD ELK ELFCIRF S+E
Sbjct: 84   VRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIE 143

Query: 654  NCKTFMQKFEGITD--VVEDENREGSAAAELLER---QLNINDGKTEKAGEKVPVAADEE 490
            NCKTFM+KF  I +   V  E+ EG  AA L+E    +   ND K ++A EK P   ++E
Sbjct: 144  NCKTFMEKFTEIAESQQVGKESTEGDEAAGLIENLSVEEKKNDEKAKEAEEKEPAKEEKE 203

Query: 489  -KPESEDGETRS 457
             K E E+ E ++
Sbjct: 204  AKKEKEEEEKKT 215


Top