BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010083
         (3190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...  1161   0.0  
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...  1085   0.0  
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...  1075   0.0  
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...  1020   0.0  
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar...  1006   0.0  

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Vitis vinifera]
            gi|297745081|emb|CBI38673.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 573/906 (63%), Positives = 716/906 (79%), Gaps = 19/906 (2%)
 Frame = +2

Query: 137  MTSFKFFTALDIYDTNSSLFIGNP-------FTRLKPITVSRLSTELVDEEDYSVGKENL 295
            M S KF  ++D YD+N   F  NP       F R+KPI +SRL  E  D  D +   +N+
Sbjct: 1    MASLKFSVSVDTYDSNKFHFSVNPSLPIINSFARVKPINISRLEAESWDTSDSNSVVDNI 60

Query: 296  -------GLRNPIAEKN--KRNIWKRFHGVKR-ESREPF--FRKSGKEQVQEEKRSSFVC 439
                   G  N I E +  + +IW+R  GVKR   R+P   FR    +   EE++S    
Sbjct: 61   KTWNKDSGSENLILESSNFRNDIWRRVQGVKRVRRRDPNSKFRSIRNDNGHEEQKSVNHF 120

Query: 440  NGKLSVELENAVGNVGPESSVEQCNIILRQLEQCNDEKTLTFFEWMRSNGKLRENVSAYK 619
            + ++ V   N  G +GPE SVE+CN IL+ LE+C+D KT+ FFEWMR NGKL  NVSAY 
Sbjct: 121  DDEIDV---NEYG-IGPELSVERCNAILKGLERCSDSKTMKFFEWMRENGKLEGNVSAYN 176

Query: 620  FALRVLGRKEDWETAEMLLHELITDSGLALNFLLFNTLIYACYRRGLEKLGTKWFRLMLE 799
             ALRVLGR+ DW+ AE ++ E+  DS   +NF ++NTLIYACY++G  +LGTKWFRLMLE
Sbjct: 177  LALRVLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIYACYKQGHVELGTKWFRLMLE 236

Query: 800  NAVKPNIATFGMLMSLYQKGGNVVEAEFAFHKMRSLKLKCQSAYSAMITIFTRLGLYDKS 979
            N V+PN+ATFGM+MSLYQKG NV ++E+AF +MRS  + CQSAYSAMITI+TR+ LYDK+
Sbjct: 237  NGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKA 296

Query: 980  EEIIHFMKEDDMVPNSENWLVQINAYSQQGKLEDAERVLMSMQEAGVPPNIVAYNTMITG 1159
            EE+I F++ED ++ N ENWLV +NAYSQQGKL++AERVL SMQ AG  PNIVAYN +ITG
Sbjct: 297  EEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITG 356

Query: 1160 YGKASDMDSAERIFQRLQIFGLEPDETTYRTMVEGWGRANHLKNAKCYYQKLKHSGFAPN 1339
            YGKAS+MD+A+ IF+ L+  GLEPDE+TYR+M+EGWGRA + K A+ YY +LK  GF PN
Sbjct: 357  YGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPN 416

Query: 1340 SSNMFTMINLQARCNDEEGTLETLEDMRRMGCQYSSILSSLLQAYEKVERVDKVPLVVRG 1519
            SSN++TMINLQA+  D E    TL+DM+R+GCQYSS+L +LLQAYE+  R+D+VPL+++G
Sbjct: 417  SSNLYTMINLQAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKG 476

Query: 1520 SFYEHILVDQNSCSILVMAYVKHHLIDDALRILQDKQWKDLIFEDNLYHLLICSCKESGM 1699
            SFYE++LV+Q SCSILVMAYVKH L+DDA+++LQ+KQWKD IFEDNLYHL+ICSCKE G 
Sbjct: 477  SFYEYVLVNQTSCSILVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGR 536

Query: 1700 HEEAIKIFIHMPKSNANPNLHITSTMIDIYSIIGRFEEAKDLYLKLISSGNNLDMVAYSI 1879
             E A+KI+  MP  N  PNLHI  TMIDIYS +GRF +A++LYLKL SS  +LDM+A+SI
Sbjct: 537  LENAVKIYSQMP--NKKPNLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSI 594

