BLASTX nr result

ID: Coptis25_contig00010045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010045
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein...   506   e-141
emb|CBI36054.3| unnamed protein product [Vitis vinifera]              502   e-140
ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein...   502   e-140
ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139
ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp....   498   e-138

>ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein At3g21360-like [Cucumis
            sativus]
          Length = 324

 Score =  506 bits (1302), Expect = e-141
 Identities = 241/328 (73%), Positives = 284/328 (86%)
 Frame = +3

Query: 63   MSVENLGFTELIKLTYQKNYNGNNFPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSS 242
            M+VENL     I++ +QK+Y  + FP +++P +++ F +S+F + I  QK  ++SL+ +S
Sbjct: 1    MAVENL---MEIQIPHQKHYPASYFPLVLSPSSAS-FAVSSFAQAIKAQKSTIDSLILNS 56

Query: 243  GALLLRGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHH 422
            GA+L RGFPV+ ASDFN VVEAFGYEE PYVGGAAPR+ V+GRVFTANESPPDQ IPFHH
Sbjct: 57   GAILFRGFPVEAASDFNDVVEAFGYEEFPYVGGAAPRSKVVGRVFTANESPPDQKIPFHH 116

Query: 423  EMAQVPEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVL 602
            E+AQVPEFP+KLFF+CE EPR+GGETPIVLSHV+YER+KE+YP+FVE+LE  GLIYTRVL
Sbjct: 117  ELAQVPEFPAKLFFYCEVEPRSGGETPIVLSHVVYERVKEKYPEFVERLEEQGLIYTRVL 176

Query: 603  GAGDDPSSPIGCGWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKR 782
            G  DDPSSPIG GW STFLT +K+IAEERAA+LGMKLEW KDGVKT+MGPIPA+K+DK R
Sbjct: 177  GEDDDPSSPIGRGWKSTFLTHDKSIAEERAAKLGMKLEWLKDGVKTVMGPIPAIKHDKVR 236

Query: 783  GRKVWFNSMVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGD 962
             RK+WFNSMVAAY GW+D RNDPVKAVTFGDGTPLPADIIY CL +L+EE VAIPWQKGD
Sbjct: 237  QRKIWFNSMVAAYTGWEDARNDPVKAVTFGDGTPLPADIIYGCLRILEEESVAIPWQKGD 296

Query: 963  ILLIDNWAALHSRRPFEPPRRILASLCK 1046
            ILLIDNWA LHSRRPF PPRRILASLC+
Sbjct: 297  ILLIDNWAVLHSRRPFLPPRRILASLCR 324


>emb|CBI36054.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  502 bits (1292), Expect = e-140
 Identities = 234/316 (74%), Positives = 272/316 (86%), Gaps = 1/316 (0%)
 Frame = +3

Query: 102  LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 278
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 40   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 99

Query: 279  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEFPSKL 458
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPDQ IPFHHEMAQVPEFPSKL
Sbjct: 100  ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 159

Query: 459  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGC 638
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIG 
Sbjct: 160  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 219

Query: 639  GWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNSMVAA 818
            GW STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 220  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 279

Query: 819  YIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWAALHS 998
            Y GW+D RNDPVKAVTFGDG PLPADIIY CL++L+EECVA+PWQKGD+LL+DNWA LHS
Sbjct: 280  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 339

Query: 999  RRPFEPPRRILASLCK 1046
            RRPF+PPRR+LASLCK
Sbjct: 340  RRPFDPPRRVLASLCK 355


>ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein At3g21360 [Vitis
            vinifera]
          Length = 325

 Score =  502 bits (1292), Expect = e-140
 Identities = 234/316 (74%), Positives = 272/316 (86%), Gaps = 1/316 (0%)
 Frame = +3

Query: 102  LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 278
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 10   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 69

Query: 279  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEFPSKL 458
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPDQ IPFHHEMAQVPEFPSKL
Sbjct: 70   ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 129

Query: 459  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGC 638
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIG 
Sbjct: 130  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 189

Query: 639  GWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNSMVAA 818
            GW STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 190  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 249

Query: 819  YIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWAALHS 998
            Y GW+D RNDPVKAVTFGDG PLPADIIY CL++L+EECVA+PWQKGD+LL+DNWA LHS
Sbjct: 250  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 309

