BLASTX nr result

ID: Coptis25_contig00010092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010092
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280615.1| PREDICTED: ABC transporter I family member 1...   364   2e-98
ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
emb|CBI37536.3| unnamed protein product [Vitis vinifera]              347   3e-93
ref|XP_004147344.1| PREDICTED: ABC transporter I family member 1...   345   1e-92
ref|XP_004165768.1| PREDICTED: ABC transporter I family member 1...   344   3e-92

>ref|XP_002280615.1| PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis
           vinifera]
          Length = 271

 Score =  364 bits (935), Expect = 2e-98
 Identities = 186/269 (69%), Positives = 221/269 (82%), Gaps = 9/269 (3%)
 Frame = +1

Query: 25  MSHSALMRASAYFSP-LHAAAPTSNV--------VTENLAIEGRNLSYTVKTKTGKCVPI 177
           M++SAL R+SA   P LH+  PT +V        VT+N AIEG++L+Y+V T+ G+  PI
Sbjct: 1   MNYSALSRSSALHLPNLHSTNPTRSVSLSIRSCIVTQNDAIEGQSLNYSVTTRLGQLTPI 60

Query: 178 LKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVV 357
           LKDCS+ IPSGQLWMLLGPNGCGKSTLLK+LAGLL PT GTLYVK+P+SFVFQNPDHQVV
Sbjct: 61  LKDCSIRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKKPKSFVFQNPDHQVV 120

Query: 358 LPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGAL 537
           +PTVEADVAFGLGK NLT +EV++RV+KALDAVG+SDY+QRPVQTLSGGQKQRVAIAGAL
Sbjct: 121 MPTVEADVAFGLGKFNLTIEEVRSRVSKALDAVGISDYMQRPVQTLSGGQKQRVAIAGAL 180

Query: 538 AEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYME 717
           AEACKV            +DQ+GVIKAVKNS+    EVTALWVTHR+EELEYADGAVYME
Sbjct: 181 AEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTALWVTHRMEELEYADGAVYME 240

Query: 718 DGKVIMHSDASSIRGFLKERISSYTDKIK 804
           DG+V+MH +A+SI  F+K R SSY +++K
Sbjct: 241 DGRVVMHGNAASIMDFVKARQSSYLNQLK 269


>ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|222855693|gb|EEE93240.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  350 bits (899), Expect = 3e-94
 Identities = 172/231 (74%), Positives = 199/231 (86%)
 Frame = +1

Query: 109 NLAIEGRNLSYTVKTKTGKCVPILKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKP 288
           N+AIEGRNL++++KT+ G  VPILKDCSL IPSGQLWMLLGPNGCGKSTLLK+LAGLL P
Sbjct: 9   NIAIEGRNLNFSIKTRKGDLVPILKDCSLSIPSGQLWMLLGPNGCGKSTLLKILAGLLNP 68

Query: 289 THGTLYVKRPRSFVFQNPDHQVVLPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSD 468
           T GTLY+KRP+SFVFQNPDHQVV+PTVEADV+FGLGK+NLT+DEVK  V+KALDAVGMS 
Sbjct: 69  TSGTLYLKRPKSFVFQNPDHQVVMPTVEADVSFGLGKLNLTEDEVKCTVSKALDAVGMSA 128

Query: 469 YLQRPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEE 648
           Y+QRPVQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAVKNSL+  ++
Sbjct: 129 YMQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVKNSLNASDD 188

Query: 649 VTALWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKI 801
           VTALWVTHRLEELEYADGA+YME+GKV+   D SSI  F++ R SSY ++I
Sbjct: 189 VTALWVTHRLEELEYADGALYMENGKVVKQGDGSSIMNFIEARQSSYINRI 239


>emb|CBI37536.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/251 (70%), Positives = 206/251 (82%), Gaps = 9/251 (3%)
 Frame = +1

Query: 25  MSHSALMRASAYFSP-LHAAAPTSNV--------VTENLAIEGRNLSYTVKTKTGKCVPI 177
           M++SAL R+SA   P LH+  PT +V        VT+N AIEG++L+Y+V T+ G+  PI
Sbjct: 1   MNYSALSRSSALHLPNLHSTNPTRSVSLSIRSCIVTQNDAIEGQSLNYSVTTRLGQLTPI 60