Query: 1880 VVRMYVKAGHLEDACLVLDKMANQKDIVPDTFLFRDMLRIYQKCGLQEKLAELYFKLLKC 2059
            VVRMYVK+G L+DAC VL+ M  QK+IVPD +LF DMLRIYQ+CG+ +KL +LY+++LK 
Sbjct: 595  VVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKT 654

Query: 2060 GINWDQEMYNCVINCCARALPVDELTRIFDEMLQCDFSPNTITFNIMLDVYGKERLLKKA 2239
            G+ WD EMYNCVINCCARALPVDEL+R+FDEML   F+PNTIT N+MLDVYGK RL KKA
Sbjct: 655  GVTWDSEMYNCVINCCARALPVDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKA 714

Query: 2240 RKVFWMARTRGLADVISYNTIIAAYGQNKDFTNMRATVRKMEFSGFSVSLEAYNCMLDAY 2419
            RKV W+AR RGL DVISYNTIIAAYGQ+KD   M +TVR+M+F+GFSVSLE YNCMLD+Y
Sbjct: 715  RKVLWLARKRGLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSY 774

Query: 2420 GKDSQMENFRSVLQRLKESSCVFDHYTYGVLINIYGEQGWIEEVASVLSELKEYGLEPNL 2599
            GK+ Q+E+FRSVL+R+KESSC  DHYTY ++INIYGEQGWIEEVA+VL+ELKE GL P+L
Sbjct: 775  GKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDL 834

Query: 2600 CGYNSLIKAYGVAGMVEEAVDVVKEMREKGIEPDHITYINLVHALQRNDNFLEAVKWSLW 2779
            C YN+LIKAYG+AGMVE+AV +VKEMRE GI+PD ITYINL++AL++ND FLEAVKWSLW
Sbjct: 835  CSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSLW 894

Query: 2780 MKQMGM 2797
            MKQMG+
Sbjct: 895  MKQMGL 900


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score = 1085 bits (2806), Expect = 0.0
 Identities = 547/926 (59%), Positives = 692/926 (74%), Gaps = 39/926 (4%)
 Frame = +2

Query: 137  MTSFKFFTALDIYDTNSSLFIGNPF--------------------------TRLKPITVS 238
            M S +   +LD +D+    F  NP                           T   P+ VS
Sbjct: 37   MASLRLTISLDTFDSKKPNFSRNPLQLSTHTSPFSISSSTPSPGACIITTLTTFSPVKVS 96

Query: 239  RLSTELVDEE---------DYSVGKENLGLRNPIAEKNKRNIWKRFHG--VKRESREPFF 385
            R+ TEL +++          +    E L  RNP    +KR I K++ G   KR  R+  F
Sbjct: 97   RIETELFEDDVVLSTSNDLPHECINEGLIDRNP---NSKREIRKKYRGGAKKRGKRKVGF 153

Query: 386  RKSGKEQ-VQEEKRSSFVCNGKLSVELENAVGNVGPESSVEQCNIILRQLEQCN-DEKTL 559
            + + K   +++E    FV  G+L V       N+    S+E CN+IL++LE+C+ D+K+L
Sbjct: 154  KFNYKRNGIEQEIEDLFVEGGELDVNYSVIHCNL----SLEHCNLILKRLERCSSDDKSL 209

Query: 560  TFFEWMRSNGKLRENVSAYKFALRVLGRKEDWETAEMLLHELITDSGLALNFLLFNTLIY 739
             FFEWMR+NGKL +N++AY   LRVLGR+EDW TAE ++ E+    G  L+F +FNTLIY
Sbjct: 210  RFFEWMRNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIY 269

Query: 740  ACYRRGLEKLGTKWFRLMLENAVKPNIATFGMLMSLYQKGGNVVEAEFAFHKMRSLKLKC 919
            AC RRG   LG KWFR+MLE  V+PNIATFGMLM LYQKG NV EAEF F KMRS  + C
Sbjct: 270  ACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIIC 329

Query: 920  QSAYSAMITIFTRLGLYDKSEEIIHFMKEDDMVPNSENWLVQINAYSQQGKLEDAERVLM 1099
            QSAYSAMITI+TRL LY+K+EEII  M ED +  N ENWLV +NAYSQQG+LE+AE+VL+
Sbjct: 330  QSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLV 389