Query: 999  RRPFEPPRRILASLCK 1046
            RRPF+PPRR+LASLCK
Sbjct: 310  RRPFDPPRRVLASLCK 325


>ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|222845503|gb|EEE83050.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score =  501 bits (1289), Expect = e-139
 Identities = 237/320 (74%), Positives = 273/320 (85%), Gaps = 3/320 (0%)
 Frame = +3

Query: 96   IKLTYQKNYNGNN---FPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGF 266
            I++ +QK+Y+      FPS+++P   +   LS F ++I  QK +L+SLL  +GA+L RGF
Sbjct: 8    IQIQHQKHYSNIPSFPFPSVLSPNPFSSSTLSFFTDSIIAQKPFLDSLLLKTGAILFRGF 67

Query: 267  PVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEF 446
             V TA DFN VVEAFG+EELPYVGGAAPRTNV+GRVFTANESPPDQ IPFHHEMAQVPEF
Sbjct: 68   DVNTAKDFNDVVEAFGFEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVPEF 127

Query: 447  PSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSS 626
            PSKLFFFCE EP +GGETPIVLSHV+YERMKERYPDFVEK+E HGLIYTRVLG  DDPSS
Sbjct: 128  PSKLFFFCEVEPGSGGETPIVLSHVVYERMKERYPDFVEKIEEHGLIYTRVLGEEDDPSS 187

Query: 627  PIGCGWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNS 806
            PIG GW STFLT +K++AE+RAA+LGM LEW +DGVKTIMGPIPA+KYDK R RK+WFNS
Sbjct: 188  PIGRGWKSTFLTNDKSVAEQRAAKLGMTLEWFEDGVKTIMGPIPAIKYDKSRNRKIWFNS 247

Query: 807  MVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWA 986
            MVAAY GWKD RNDPVKAVTFGDG PLP DII+ CL++L+EE +AIPWQKGD+LLIDNWA
Sbjct: 248  MVAAYTGWKDARNDPVKAVTFGDGQPLPGDIIHDCLKILEEESLAIPWQKGDVLLIDNWA 307

Query: 987  ALHSRRPFEPPRRILASLCK 1046
             LH+RR F PPRR+LASLCK
Sbjct: 308  VLHARRSFNPPRRVLASLCK 327


>ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329141|gb|EFH59560.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  498 bits (1281), Expect = e-138
 Identities = 229/324 (70%), Positives = 275/324 (84%), Gaps = 5/324 (1%)
 Frame = +3

Query: 90   ELIKLTYQKNYNGNNFPSIITPKTSN----RFNLSTFCETITNQKQWLESLLHSSGALLL 257
            E  ++  QK+Y    FP++I+P +S+      +L  F ++I NQK +L+SLLH SG ++ 
Sbjct: 7    EETRIPQQKHYKSKPFPAVISPPSSSIPIPAVSLPLFTQSIKNQKPYLDSLLHESGTVIF 66

Query: 258  RGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQV 437
            RGFPV +A DFN VVEAFG++E PYVGGAAPRT+V+GRVFTANESPPDQ IPFHHEMAQV
Sbjct: 67   RGFPVNSAEDFNDVVEAFGFDEFPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQV 126

Query: 438  PEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDD 617
            PEFPSKLFF+CE EP++GGETPIVLSHV+YERMKE++P+FV++LE HGL+Y RVLG  DD
Sbjct: 127  PEFPSKLFFYCEIEPKSGGETPIVLSHVVYERMKEKHPEFVQRLEEHGLLYVRVLGEDDD 186

Query: 618  PSSPIGCGWHSTFLTKEKNIAEERAARLGMKLEWTKD-GVKTIMGPIPAVKYDKKRGRKV 794
            PSSPIG GW STFLT +KN+AE+RAA LGMKLEWT+D G KT+MGPIPA+KYD+ R RKV
Sbjct: 187  PSSPIGRGWKSTFLTHDKNLAEQRAANLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKV 246

Query: 795  WFNSMVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLI 974
            WFNSMVAAY GW+D RNDP KAVTFGDG PLP DI++ CL +L+EECVA+PWQ+GD+LLI
Sbjct: 247  WFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPEDIVHDCLRILEEECVAVPWQRGDVLLI 306

Query: 975  DNWAALHSRRPFEPPRRILASLCK 1046
            DNWA LHSRRPFEPPRR+LASLCK
Sbjct: 307  DNWAVLHSRRPFEPPRRVLASLCK 330


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