BLASTX nr result

ID: Coptis25_contig00010089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010089
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531252.1| conserved hypothetical protein [Ricinus comm...   169   7e-40
ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38
ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]   155   1e-35
ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago ...   110   4e-22

>ref|XP_002531252.1| conserved hypothetical protein [Ricinus communis]
           gi|223529137|gb|EEF31116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score =  169 bits (427), Expect = 7e-40
 Identities = 84/182 (46%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
 Frame = -2

Query: 666 ASQNLSPLICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNES 487
           A+Q+LS   CE+ +++AKNLE  S GNLF+RY+L +G++KRI++  QE+ S  DL+WNE 
Sbjct: 4   ATQSLS---CEISIVQAKNLELKSHGNLFVRYYLSSGHNKRIQINTQEISSKSDLFWNEF 60

Query: 486 TTLECLGAEDTMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTNLS 307
            +LECLG +D++N LKQ+SVVFELRWR   ++ GK G GS+LL R +I WK VL S  + 
Sbjct: 61  FSLECLGTQDSINNLKQESVVFELRWRNTKSILGKIG-GSQLLGRAKIPWKTVLESPKME 119

Query: 306 IEKWI--TSAKTSKFVPEGLKPPALQISMNIQDPRTLKIPKRSHAVRSINGNVCG-CKNG 136
           IEKW+   S K    + + +KPP++QI++ ++ P  + + KR+  +R    + CG CK+ 
Sbjct: 120 IEKWVMMVSKKNCSVLADDVKPPSVQIALRVRVPEMVAMEKRNGKLRKWENDDCGCCKDS 179

Query: 135 EC 130
            C
Sbjct: 180 GC 181


>ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|222853469|gb|EEE91016.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  165 bits (417), Expect = 1e-38
 Identities = 81/174 (46%), Positives = 120/174 (68%), Gaps = 2/174 (1%)
 Frame = -2

Query: 645 LICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLG 466
           L CE+++++AKN+EF S G+LF+RY+L TGN KRI+L ++E+ +  +L+WNES +LEC G
Sbjct: 4   LSCEIEILQAKNVEFKSHGSLFVRYYLSTGNSKRIQLNSREISAKANLFWNESFSLECSG 63

Query: 465 AEDTMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTNLSIEKWITS 286
            ED++N LKQQ+VVFELRWR  + + GK G GS+LL R E+ WK V+ S  L +E+W+T 
Sbjct: 64  TEDSINNLKQQTVVFELRWRSTNPILGKIG-GSQLLGRAEVPWKTVVESPKLEMERWVTM 122

Query: 285 AKTSKFVPEGLKPPALQISMNIQDPRTLKI-PKRSHAVRSINGNVCG-CKNGEC 130
                 VP+ +KPPA+QI+M ++ P   ++  K+    R    + CG CK+  C
Sbjct: 123 IPKKGSVPDDVKPPAVQIAMRVRVPAMAEMQEKKRRNGRLKRWDECGCCKDSGC 176


>ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|222856538|gb|EEE94085.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  155 bits (391), Expect = 1e-35
 Identities = 77/172 (44%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
 Frame = -2

Query: 636 ELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGAED 457
           E+++ +AKN+E  S G+LF+RY+L  G +KRI+LK++E+ S  +L+WNES +LEC+G ED
Sbjct: 16  EIEIFQAKNIEVKSHGSLFVRYYLSAGKNKRIQLKSREISSKSNLFWNESFSLECIGTED 75

Query: 456 TMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTNLSIEKWITSAKT 277
           ++N LKQ++VVFELRWR  + +  K G GS+LL R E+ WK VL S NL +E W+     
Sbjct: 76  SINNLKQETVVFELRWRNTNPILAKIG-GSQLLGRAEVPWKTVLESPNLEMESWVMMVPK 134

Query: 276 SKFVPEGLKPPALQISMNIQDPRTLKIPK---RSHAVRSINGNVCGCKNGEC 130
              VP+ +KPP++QI+M  + P   ++ K   R   +R  +G  C CK+  C
Sbjct: 135 KGSVPDDVKPPSVQIAMRARVPEMAEMEKKNRRDGRLRKRDGCGC-CKDSGC 185


>emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]
          Length = 194

 Score =  155 bits (391), Expect = 1e-35
 Identities = 80/182 (43%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
 Frame = -2

Query: 672 MGASQNLSPLICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWN 493
           MGASQ LS L CE++++RAKN+E  + G LF+RY+L  GN++R+ L ++E+ S  DL+W+
Sbjct: 1   MGASQCLSSLSCEIRIMRAKNIELKTEGKLFVRYYLSAGNNQRVGLNSREISSKSDLFWD 60

Query: 492 ESTTLECLGAEDTMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTN 313
           ES +LECLG+E+++  L Q+ VVFELRWR    + G+    S +L R EI W  V  S  
Sbjct: 61  ESFSLECLGSEESIQSLMQERVVFELRWRSKVPVLGRVR-KSHVLGRVEIPWTSVFASKE 119

Query: 312 LSIEKWITSAKT-SKFVPEGLKPPALQISMNIQDPRTLKIPKRSHAVRSINGNVCGCKNG 136
           + IEKW++   T S+ V +  +PPALQ++M ++ P   K+ +RS   R +  + CGC +G
Sbjct: 120 MEIEKWVSMVSTGSRVVDQDGQPPALQVAMKVRIP---KVAERSR--RVMKWDECGCTDG 174

Query: 135 EC 130
            C
Sbjct: 175 GC 176


>ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago truncatula]
           gi|355491007|gb|AES72210.1| hypothetical protein
           MTR_3g087280 [Medicago truncatula]
          Length = 392

 Score =  110 bits (274), Expect = 4e-22
 Identities = 64/171 (37%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
 Frame = -2

Query: 639 CELKVIRAKNLEFV-STGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGA 463
           CEL++I+A+N+EF+ ST NLF R +L TGNDKRI+L ++ V +    +W+ES  L+C   
Sbjct: 14  CELRIIQARNIEFIKSTKNLFARLYLPTGNDKRIQLNSKSVSTKSVPFWDESFNLDCSCP 73

Query: 462 EDTMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTNLSIEKWITSA 283
           ++ +  L QQS+V ELR RK          GS+L+ + +I WK +L + N+ ++KW+   
Sbjct: 74  QEFLENLNQQSLVLELRQRKI--------WGSQLIGKGDIPWKVILEAQNMELKKWLKMD 125

Query: 282 KTS-KFVPEGL-KPPALQISMNIQDPRTLKIPKRSHAVRSINGNVCGCKNG 136
             S     EG+   P +++ + I+    +++ K++   R  N N CGCKNG
Sbjct: 126 LVSGSECKEGMFSTPEVEVEIKIRVASVVEMEKQNKR-RLNNWNECGCKNG 175



 Score =  105 bits (262), Expect = 9e-21
 Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
 Frame = -2

Query: 639 CELKVIRAKNLEFV-STGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGA 463
           CEL++I+A+N+E V ST NLF R +L TGN+KRI+L ++ V +    +W+ES  L+C   
Sbjct: 207 CELRIIQARNVESVKSTKNLFARLYLPTGNNKRIQLNSKSVSTKSVPFWDESFNLDCSCP 266

Query: 462 EDTMNKLKQQSVVFELRWRKPSTMFGKFGVGSKLLFRTEIAWKDVLNSTNLSIEKWITSA 283
           ++ +  L QQS+  ELR RK          GS+L+ + EI WK +L S N+ ++KW+   
Sbjct: 267 QEFLENLNQQSLEVELRQRKM--------WGSQLIGKGEIPWKVILESQNMELKKWLKMD 318

Query: 282 KTSKF-VPEGLKP-PALQISMNIQDPRTLKIPKRSHAVRSINGNVCGCKNG 136
             S+    E + P P +++ + I+     ++ K++   R  N N CGCKNG
Sbjct: 319 LVSRSDCKEAMFPTPEVEVEIKIRVASVAEMEKKNKR-RLNNWNECGCKNG 368


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