Query: 1100 SMQEAGVPPNIVAYNTMITGYGKASDMDSAERIFQRLQIFGLEPDETTYRTMVEGWGRAN 1279
             MQEA   PNIVA+NT+ITGYGK S+M +A+R+F  +Q  GLEPDETTYR+M+EGWGR  
Sbjct: 390  EMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTG 449

Query: 1280 HLKNAKCYYQKLKHSGFAPNSSNMFTMINLQARCNDEEGTLETLEDMRRMGCQYSSILSS 1459
            + K A+ YY++LK  G+ PNSSN++T+INLQA+ +D+EG + TL+DM ++GCQ+SSIL +
Sbjct: 450  NYKEAEWYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGT 509

Query: 1460 LLQAYEKVERVDKVPLVVRGSFYEHILVDQNSCSILVMAYVKHHLIDDALRILQDKQWKD 1639
            LL+AYEK  R++KVPL+++ SFY+H+LV+Q SCSILVM YVK+ L+D+AL++L DK+WKD
Sbjct: 510  LLKAYEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKD 569

Query: 1640 LIFEDNLYHLLICSCKESGMHEEAIKIFIHMPKSNANPNLHITSTMIDIYSIIGRFEEAK 1819
              FEDNLYHLLICSCKE G  E A++I+  MPKS   PNLHI+ T+IDIYS++G F EA+
Sbjct: 570  QTFEDNLYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAE 629

Query: 1820 DLYLKLISSGNNLDMVAYSIVVRMYVKAGHLEDACLVLDKMANQKDIVPDTFLFRDMLRI 1999
             LY +L  SG  LDMVA+SIVVRMYVKAG L+DAC VL  M  Q++I+PD +L+RDMLRI
Sbjct: 630  KLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRI 689

Query: 2000 YQKCGLQEKLAELYFKLLKCGINWDQEMYNCVINCCARALPVDELTRIFDEMLQCDFSPN 2179
            YQ+CG+  KL +LY K+LK  ++WDQE+YNC+INCCARALPV EL+R+F EMLQ  FSPN
Sbjct: 690  YQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPN 749

Query: 2180 TITFNIMLDVYGKERLLKKARKVFWMARTRGLADVISYNTIIAAYGQNKDFTNMRATVRK 2359
            TITFN+MLDVYGK +L  KA+++FWMAR RGL DVISYNT+IAAYG NKDF NM + VR 
Sbjct: 750  TITFNVMLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRN 809

Query: 2360 MEFSGFSVSLEAYNCMLDAYGKDSQMENFRSVLQRLKESSCVFDHYTYGVLINIYGEQGW 2539
            M+F GFSVSLEAYNCMLD YGK+ QME FR+VLQR+K+SS   DHYTY ++INIYGEQGW
Sbjct: 810  MQFDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGW 869

Query: 2540 IEEVASVLSELKEYGLEPNLCGYNSLIKAYGVAGMVEEAVDVVKEMREKGIEPDHITYIN 2719
            I+EVA VL+EL+E GL P+LC YN+LIKAYGVAGMVE+A+D+VKEMRE GIEPD ITY N
Sbjct: 870  IDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSN 929

Query: 2720 LVHALQRNDNFLEAVKWSLWMKQMGM 2797
            L+ ALQ+ND +LEAVKWSLWMKQ+G+
Sbjct: 930  LITALQKNDKYLEAVKWSLWMKQLGL 955


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Cucumis sativus]
          Length = 894

 Score = 1075 bits (2780), Expect = 0.0
 Identities = 514/813 (63%), Positives = 650/813 (79%), Gaps = 5/813 (0%)
 Frame = +2

Query: 368  SREPFF--RKSGKEQVQEEKRSSFVCNGKLSV---ELENAVGNVGPESSVEQCNIILRQL 532
            +R+ +F  +K  K         S  CN  +     EL+     +  + S+E CN IL++L
Sbjct: 80   ARKKYFTSKKPSKRAAGSHFSFSRNCNDNILFNGGELDVNYSTISSDLSLEDCNAILKRL 139

Query: 533  EQCNDEKTLTFFEWMRSNGKLRENVSAYKFALRVLGRKEDWETAEMLLHELITDSGLALN 712
            E+CND KTL FFEWMRSNGKL+ NVSAY   LRVLGR+EDW+ AE L+ E+  + G  L+
Sbjct: 140  EKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLD 199

