BLASTX nr result

ID: Coptis25_contig00010061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010061
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29047.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_002272283.1| PREDICTED: uncharacterized protein LOC100247...   362   1e-97
emb|CAN73797.1| hypothetical protein VITISV_018825 [Vitis vinifera]   359   8e-97
ref|XP_002310648.1| predicted protein [Populus trichocarpa] gi|2...   351   2e-94
ref|XP_003556599.1| PREDICTED: uncharacterized protein LOC100785...   334   2e-89

>emb|CBI29047.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  362 bits (929), Expect = 1e-97
 Identities = 196/324 (60%), Positives = 232/324 (71%), Gaps = 38/324 (11%)
 Frame = +2

Query: 170  PSNSYPSRRTKTRGRGFHLHH----------KSVKCKASTSSFS-----VTDFDLYDLLG 304
            P++S  +R +  R  G   HH           S+ CKAS+SS S     + DFDLYDLLG
Sbjct: 11   PTSSIITRISTPRSAGLTFHHATTLRKLHGNNSITCKASSSSSSSSLSSLVDFDLYDLLG 70

Query: 305  IDSSSDQSQIKKAYRSLQKRCHPDISGPTGHEMAIILNDVYSILSDPISRSAYDKEQAKM 484
            I+SSSDQ QIK AYR LQKRCHPDI+GP GH+MAIILN+VYS+LSDP  R AYDKEQAK+
Sbjct: 71   IESSSDQWQIKMAYRKLQKRCHPDIAGPAGHDMAIILNEVYSVLSDPNLRLAYDKEQAKI 130

Query: 485  AEFRGYSGKPIYSTWYGSESEERAVFVDEVKCVGCLKCALLAQKTFAIESVYGRARVVAQ 664
            A  RGY+GKP+YS WYGSESEERAVFVDEVKCVGCLKCAL A+KTFAIESVYGRARVVAQ
Sbjct: 131  ARLRGYTGKPLYSVWYGSESEERAVFVDEVKCVGCLKCALFAEKTFAIESVYGRARVVAQ 190

Query: 665  WADPENKIQDAIQACPVDCISMVERANLAALEYLMSKQPR----------VG---TKGMV 805
            WADPE KIQ AI ACPVDCISMVER+NLAALE+LMSKQPR          VG   +   V
Sbjct: 191  WADPEYKIQQAIDACPVDCISMVERSNLAALEFLMSKQPRGSVRMSAGNAVGACVSNIFV 250

Query: 806  DIKKFQSKLNLTRLEVSTQDTRE---------FAFHTIRSISNWFYWQSPK-GAEHGGNL 955
            D+KKFQ++ +    + ST  ++E          A  TIRSI+NW YWQ+P  G++ G +L
Sbjct: 251  DVKKFQTRFHDAMDKASTHGSKEKDDQREARISAIQTIRSITNWLYWQAPTGGSDSGQSL 310

Query: 956  INIAGKRTQYDTNKLRDAATAARQ 1027
              +AG+ +  + NKLRDAA A +Q
Sbjct: 311  TRVAGRLSGPNFNKLRDAAAARKQ 334


>ref|XP_002272283.1| PREDICTED: uncharacterized protein LOC100247733 [Vitis vinifera]
          Length = 482

 Score =  362 bits (929), Expect = 1e-97
 Identities = 196/324 (60%), Positives = 232/324 (71%), Gaps = 38/324 (11%)
 Frame = +2

Query: 170  PSNSYPSRRTKTRGRGFHLHH----------KSVKCKASTSSFS-----VTDFDLYDLLG 304
            P++S  +R +  R  G   HH           S+ CKAS+SS S     + DFDLYDLLG
Sbjct: 11   PTSSIITRISTPRSAGLTFHHATTLRKLHGNNSITCKASSSSSSSSLSSLVDFDLYDLLG 70

Query: 305  IDSSSDQSQIKKAYRSLQKRCHPDISGPTGHEMAIILNDVYSILSDPISRSAYDKEQAKM 484
            I+SSSDQ QIK AYR LQKRCHPDI+GP GH+MAIILN+VYS+LSDP  R AYDKEQAK+
Sbjct: 71   IESSSDQWQIKMAYRKLQKRCHPDIAGPAGHDMAIILNEVYSVLSDPNLRLAYDKEQAKI 130

Query: 485  AEFRGYSGKPIYSTWYGSESEERAVFVDEVKCVGCLKCALLAQKTFAIESVYGRARVVAQ 664
            A  RGY+GKP+YS WYGSESEERAVFVDEVKCVGCLKCAL A+KTFAIESVYGRARVVAQ
Sbjct: 131  ARLRGYTGKPLYSVWYGSESEERAVFVDEVKCVGCLKCALFAEKTFAIESVYGRARVVAQ 190

