BLASTX nr result

ID: Coptis25_contig00010076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010076
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512662.1| ATP binding protein, putative [Ricinus commu...   148   7e-34
ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   144   1e-32
ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   142   6e-32
ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   140   1e-31
ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   140   1e-31

>ref|XP_002512662.1| ATP binding protein, putative [Ricinus communis]
            gi|223548623|gb|EEF50114.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1369

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/117 (63%), Positives = 95/117 (81%)
 Frame = -3

Query: 354  HINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKG 175
            H++ Q PS P +  +F   L+RI+I V+LG +TGL  AIL A+++R ++RYMNRTPILKG
Sbjct: 1012 HLSTQPPS-PSRPSQFNTGLKRILISVILGVLTGLSGAILCAYLVRCLVRYMNRTPILKG 1070

Query: 174  PVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQE 4
            PVIFSPKIAS TLQ AL+++ QLLGSS NG YYRTVLDNGLT+AVKRL+PF++ + E
Sbjct: 1071 PVIFSPKIASKTLQSALASENQLLGSSSNGNYYRTVLDNGLTIAVKRLEPFESGSPE 1127


>ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1231

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/124 (56%), Positives = 96/124 (77%), Gaps = 6/124 (4%)
 Frame = -3

Query: 357  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 196
            +H++++ PS      SPP    +K   ++I++ ++LG VTGL+++ LFA V+R V++Y+N
Sbjct: 866  KHVSSEPPSPSRSTPSPPSSSGYKDDPRKIILSMVLGAVTGLVSSALFALVVRCVVQYLN 925

Query: 195  RTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 16
            RTPILKGPVIFSPKIA  TLQ AL+ +  LLGSSPNGKYY+TVLDNGLT+AVKRL PF++
Sbjct: 926  RTPILKGPVIFSPKIAPMTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFES 985

Query: 15   ATQE 4
             + E
Sbjct: 986  NSPE 989


>ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1228

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/124 (54%), Positives = 96/124 (77%), Gaps = 6/124 (4%)
 Frame = -3

Query: 357  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 196
            +H++++ PS      + P    +K   ++I++ ++LG VTGL+ ++LFA V+R V++Y+N
Sbjct: 863  KHVSSEPPSPSRPSSAAPSSSGYKDDPRKIILSMVLGAVTGLVCSVLFALVVRCVVQYLN 922

Query: 195  RTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 16
            RTPILKGPVIFSPKIAS TLQ AL+ +  LLGSSPNGKYY+T+LDNGLT+AVKRL PF++
Sbjct: 923  RTPILKGPVIFSPKIASKTLQSALAKENHLLGSSPNGKYYKTMLDNGLTIAVKRLTPFES 982

Query: 15   ATQE 4
             + E
Sbjct: 983  NSPE 986


>ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like, partial [Cucumis sativus]
          Length = 1194

 Score =  140 bits (354), Expect = 1e-31
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -3

Query: 387  YPSYGQPIPDEHINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVI 208
            + S G P+P       T S+P   P+FK  ++RI+  VLLG VTGL+ + LFA +IR  +
Sbjct: 834  FASSGPPLPT------TSSTPTSSPQFKNGVRRIIFSVLLGVVTGLMGSFLFACLIRSFV 887

Query: 207  RYMNRTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLD 28
            RY+N+TPILKGPVIFSP I   TL LAL N+ QLLGS+P+GKYYRT+LDNGLT+AVKRL+
Sbjct: 888  RYLNKTPILKGPVIFSPIIDPKTLHLALRNENQLLGSNPHGKYYRTILDNGLTIAVKRLE 947

Query: 27   PFDNATQE 4
              +N  ++
Sbjct: 948  GSENTARK 955


>ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Cucumis sativus]
          Length = 1191

 Score =  140 bits (354), Expect = 1e-31
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -3

Query: 387  YPSYGQPIPDEHINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVI 208
            + S G P+P       T S+P   P+FK  ++RI+  VLLG VTGL+ + LFA +IR  +
Sbjct: 831  FASSGPPLPT------TSSTPTSSPQFKNGVRRIIFSVLLGVVTGLMGSFLFACLIRSFV 884

Query: 207  RYMNRTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLD 28
            RY+N+TPILKGPVIFSP I   TL LAL N+ QLLGS+P+GKYYRT+LDNGLT+AVKRL+
Sbjct: 885  RYLNKTPILKGPVIFSPIIDPKTLHLALRNENQLLGSNPHGKYYRTILDNGLTIAVKRLE 944

Query: 27   PFDNATQE 4
              +N  ++
Sbjct: 945  GSENTARK 952


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