Query: 713  FLLFNTLIYACYRRGLEKLGTKWFRLMLENAVKPNIATFGMLMSLYQKGGNVVEAEFAFH 892
            F +FNTLIYACY+    + GTKWFR+MLE  V+PN+ATFGMLM LYQK  ++ E+EFAF+
Sbjct: 200  FQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFN 259

Query: 893  KMRSLKLKCQSAYSAMITIFTRLGLYDKSEEIIHFMKEDDMVPNSENWLVQINAYSQQGK 1072
            +MR+  + C++AY++MITI+ R+ LYDK+EE+I  M+ED ++PN ENW+V +NAY QQGK
Sbjct: 260  QMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGK 319

Query: 1073 LEDAERVLMSMQEAGVPPNIVAYNTMITGYGKASDMDSAERIFQRLQIFGLEPDETTYRT 1252
            +E+AE V  SM+EAG   NI+AYNT+ITGYGKAS+MD+A+R+F  ++  G+EPDETTYR+
Sbjct: 320  MEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRS 379

Query: 1253 MVEGWGRANHLKNAKCYYQKLKHSGFAPNSSNMFTMINLQARCNDEEGTLETLEDMRRMG 1432
            M+EGWGRA + K A+ YY++LK  G+ PNSSN+FT+INLQA+  DE GTL+TL DM ++G
Sbjct: 380  MIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIG 439

Query: 1433 CQYSSILSSLLQAYEKVERVDKVPLVVRGSFYEHILVDQNSCSILVMAYVKHHLIDDALR 1612
            C+ SSI+ ++LQAYEK  R+  VP+++ GSFY  +L  Q SCSILVMAYVKH L+DDAL+
Sbjct: 440  CRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALK 499

Query: 1613 ILQDKQWKDLIFEDNLYHLLICSCKESGMHEEAIKIFIHMPKSNANPNLHITSTMIDIYS 1792
            +L++K+WKD  FE+NLYHLLICSCKE G  E AIKI+  +PK    PNLHIT TMIDIYS
Sbjct: 500  VLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYS 559

Query: 1793 IIGRFEEAKDLYLKLISSGNNLDMVAYSIVVRMYVKAGHLEDACLVLDKMANQKDIVPDT 1972
            I+GRF + + LYL L SSG  LD++AY++VVRMYVKAG LEDAC VLD MA Q+DIVPD 
Sbjct: 560  IMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDI 619

Query: 1973 FLFRDMLRIYQKCGLQEKLAELYFKLLKCGINWDQEMYNCVINCCARALPVDELTRIFDE 2152
            +L RDMLRIYQ+CG+  KLA+LY+++LK G++WDQEMYNCVINCC+RALPVDEL+R+FDE
Sbjct: 620  YLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDE 679

Query: 2153 MLQCDFSPNTITFNIMLDVYGKERLLKKARKVFWMARTRGLADVISYNTIIAAYGQNKDF 2332
            MLQC F+PNT+T N+MLDVYGK +L  KAR +F +A+ RGL D ISYNT+I+ YG+NKDF
Sbjct: 680  MLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDF 739

Query: 2333 TNMRATVRKMEFSGFSVSLEAYNCMLDAYGKDSQMENFRSVLQRLKESSCVFDHYTYGVL 2512
             NM +TV+KM+F+GFSVSLEAYNCMLDAYGK+ QMENFRSVLQR++E+S   DHYTY ++
Sbjct: 740  KNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIM 799

Query: 2513 INIYGEQGWIEEVASVLSELKEYGLEPNLCGYNSLIKAYGVAGMVEEAVDVVKEMREKGI 2692
            INIYGEQGWI+EVA VL+ELK  GLEP+L  YN+LIKAYG+AGMVEEA  +VKEMREK I
Sbjct: 800  INIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRI 859

Query: 2693 EPDHITYINLVHALQRNDNFLEAVKWSLWMKQM 2791
            EPD ITYIN++ ALQRND FLEAVKWSLWMKQM
Sbjct: 860  EPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 892



 Score = 89.7 bits (221), Expect = 4e-15
 Identities = 59/245 (24%), Positives = 112/245 (45%)
 Frame = +2