Query: 665  WADPENKIQDAIQACPVDCISMVERANLAALEYLMSKQPR----------VG---TKGMV 805
            WADPE KIQ AI ACPVDCISMVER+NLAALE+LMSKQPR          VG   +   V
Sbjct: 191  WADPEYKIQQAIDACPVDCISMVERSNLAALEFLMSKQPRGSVRMSAGNAVGACVSNIFV 250

Query: 806  DIKKFQSKLNLTRLEVSTQDTRE---------FAFHTIRSISNWFYWQSPK-GAEHGGNL 955
            D+KKFQ++ +    + ST  ++E          A  TIRSI+NW YWQ+P  G++ G +L
Sbjct: 251  DVKKFQTRFHDAMDKASTHGSKEKDDQREARISAIQTIRSITNWLYWQAPTGGSDSGQSL 310

Query: 956  INIAGKRTQYDTNKLRDAATAARQ 1027
              +AG+ +  + NKLRDAA A +Q
Sbjct: 311  TRVAGRLSGPNFNKLRDAAAARKQ 334


>emb|CAN73797.1| hypothetical protein VITISV_018825 [Vitis vinifera]
          Length = 434

 Score =  359 bits (921), Expect = 8e-97
 Identities = 195/324 (60%), Positives = 231/324 (71%), Gaps = 38/324 (11%)
 Frame = +2

Query: 170  PSNSYPSRRTKTRGRGFHLHH----------KSVKCKASTSSFS-----VTDFDLYDLLG 304
            P++S  +R +  R  G   HH           S+ CKAS+SS S     + DFDLYDLLG
Sbjct: 11   PTSSIITRTSTPRSAGLTFHHATTLRKLHGNNSITCKASSSSSSSSLSSLVDFDLYDLLG 70

Query: 305  IDSSSDQSQIKKAYRSLQKRCHPDISGPTGHEMAIILNDVYSILSDPISRSAYDKEQAKM 484
            I+SSSDQ QIK AYR LQKRCHPDI+GP GH+MAIILN+VYS+LSDP  R AYDKEQAK+
Sbjct: 71   IESSSDQWQIKMAYRKLQKRCHPDIAGPAGHDMAIILNEVYSVLSDPNLRLAYDKEQAKI 130

Query: 485  AEFRGYSGKPIYSTWYGSESEERAVFVDEVKCVGCLKCALLAQKTFAIESVYGRARVVAQ 664
            A  RGY+GKP+YS WYGSESEERAVFVDEVKCVGCLKCAL A+KTFAIESVYGRARVVAQ
Sbjct: 131  AGLRGYTGKPLYSVWYGSESEERAVFVDEVKCVGCLKCALFAEKTFAIESVYGRARVVAQ 190

Query: 665  WADPENKIQDAIQACPVDCISMVERANLAALEYLMSKQPR----------VG---TKGMV 805
            WADPE KIQ AI ACPVDCISMVER+NLAALE+LMSKQPR          VG   +   V
Sbjct: 191  WADPEYKIQQAIDACPVDCISMVERSNLAALEFLMSKQPRGSVRMSAGNAVGACVSNIFV 250

Query: 806  DIKKFQSKLNLTRLEVSTQDTRE---------FAFHTIRSISNWFYWQSPK-GAEHGGNL 955
            D+KKFQ++ +    + ST  ++E          A  TIRSI+NW YWQ+P  G++   +L
Sbjct: 251  DVKKFQTRFHDAMDKASTHGSKEKDDQREARISAIQTIRSITNWLYWQAPTGGSDSCQSL 310

Query: 956  INIAGKRTQYDTNKLRDAATAARQ 1027
              +AG+ +  + NKLRDAA A +Q
Sbjct: 311  TRVAGRLSGPNINKLRDAAAARKQ 334


>ref|XP_002310648.1| predicted protein [Populus trichocarpa] gi|222853551|gb|EEE91098.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  351 bits (900), Expect = 2e-94
 Identities = 189/296 (63%), Positives = 221/296 (74%), Gaps = 32/296 (10%)
 Frame = +2

Query: 236  SVKCKASTSSFS------VTDFDLYDLLGIDSSSDQSQIKKAYRSLQKRCHPDISGPTGH 397
            S+ C+A++SS S      +TDFDLYDLLGIDSSSD SQIK AYR+LQKRCHPDI+GP GH
Sbjct: 26   SLTCRATSSSSSSSSYSSITDFDLYDLLGIDSSSDHSQIKTAYRTLQKRCHPDIAGPAGH 85