Query: 178 LKDCSLHIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVV 357
           LKDCS+ IPSGQLWMLLGPNGCGKSTLLK+LAGLL PT GTLYVK+P+SFVFQNPDHQVV
Sbjct: 61  LKDCSIRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKKPKSFVFQNPDHQVV 120

Query: 358 LPTVEADVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGAL 537
           +PTVEADVAFGLGK NLT +EV++RV+KALDAVG+SDY+QRPVQTLSGGQKQRVAIAGAL
Sbjct: 121 MPTVEADVAFGLGKFNLTIEEVRSRVSKALDAVGISDYMQRPVQTLSGGQKQRVAIAGAL 180

Query: 538 AEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYME 717
           AEACKV            +DQ+GVIKAVKNS+    EVTALWVTHR+EELEYADGAVYME
Sbjct: 181 AEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTALWVTHRMEELEYADGAVYME 240

Query: 718 DGKVIMHSDAS 750
           DG+V+MH   S
Sbjct: 241 DGRVVMHGSRS 251


>ref|XP_004147344.1| PREDICTED: ABC transporter I family member 10, chloroplastic-like
           [Cucumis sativus]
          Length = 267

 Score =  345 bits (885), Expect = 1e-92
 Identities = 173/262 (66%), Positives = 205/262 (78%)
 Frame = +1

Query: 16  VNSMSHSALMRASAYFSPLHAAAPTSNVVTENLAIEGRNLSYTVKTKTGKCVPILKDCSL 195
           + S S + +  +    SPL +  P+    TEN+AIEGRNL++++ TK GK VPIL+DCSL
Sbjct: 3   LKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRNLNFSITTKQGKSVPILRDCSL 62

Query: 196 HIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVVLPTVEA 375
            IPSG+ WMLLGPNGCGKSTLLKVLAGLL  T G +YVK+P+ FVFQNPD+QVV+PTVEA
Sbjct: 63  RIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTVEA 122

Query: 376 DVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGALAEACKV 555
           DVAFGLGK+NL  DEVK+RV +AL AVGMS YLQR VQTLSGGQKQRVAIAGALAEACKV
Sbjct: 123 DVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKV 182

Query: 556 XXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYMEDGKVIM 735
                       +DQ GVIKAV+NSL   E+VTALWVTHRLEELEYADGA+YMEDGKV+M
Sbjct: 183 LLLDELTTFLDENDQTGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVVM 242

Query: 736 HSDASSIRGFLKERISSYTDKI 801
           H D +SI+ F++ + S Y  +I
Sbjct: 243 HGDVASIQSFIQTKQSDYIKRI 264


>ref|XP_004165768.1| PREDICTED: ABC transporter I family member 10, chloroplastic-like
           [Cucumis sativus]
          Length = 267

 Score =  344 bits (882), Expect = 3e-92
 Identities = 172/262 (65%), Positives = 206/262 (78%)
 Frame = +1

Query: 16  VNSMSHSALMRASAYFSPLHAAAPTSNVVTENLAIEGRNLSYTVKTKTGKCVPILKDCSL 195
           + S S + +  +    SPL +  P+    TEN+AIEGR+L++++ TK GK VPIL+DCSL
Sbjct: 3   LKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRDLNFSITTKQGKSVPILRDCSL 62

Query: 196 HIPSGQLWMLLGPNGCGKSTLLKVLAGLLKPTHGTLYVKRPRSFVFQNPDHQVVLPTVEA 375
            IPSG+ WMLLGPNGCGKSTLLKVLAGLL  T G +YVK+P+ FVFQNPD+QVV+PTVEA
Sbjct: 63  RIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTVEA 122

Query: 376 DVAFGLGKVNLTQDEVKARVAKALDAVGMSDYLQRPVQTLSGGQKQRVAIAGALAEACKV 555
           DVAFGLGK+NL  DEVK+RV +AL AVGMS YLQR VQTLSGGQKQRVAIAGALAEACKV
Sbjct: 123 DVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKV 182

Query: 556 XXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTALWVTHRLEELEYADGAVYMEDGKVIM 735
                       +DQ+GVIKAV+NSL   E+VTALWVTHRLEELEYADGA+YMEDGKV+M
Sbjct: 183 LLLDELTTFLDENDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVVM 242

Query: 736 HSDASSIRGFLKERISSYTDKI 801
           H D +SI+ F++ + S Y  +I
Sbjct: 243 HGDVASIQSFIQTKQSDYIKRI 264


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