BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010074
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   139   5e-31
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   135   9e-30
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   129   6e-28
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  141 bits (355), Expect = 2e-31
 Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 35/282 (12%)
 Frame = -3

Query: 743 RFRCVSKAWYALLDDPAFVDRHFNNQSMERNCLNKSAIFLDPLNSIYSLDFETLNSRVID 564
           RFRCVSK+W   +D P F++ H    S     LN   + L    ++ ++D ++ +   I+
Sbjct: 22  RFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLN---LILRDATNLCTVDLDSPDFTSIE 78

Query: 563 ---NPLKTWVSGMSGISFWGSCNGLVLITSSENN-CLWNPATQKHKMLPTALFE------ 414
              NPLK   S        GSCNGL+ + +S+ +  L+NP+T++ KM+P +  E      
Sbjct: 79  LKNNPLK---SDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVSPLELPNDLD 135

Query: 413 ---EKPVMNIYGFGYNATLQDYEVVNI----GSLSNCF---EVGVYSVKRNSWRRIQDFP 264
                 + N YGFG++   +DY+VV      G   + F   EV VYS+K NSW+RI D+P
Sbjct: 136 DSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYP 195

Query: 263 YGIPF-----------RWEGAFTNGAVHW---VAQRSRKNGLSLNSAIIAYDVGGESFRE 126
           Y + F           R  G F N AVHW   V  + ++NG  L   I+A+D+G E F+ 
Sbjct: 196 YDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDL---IVAFDLGAEEFKI 252

Query: 125 LAYPDNTFDSSCRLRVAILDGNLCLVSSGEA-SFELWVMKEY 3
           +  PD +  +   + V +L G LC+  +      E+WVMKEY
Sbjct: 253 IPQPDYS-SNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEY 293


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  139 bits (351), Expect = 5e-31
 Identities = 90/262 (34%), Positives = 145/262 (55%), Gaps = 17/262 (6%)
 Frame = -3

Query: 737 RCVSKAWYALLDDPAFVDRHFNNQSMERNCLNKSAIFLDPLNSIYSLDFETL-NSRVIDN 561
           RCVSK W  L+D P F+  H N+ S+E  C N S I     + +YSL F+ L N + +D+
Sbjct: 25  RCVSKRWRTLIDSPTFIYLHLNH-SIESPC-NLSIILKS--SELYSLSFDLLDNIQPLDH 80

Query: 560 PLKTWVSGMSGISFWGSCNGLVLITSSENN-CLWNPATQKHKMLPTALFEEKPV------ 402
           PL  +     G+   GSCNGL+ I +  ++  LWNP+ + H+++P    E K        
Sbjct: 81  PLMCY---NHGVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSC 137

Query: 401 -MNIYGFGYNATLQDYEVVNIGSLSNC------FEVGVYSVKRNSWRRIQDFPYGIPFRW 243
            ++++GFGY+ +  DY++V I             EV V+S+++NSWRRI D PY + +  
Sbjct: 138 RVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPG 197

Query: 242 E-GAFTNGAVHWVAQRSRKNGLSLNSAIIAYDVGGESFRELAYPDNTFDSSCRLRVAILD 66
           E G + NGA+HW+   S+    ++   I+A D+G E +  +  P+   D +C + V +L 
Sbjct: 198 ENGIYANGALHWLV--SQDPDSTVADTIVALDLGVEDYHVVPKPE-FVDMNCNMGVGVLQ 254

Query: 65  GNLCLVSSGEAS-FELWVMKEY 3
           G L L++   +   ++WVM+EY
Sbjct: 255 GCLSLLAYARSERVDVWVMEEY 276


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  135 bits (340), Expect = 9e-30
 Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 36/283 (12%)
 Frame = -3

Query: 743 RFRCVSKAWYALLDDPAFVDRHFNNQSMERNCLNKSAIFLDPLNSIYSLDFETLNS---- 576
           RFRC+SK   +L+D P F+D H ++    R+  N   I  D   ++Y+LDF++L+S    
Sbjct: 23  RFRCLSKPLCSLIDSPDFIDHHLSHSLKTRS--NLFLILRD--WNLYTLDFDSLSSVSPA 78

Query: 575 --RVIDNPLKTWVSGMSGISFWGSCNGLVLITSSENN-CLWNPATQKHKMLPTALFE--- 414
              V+ +PL+       G    GSCNGL+ + +SE +  L+NPAT+K+K +P +  E   
Sbjct: 79  AADVLIHPLQKG----GGTEAVGSCNGLLALRNSERDLALYNPATRKYKRVPVSEIEPPD 134

