BLASTX nr result

ID: Coptis25_contig00010071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010071
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ22954.1| hypothetical protein OsJ_06643 [Oryza sativa Japo...    89   8e-18
dbj|BAD19815.1| hypothetical protein [Oryza sativa Japonica Grou...    89   8e-18
gb|EAY85767.1| hypothetical protein OsI_07127 [Oryza sativa Indi...    89   1e-17
ref|XP_001764898.1| predicted protein [Physcomitrella patens sub...    79   1e-13

>gb|EAZ22954.1| hypothetical protein OsJ_06643 [Oryza sativa Japonica Group]
          Length = 374

 Score = 89.0 bits (219), Expect(2) = 8e-18
 Identities = 46/98 (46%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = +3

Query: 126 QFVEIVVESSADATRLKLALYNGTTGKVYRTLSLADKSVFHV--THVGSSFLIYTAFVQL 299
           +FVE+ V +S DA  L L LYNG  G++Y +L+L DK  F V  +   SS+LIYTAF+ L
Sbjct: 226 EFVELAVRTSLDAKDLTLILYNGANGRMYNSLNLDDKDGFSVAESSSSSSYLIYTAFITL 285

Query: 300 QNGPSNGVALVSDKDDGHVQVIQFISYQGVVKVISEPA 413
           QNGP++G+ALV  K+    +V+ F+SY+G ++ +  PA
Sbjct: 286 QNGPADGIALVY-KNGNRKEVLDFLSYEGSMRALDGPA 322



 Score = 27.3 bits (59), Expect(2) = 8e-18
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 493 RFGKFIWRKFRNEASP*KPNMGQ 561
           + G F WRK    A+P K N+GQ
Sbjct: 350 KIGDFAWRKLEGYATPGKLNVGQ 372


>dbj|BAD19815.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|47497575|dbj|BAD19646.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 230

 Score = 89.0 bits (219), Expect(2) = 8e-18
 Identities = 46/98 (46%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = +3

Query: 126 QFVEIVVESSADATRLKLALYNGTTGKVYRTLSLADKSVFHV--THVGSSFLIYTAFVQL 299
           +FVE+ V +S DA  L L LYNG  G++Y +L+L DK  F V  +   SS+LIYTAF+ L
Sbjct: 82  EFVELAVRTSLDAKDLTLILYNGANGRMYNSLNLDDKDGFSVAESSSSSSYLIYTAFITL 141

Query: 300 QNGPSNGVALVSDKDDGHVQVIQFISYQGVVKVISEPA 413
           QNGP++G+ALV  K+    +V+ F+SY+G ++ +  PA
Sbjct: 142 QNGPADGIALVY-KNGNRKEVLDFLSYEGSMRALDGPA 178



 Score = 27.3 bits (59), Expect(2) = 8e-18
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 493 RFGKFIWRKFRNEASP*KPNMGQ 561
           + G F WRK    A+P K N+GQ
Sbjct: 206 KIGDFAWRKLEGYATPGKLNVGQ 228


>gb|EAY85767.1| hypothetical protein OsI_07127 [Oryza sativa Indica Group]
          Length = 488

 Score = 88.6 bits (218), Expect(2) = 1e-17
 Identities = 46/98 (46%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = +3

Query: 126 QFVEIVVESSADATRLKLALYNGTTGKVYRTLSLADKSVFHV--THVGSSFLIYTAFVQL 299
           +FVE+ V +S DA  L L LYNG  G++Y +L+L DK  F V  +   SS+LIYTAF+ L
Sbjct: 340 EFVELAVRTSLDAKDLTLILYNGANGQMYNSLNLDDKDGFSVAESSSSSSYLIYTAFITL 399

Query: 300 QNGPSNGVALVSDKDDGHVQVIQFISYQGVVKVISEPA 413
           QNGP++G+ALV  K+    +V+ F+SY+G ++ +  PA
Sbjct: 400 QNGPADGIALVY-KNGNRKEVLDFLSYEGSMRALDGPA 436



 Score = 27.3 bits (59), Expect(2) = 1e-17
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 493 RFGKFIWRKFRNEASP*KPNMGQ 561
           + G F WRK    A+P K N+GQ
Sbjct: 464 KIGDFAWRKLEGYATPGKLNVGQ 486


>ref|XP_001764898.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683934|gb|EDQ70340.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 248

 Score = 79.3 bits (194), Expect(2) = 1e-13
 Identities = 43/105 (40%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
 Frame = +3

Query: 126 QFVEIVVESSADATRLKLALYNGTTGKVYRTLSLADKSVFHVTHV-GSSFLIYTAFV--- 293
           +F+E++V  + + + LK+ LY+ + GKVYR L LAD ++F  ++V GSS LIY+      
Sbjct: 95  EFIEVIVGPNTEISSLKIYLYS-SDGKVYRNLPLADAALFQASNVNGSSSLIYSTARPGR 153

Query: 294 QLQNGPSNGVALVSDKDDGHVQVIQFISYQGVVKVISEPATETKS 428
            +QNGP++G+ALV ++ +   +VIQF+SY+GV+     PA  + S
Sbjct: 154 SIQNGPADGIALVQERSENKSKVIQFLSYEGVLTAAEGPAKGSTS 198



 Score = 23.1 bits (48), Expect(2) = 1e-13
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 493 RFGKFIWRKFRNEASP*KPNMGQ 561
           R+  F W KF   A+P   N GQ
Sbjct: 223 RYEDFKWTKFSKAATPGSLNSGQ 245


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