Query: 2060 GINWDQEMYNCVINCCARALPVDELTRIFDEMLQCDFSPNTITFNIMLDVYGKERLLKKA 2239
            G   D +++N +I  C ++  V++ T+ F  ML+C   PN  TF +++ +Y K+  +K++
Sbjct: 195  GSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKES 254

Query: 2240 RKVFWMARTRGLADVISYNTIIAAYGQNKDFTNMRATVRKMEFSGFSVSLEAYNCMLDAY 2419
               F   R  G+    +Y ++I  Y                               ++ Y
Sbjct: 255  EFAFNQMRNFGIVCETAYASMITIY-----------------------------IRMNLY 285

Query: 2420 GKDSQMENFRSVLQRLKESSCVFDHYTYGVLINIYGEQGWIEEVASVLSELKEYGLEPNL 2599
             K  +      V+Q ++E   + +   + V++N Y +QG +EE   V + ++E G   N+
Sbjct: 286  DKAEE------VIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNI 339

Query: 2600 CGYNSLIKAYGVAGMVEEAVDVVKEMREKGIEPDHITYINLVHALQRNDNFLEAVKWSLW 2779
              YN+LI  YG A  ++ A  +   ++  G+EPD  TY +++    R  N+  A  +   
Sbjct: 340  IAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKE 399

Query: 2780 MKQMG 2794
            +K+ G
Sbjct: 400  LKRRG 404


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297315195|gb|EFH45618.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 906

 Score = 1020 bits (2637), Expect = 0.0
 Identities = 511/920 (55%), Positives = 662/920 (71%), Gaps = 33/920 (3%)
 Frame = +2

Query: 137  MTSFKFFTALDIYDTNSSLFIGNPFT-----------------------RLKPITVSRLS 247
            M S +    LD +D+    F  NPF                        R+K I VSRL 
Sbjct: 1    MGSLRLSIPLDPFDSKRFHFSANPFQFPDQVPIFSVSTSVPATRIGSLIRVKKIRVSRLD 60

Query: 248  TEL------VDEEDYSVGKEN---LGLRNPIAEKNKRNIWKRFHGVKRESREPF-FRKSG 397
             E       +D +  +V + +   L   N +   N+R       G K++    F FR+  
Sbjct: 61   IEAKEAENAIDSDSVNVERSSNSKLKGSNTVTSGNQR-------GTKKDVARKFSFRRES 113

Query: 398  KEQVQEEKRSSFVCNGKLSVELENAVGNVGPESSVEQCNIILRQLEQCNDEKTLTFFEWM 577
             +    E  + FV NG++ V        + P  S+E  N IL++LE C+D   + FF+WM
Sbjct: 114  NDL---ELENLFVNNGEMDVNYSA----IKPGLSLEHYNAILKRLESCSDTNAIKFFDWM 166

Query: 578  RSNGKLRENVSAYKFALRVLGRKEDWETAEMLLHELITDSGLALNFLLFNTLIYACYRRG 757
            R  GKL  N  AY   LRVLGR+E+W  AE L+ EL    G   +F +FNT+IYAC ++G
Sbjct: 167  RCKGKLEGNFGAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIYACTKKG 226

Query: 758  LEKLGTKWFRLMLENAVKPNIATFGMLMSLYQKGGNVVEAEFAFHKMRSLKLKCQSAYSA 937
              KL +KWF++MLE  V+PN+AT GMLM LYQK  NV EAEFAF  MR  ++ C+SAYS+
Sbjct: 227  NVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVCESAYSS 286

Query: 938  MITIFTRLGLYDKSEEIIHFMKEDDMVPNSENWLVQINAYSQQGKLEDAERVLMSMQEAG 1117
            MITI+TRL LY+K+EE+I+ MK+D +    ENWLV +NAYSQQGK+E AE VL+SM+ AG
Sbjct: 287  MITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEAAG 346

Query: 1118 VPPNIVAYNTMITGYGKASDMDSAERIFQRLQIFGLEPDETTYRTMVEGWGRANHLKNAK 1297
              PNI+AYNT+ITGYGK S M++A+ +F RL   GLEPDET+YR+M+EGWGRA++ + A 
Sbjct: 347  FAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEAN 406