Query: 413 --EKPVMNIYGFGYNATLQDYEVVN----IGSLSNC------FEVGVYSVKRNSWRRIQD 270
              K     YGFG+++  +DY ++     +G    C      ++V VYS+K +SW+RI+ 
Sbjct: 135 RNSKTGYVFYGFGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIKG 194

Query: 269 FPYGIPF-----------RWEGAFTNGAVHWVAQRSRKNGLSLNSAIIAYDVGGESFREL 123
            PY + F           R  G F   A+HWV     +  L +N++IIA+D+  E+F+++
Sbjct: 195 LPYYLRFLYKPFFQVLHRRGYGVFACNALHWVMPHWPE--LGVNNSIIAFDIVNETFQQV 252

Query: 122 AYPDNTFDSSCRLRV--AILDGNLC-LVSSGEASFELWVMKEY 3
             P N  D+    +V   +L+G LC + + G    +LWVM+EY
Sbjct: 253 PQP-NWSDNQLNFQVDAGVLEGRLCAMCNCGHECIDLWVMEEY 294


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  129 bits (324), Expect = 6e-28
 Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 24/269 (8%)
 Frame = -3

Query: 737 RCVSKAWYALLDDPAFVDRHFNNQSMERNCLNKSAIFLDPLNSIYSLDFE---TLNSRV- 570
           R VSK W AL+D P FV  H  + SM+ +  +   I L   + ++ +DFE    LN  V 
Sbjct: 25  RSVSKPWCALIDGPNFVKLHLKH-SMDTS--SNLYIILRTTSHVHYMDFEQNLVLNDCVT 81

Query: 569 ---IDNPLKTWVSGMSGISFWGSCNGLVLITSSENN-CLWNPATQKHKMLPTALFEEKPV 402
              +++PL  +     GI   GS NGL+ I++  ++  +WNP+T+KH+++P    E K  
Sbjct: 82  LKELNHPLMCY---NHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRY 138

Query: 401 MN-------IYGFGYNATLQDYEVVNI------GSLSNCFEVGVYSVKRNSWRRIQDFPY 261
                    ++GFGY++   DY++V I      G  S   EV VYS+++ SWRRI D PY
Sbjct: 139 FGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPY 198

Query: 260 GIPFRW-EGAFTNGAVHWVAQRSRKNGLSLNSAIIAYDVGGESFRELAYPDNTFDSSCRL 84
            + +    G F NGA+HWV   + ++ ++  + ++A D+G E +RE+  P+   D +  +
Sbjct: 199 CVHYPGANGVFANGALHWVVGENPESNVA--NIVVALDLGVEDYREVLQPEYK-DKNFYI 255

Query: 83  RVAILDGNLCLVSS--GEASFELWVMKEY 3
            + +L G LC +++  GE   ++W+MKEY
Sbjct: 256 DLGVLRGCLCFLANFLGE-RVDVWMMKEY 283


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  122 bits (305), Expect = 1e-25
 Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
 Frame = -3

Query: 743 RFRCVSKAWYALLDDPAFVDRHFNNQSMERNCLNKSAIFL--DPLNSIYSLDFETLNSRV 570
           RF+CVSK W +L+  P FV  H      + N  N   IFL  DP  SI    +   +  +
Sbjct: 27  RFKCVSKTWRSLISHPEFVKNHLKRTKEDTNA-NHYKIFLSTDPHLSIDPEAYFDADDNL 85

Query: 569 IDNPLKTWVS--GMSGISFWGSCNGLV--LITSSENNCLWNPATQKHKMLPTALFEEKPV 402
           +   LK  VS    S I   GSCNGLV  LI  +    +WNP+T++ + L      E   
Sbjct: 86  LTTQLKFPVSYPEYSYIEILGSCNGLVCGLIHDNPLIYIWNPSTRESRELAIPGSSEDDA 145

Query: 401 MNIYGFGYNATLQDYEVVNI----------GSLSNCFEVGVYSVKRNSWRRIQDFPYGIP 252
              YGFGY+  L DY++V +          GS S   +V V+++K N WR IQD    + 
Sbjct: 146 F--YGFGYDVKLDDYKIVRVSISTSTNSTDGSNSET-KVEVFTLKSNIWRTIQDLRCSVL 202

Query: 251 FRWEGAFTNGAVHWVAQRSRKNGLSLNSAIIAYDVGGESFRELAYPDNTF--DSSCRLRV 78
               G   NGA+HW+ +  ++NG S    ++++D+  E F E+         DSS  L +
Sbjct: 203 LEGPGTLANGALHWLVR--QENGGSKKCVMVSFDLSEEKFLEMVPLRGLTEDDSSWDLEL 260

Query: 77  AILDGNLCLVSSGEASFELWVMKEY 3
            +L   LCL S      E W+MKEY
Sbjct: 261 KVLGDWLCLYSHYGLICEAWIMKEY 285