Query: 398  EMAIILNDVYSILSDPISRSAYDKEQAKMAEFRGYSGKPIYSTWYGSESEERAVFVDEVK 577
            +MAIILN+ YS+LSDP SR AYDKEQAKMAE RGYSGKPIYS W+GSESE+RAVFVDEVK
Sbjct: 86   DMAIILNEAYSLLSDPNSRLAYDKEQAKMAELRGYSGKPIYSVWFGSESEQRAVFVDEVK 145

Query: 578  CVGCLKCALLAQKTFAIESVYGRARVVAQWADPENKIQDAIQACPVDCISMVERANLAAL 757
            CVGCLKCAL+A+KTFAIES+YGRARVVAQWADPE+KIQ AI ACPVDCIS VER++LAAL
Sbjct: 146  CVGCLKCALIAEKTFAIESLYGRARVVAQWADPEHKIQAAIDACPVDCISTVERSDLAAL 205

Query: 758  EYLMSKQP----RVG---TKG------MVDIKKFQSKLNLTRLEVSTQDTRE-------- 874
            E+LMSKQP    RVG   T G       +D+KKFQ++      + + Q++ E        
Sbjct: 206  EFLMSKQPRGSVRVGGGNTAGGRVSNIFIDVKKFQNRFVDAMNKANPQNSMESDLQREAR 265

Query: 875  -FAFHTIRSISNWFYWQSPKG----AEHGGNLINIAGKRTQYDTNKLRDAATAARQ 1027
              AF  IRSISNW YWQSPKG     E    L  I  K  Q + NK+R+AA A ++
Sbjct: 266  ISAFQAIRSISNWLYWQSPKGRADSPESCQKLARIVRKSPQPNINKIREAAAARKK 321


>ref|XP_003556599.1| PREDICTED: uncharacterized protein LOC100785995 [Glycine max]
          Length = 490

 Score =  334 bits (857), Expect = 2e-89
 Identities = 181/320 (56%), Positives = 226/320 (70%), Gaps = 25/320 (7%)
 Frame = +2

Query: 125  PSGVLVHPLSASSLRPSNSYPSRRTKTRGRGFHLHHKSVKCKASTSSFSVTDFDLYDLLG 304
            PS ++  PL      PSN +    +K+          ++ CKAS+SS ++ DFDLYDLLG
Sbjct: 31   PSYIIKKPLG---FHPSNLHNKCFSKSNAST-----STLTCKASSSSSTMMDFDLYDLLG 82

Query: 305  IDSSSDQSQIKKAYRSLQKRCHPDISGPTGHEMAIILNDVYSILSDPISRSAYDKEQAKM 484
            IDSS DQSQ+K AYRSLQKRCHPDI+GP GH+MAIILN+ YSILSDP +R AYDKEQAK 
Sbjct: 83   IDSSCDQSQVKVAYRSLQKRCHPDIAGPAGHDMAIILNEAYSILSDPNARLAYDKEQAKS 142

Query: 485  AEFRGYSGKPIYSTWYGSESEERAVFVDEVKCVGCLKCALLAQKTFAIESVYGRARVVAQ 664
            +EF+G++G+PIYS W GSESE+RA+FVDE+KCVGCLKCALLA+KTFA+ESVYGRARVV+Q
Sbjct: 143  SEFKGFTGRPIYSVWCGSESEQRAIFVDEIKCVGCLKCALLAEKTFAVESVYGRARVVSQ 202

Query: 665  WADPENKIQDAIQACPVDCISMVERANLAALEYLMSKQP----RVG---TKG------MV 805
            WAD  NKI +AI++CPV+CIS+VER+NLAALE+LMSKQP    RVG   T G       V
Sbjct: 203  WADSPNKIDEAIESCPVNCISVVERSNLAALEFLMSKQPRGNVRVGAAHTAGARVSNIFV 262

Query: 806  DIKKFQS-------KLNLTRLEVSTQ-DTREFAFHTIRSISNWFYWQSPKGAEHGG---- 949
            D++KFQ+       K N    E   Q ++R  A   IRSISNW YWQ+P+ +        
Sbjct: 263  DVEKFQTRFQEAMEKANKCSKETDLQRESRMSAIQAIRSISNWLYWQTPRSSSSSSKSEK 322

Query: 950  NLINIAGKRTQYDTNKLRDA 1009
             +  +  K  + D +KLRDA
Sbjct: 323  GMTRVVYKLPEPDISKLRDA 342


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