Query: 1298 CYYQKLKHSGFAPNSSNMFTMINLQARCNDEEGTLETLEDMRRMGCQYSSILSSLLQAYE 1477
             YYQ+LK  G+ PNSSN+FT+INLQA+  D +G ++T+EDM  +GCQY SIL  +LQAYE
Sbjct: 407  HYYQELKRCGYKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSILGIILQAYE 466

Query: 1478 KVERVDKVPLVVRGSFYEHILVDQNSCSILVMAYVKHHLIDDALRILQDKQWKDLIFEDN 1657
            KV ++D VP +++GSF+ HI ++Q S SILVMAY+KH ++DD L +L++K+W+D  FE +
Sbjct: 467  KVGKIDVVPYLLKGSFHNHIRLNQTSFSILVMAYIKHGMVDDCLALLREKKWRDSAFESH 526

Query: 1658 LYHLLICSCKESGMHEEAIKIFIHMPKSNANPNLHITSTMIDIYSIIGRFEEAKDLYLKL 1837
            LYHLLICSCKESG   +A+K++ H  +S+   NLHITSTMIDIY+++G F EA+ LYL L
Sbjct: 527  LYHLLICSCKESGQLTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYLNL 586

Query: 1838 ISSGNNLDMVAYSIVVRMYVKAGHLEDACLVLDKMANQKDIVPDTFLFRDMLRIYQKCGL 2017
             SSG  LD + +SIVVRMYVKAG LE+AC VL+ M  QKDIVPD +LFRDMLRIYQKC L
Sbjct: 587  KSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDL 646

Query: 2018 QEKLAELYFKLLKCGINWDQEMYNCVINCCARALPVDELTRIFDEMLQCDFSPNTITFNI 2197
            Q+KL  LY+++ K GI+WDQEMYNCVINCCARALP+DEL+R F+EM++  F+PNT+TFN+
Sbjct: 647  QDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTFNV 706

Query: 2198 MLDVYGKERLLKKARKVFWMARTRGLADVISYNTIIAAYGQNKDFTNMRATVRKMEFSGF 2377
            +LDVYGK +L KK  ++F +A+  G+ DVISYNTIIAAYG+NKDFTNM + ++ M+F GF
Sbjct: 707  LLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQFDGF 766

Query: 2378 SVSLEAYNCMLDAYGKDSQMENFRSVLQRLKESSCVFDHYTYGVLINIYGEQGWIEEVAS 2557
            SVSLEAYN +LDAYGKD QME FRS+L+R+K+S+   DHYTY ++INIYGEQGWI+EVA 
Sbjct: 767  SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAG 826

Query: 2558 VLSELKEYGLEPNLCGYNSLIKAYGVAGMVEEAVDVVKEMREKGIEPDHITYINLVHALQ 2737
            VL ELKE GL P+LC YN+LIKAYG+ GMVEEAV +VKEMR K I PD +TY NLV AL+
Sbjct: 827  VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTALR 886

Query: 2738 RNDNFLEAVKWSLWMKQMGM 2797
            +ND FLEA+KWSLWMKQMG+
Sbjct: 887  KNDEFLEAIKWSLWMKQMGI 906


>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635625|sp|O65567.2|PP342_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g30825, chloroplastic; Flags: Precursor
            gi|332660415|gb|AEE85815.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 501/881 (56%), Positives = 645/881 (73%)
 Frame = +2

Query: 155  FTALDIYDTNSSLFIGNPFTRLKPITVSRLSTELVDEEDYSVGKENLGLRNPIAEKNKRN 334
            F    I+ T +S  IG+    L  I VS L TE  +    S          P+       
Sbjct: 37   FVTSSIHATRASS-IGSSTRVLDKIRVSSLGTEANENAINSASAA------PVERSRSSK 89

Query: 335  IWKRFHGVKRESREPFFRKSGKEQVQEEKRSSFVCNGKLSVELENAVGNVGPESSVEQCN 514
            +     G K+     F  + G   ++ E  + FV NG++ V        + P  S+E CN
Sbjct: 90   LSGDQRGTKKYVARKFSFRRGSNDLELE--NLFVNNGEIDVNYSA----IKPGQSLEHCN 143

