BLASTX nr result

ID: Coptis25_contig00010094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010094
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-44
ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-43
emb|CBI26352.3| unnamed protein product [Vitis vinifera]              140   2e-42
ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   140   2e-42
ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like ...   137   1e-41

>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  149 bits (375), Expect(2) = 7e-44
 Identities = 69/105 (65%), Positives = 88/105 (83%)
 Frame = +2

Query: 233 VIEMIREYENYVGPGSILEILSDEPLEERVKATKLVGQDKLKNIRVSHRIGNRMSYDVLK 412
           V+EMI EY+NY+GPGSILEILSD PL+ER++ + +  Q KL+N+RVSHRIGN M++D L+
Sbjct: 491 VVEMIEEYDNYLGPGSILEILSDVPLDERMRTSSIASQRKLENVRVSHRIGNPMNFDALQ 550

Query: 413 EAILDIQNSFKKQEEVPFSIAVISDTKWLHGDPSRGDKQAAYSLL 547
           E ILDIQNS KK E++ FSI VISD +WL GDPSR DKQ+A+SL+
Sbjct: 551 ETILDIQNSLKKDEDISFSIVVISDREWLIGDPSRADKQSAFSLI 595



 Score = 53.9 bits (128), Expect(2) = 7e-44
 Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
 Frame = +3

Query: 33  LEDHSAEHIM--ELKRARVVNTVRRPLKSGSKASDLSFGPKERILMLGWR 176
           LED+S    +  EL++ R+ N V+RP +SGSKASD S GPKE +L LGWR
Sbjct: 439 LEDNSDNLNLPTELRKTRLKNIVKRPNRSGSKASDWSLGPKECVLFLGWR 488


>ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|222851474|gb|EEE89021.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score =  147 bits (372), Expect(2) = 1e-43
 Identities = 70/105 (66%), Positives = 87/105 (82%)
 Frame = +2

Query: 233 VIEMIREYENYVGPGSILEILSDEPLEERVKATKLVGQDKLKNIRVSHRIGNRMSYDVLK 412
           V+EMI EY+NY+GPGS+LEILSD PL+ER + + +  Q KLKNI+VSHRIGN M++D L+
Sbjct: 402 VVEMIDEYDNYLGPGSVLEILSDVPLDERKRTSSVANQRKLKNIQVSHRIGNPMNFDALQ 461

Query: 413 EAILDIQNSFKKQEEVPFSIAVISDTKWLHGDPSRGDKQAAYSLL 547
           E ILDIQNSF K E++ FSI VISD +WL GDPSR DKQ+A+SLL
Sbjct: 462 ETILDIQNSFNKDEDISFSIVVISDREWLLGDPSRADKQSAFSLL 506



 Score = 54.3 bits (129), Expect(2) = 1e-43
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +3

Query: 60  MELKRARVVNTVRRPLKSGSKASDLSFGPKERILMLGWR 176
           +EL++ R+ N V+R  +SGSKASD S GPKERIL LGWR
Sbjct: 361 IELRKTRLENIVKRSNRSGSKASDWSLGPKERILFLGWR 399


>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  140 bits (352), Expect(2) = 2e-42
 Identities = 67/105 (63%), Positives = 85/105 (80%)
 Frame = +2

Query: 233 VIEMIREYENYVGPGSILEILSDEPLEERVKATKLVGQDKLKNIRVSHRIGNRMSYDVLK 412
           V+EMI EY+NY+GPGS+LEILSD PL++R +A+   G  K+KNI+VSHR+GN M+YD L+
Sbjct: 596 VVEMIEEYDNYLGPGSVLEILSDVPLDDRNRASNFAGHGKVKNIQVSHRVGNPMNYDTLR 655

Query: 413 EAILDIQNSFKKQEEVPFSIAVISDTKWLHGDPSRGDKQAAYSLL 547
           E IL+I++SFKK E VP SI VISD + L GDPSR DK +AYSLL
Sbjct: 656 ETILNIRSSFKKGESVPLSIVVISDRECLLGDPSRADKHSAYSLL 700



 Score = 57.8 bits (138), Expect(2) = 2e-42
 Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3   ETLTSSDPLILEDH--SAEHIMELKRARVVNTVRRPLKSGSKASDLSFGPKERILMLGWR 176
           ET T  +  +LE +  ++ + ++L + RV N V+RP K GSKASD S GPKER+L++GWR
Sbjct: 534 ETNTIQNLEVLEKNGGASHYALDLIKMRVENIVKRPTKPGSKASDWSLGPKERVLLIGWR 593


>ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 729

 Score =  140 bits (352), Expect(2) = 2e-42
 Identities = 67/105 (63%), Positives = 85/105 (80%)
 Frame = +2

Query: 233 VIEMIREYENYVGPGSILEILSDEPLEERVKATKLVGQDKLKNIRVSHRIGNRMSYDVLK 412
           V+EMI EY+NY+GPGS+LEILSD PL++R +A+   G  K+KNI+VSHR+GN M+YD L+
Sbjct: 479 VVEMIEEYDNYLGPGSVLEILSDVPLDDRNRASNFAGHGKVKNIQVSHRVGNPMNYDTLR 538

Query: 413 EAILDIQNSFKKQEEVPFSIAVISDTKWLHGDPSRGDKQAAYSLL 547
           E IL+I++SFKK E VP SI VISD + L GDPSR DK +AYSLL
Sbjct: 539 ETILNIRSSFKKGESVPLSIVVISDRECLLGDPSRADKHSAYSLL 583



 Score = 57.8 bits (138), Expect(2) = 2e-42
 Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3   ETLTSSDPLILEDH--SAEHIMELKRARVVNTVRRPLKSGSKASDLSFGPKERILMLGWR 176
           ET T  +  +LE +  ++ + ++L + RV N V+RP K GSKASD S GPKER+L++GWR
Sbjct: 417 ETNTIQNLEVLEKNGGASHYALDLIKMRVENIVKRPTKPGSKASDWSLGPKERVLLIGWR 476


>ref|XP_003535417.1| PREDICTED: probable ion channel CASTOR-like [Glycine max]
          Length = 788

 Score =  137 bits (345), Expect(2) = 1e-41
 Identities = 67/105 (63%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
 Frame = +2

Query: 236 IEMIREYENYVGPGSILEILSDEPLEERV-KATKLVGQDKLKNIRVSHRIGNRMSYDVLK 412
           +EMI+EY+NY+GPGS+LE+LSD PL++R+ KA+ + G +KL+N+RVSHRIGN M YD LK
Sbjct: 539 VEMIQEYDNYLGPGSVLEVLSDTPLDDRINKASNIHGHNKLRNVRVSHRIGNPMDYDTLK 598

Query: 413 EAILDIQNSFKKQEEVPFSIAVISDTKWLHGDPSRGDKQAAYSLL 547
           E IL IQNS  K E+VP SIAVISD  WL GDPS+ D+ +AY+LL
Sbjct: 599 ETILHIQNSL-KNEDVPMSIAVISDRDWLLGDPSKADRLSAYALL 642



 Score = 58.2 bits (139), Expect(2) = 1e-41
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 39  DHSAEHIMELKRARVVNTVRRPLKSGSKASDLSFGPKERILMLGWR 176
           +   EH +EL + R+ N V+RP +SGSKASD + GPKE IL+LGWR
Sbjct: 490 EKDVEHAIELSKVRLANIVKRPNRSGSKASDGNLGPKECILLLGWR 535


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