Query: 515  IILRQLEQCNDEKTLTFFEWMRSNGKLRENVSAYKFALRVLGRKEDWETAEMLLHELITD 694
             IL++LE C+D   + FF+WMR NGKL  N  AY   LRVLGR+E+W+ AE L+ EL   
Sbjct: 144  GILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGF 203

Query: 695  SGLALNFLLFNTLIYACYRRGLEKLGTKWFRLMLENAVKPNIATFGMLMSLYQKGGNVVE 874
                 ++ +FNT+IYAC ++G  KL +KWF +MLE  V+PN+AT GMLM LYQK  NV E
Sbjct: 204  HEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEE 263

Query: 875  AEFAFHKMRSLKLKCQSAYSAMITIFTRLGLYDKSEEIIHFMKEDDMVPNSENWLVQINA 1054
            AEFAF  MR   + C+SAYS+MITI+TRL LYDK+EE+I  MK+D +    ENWLV +NA
Sbjct: 264  AEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNA 323

Query: 1055 YSQQGKLEDAERVLMSMQEAGVPPNIVAYNTMITGYGKASDMDSAERIFQRLQIFGLEPD 1234
            YSQQGK+E AE +L+SM+ AG  PNI+AYNT+ITGYGK   M++A+ +F RL   GLEPD
Sbjct: 324  YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPD 383

Query: 1235 ETTYRTMVEGWGRANHLKNAKCYYQKLKHSGFAPNSSNMFTMINLQARCNDEEGTLETLE 1414
            ET+YR+M+EGWGRA++ + AK YYQ+LK  G+ PNS N+FT+INLQA+  D +G ++T+E
Sbjct: 384  ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443

Query: 1415 DMRRMGCQYSSILSSLLQAYEKVERVDKVPLVVRGSFYEHILVDQNSCSILVMAYVKHHL 1594
            DM  +GCQYSSIL  +LQAYEKV ++D VP V++GSF+ HI ++Q S S LVMAYVKH +
Sbjct: 444  DMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGM 503

Query: 1595 IDDALRILQDKQWKDLIFEDNLYHLLICSCKESGMHEEAIKIFIHMPKSNANPNLHITST 1774
            +DD L +L++K+W+D  FE +LYHLLICSCKESG   +A+KI+ H  +S+   NLHITST
Sbjct: 504  VDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITST 563

Query: 1775 MIDIYSIIGRFEEAKDLYLKLISSGNNLDMVAYSIVVRMYVKAGHLEDACLVLDKMANQK 1954
            MIDIY+++G F EA+ LYL L SSG  LD + +SIVVRMYVKAG LE+AC VL+ M  QK
Sbjct: 564  MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623

Query: 1955 DIVPDTFLFRDMLRIYQKCGLQEKLAELYFKLLKCGINWDQEMYNCVINCCARALPVDEL 2134
            DIVPD +LFRDMLRIYQKC LQ+KL  LY+++ K GI+W+QEMYNCVINCCARALP+DEL
Sbjct: 624  DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDEL 683

Query: 2135 TRIFDEMLQCDFSPNTITFNIMLDVYGKERLLKKARKVFWMARTRGLADVISYNTIIAAY 2314
            +  F+EM++  F+PNT+TFN++LDVYGK +L KK  ++F +A+  G+ DVISYNTIIAAY
Sbjct: 684  SGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAY 743

Query: 2315 GQNKDFTNMRATVRKMEFSGFSVSLEAYNCMLDAYGKDSQMENFRSVLQRLKESSCVFDH 2494
            G+NKD+TNM + ++ M+F GFSVSLEAYN +LDAYGKD QME FRS+L+R+K+S+   DH
Sbjct: 744  GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDH 803

Query: 2495 YTYGVLINIYGEQGWIEEVASVLSELKEYGLEPNLCGYNSLIKAYGVAGMVEEAVDVVKE 2674
            YTY ++INIYGEQGWI+EVA VL ELKE GL P+LC YN+LIKAYG+ GMVEEAV +VKE
Sbjct: 804  YTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKE 863

Query: 2675 MREKGIEPDHITYINLVHALQRNDNFLEAVKWSLWMKQMGM 2797
            MR + I PD +TY NLV AL+RND FLEA+KWSLWMKQMG+
Sbjct: 864  MRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904