BLASTX nr result

ID: Coptis25_contig00010042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010042
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|2...   105   9e-21
ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|2...   100   7e-19
ref|XP_002528498.1| transcription factor, putative [Ricinus comm...    96   7e-18
ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
emb|CBI28638.3| unnamed protein product [Vitis vinifera]               89   2e-15

>ref|XP_002305235.1| predicted protein [Populus trichocarpa] gi|222848199|gb|EEE85746.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  105 bits (263), Expect = 9e-21
 Identities = 69/151 (45%), Positives = 88/151 (58%), Gaps = 13/151 (8%)
 Frame = -3

Query: 419 MPIEGMFIDPCSSMPAPDLSLHISPPN-SAPSSFCNSNNGNDA----AGFDVWKRGDGTI 255
           MP+EG+FI+P SS P PDLSLHISPPN S+PSS CN  N N +    A F++  R + T 
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNISSPSSLCNKKNNNISNKVDASFNLLGRQEATH 59

Query: 254 KCNSDSSVRSERQAYTELSLANLTSGTTEADSRWIRSLESIRNSEEDQFRRVGGAAARDQ 75
           K N+ SS+RS+ QAY ELSLA+ T+G  E   R  R+L S R  E          +    
Sbjct: 60  KPNTVSSMRSDSQAYIELSLAHPTTGLDEESRRSRRNLSSSRAVELPHLNPYHQQSHNHH 119

Query: 74  YPY--------TQRLNQLNHGVSLLDVSERL 6
             +        T  LN +NHGVSLL+VS+ L
Sbjct: 120 QQHHLHHSNSTTHHLNHINHGVSLLEVSDGL 150


>ref|XP_002302912.1| predicted protein [Populus trichocarpa] gi|222844638|gb|EEE82185.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
 Frame = -3

Query: 419 MPIEGMFIDPCSSMPAPDLSLHISPPN-SAPSSFCNSNNG---NDAAGFDVWKRGDGTIK 252
           MP+EG+FI+P SS P PDLSLHISPPN S+PSS CN+N+       A F++  R +   K
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNISSPSSICNNNSNIRDKIDASFNLLGRQEAIRK 59

Query: 251 CNSDSSVRSERQAYTELSLANLTSGTTEADSRWIRSLESIRNSEEDQFRRVGGAAARDQY 72
            N+  S+RS+ QA  ELSLA+ T+G  E   R  R+L S R  E          +   Q+
Sbjct: 60  SNTAISMRSDSQACIELSLAHPTTGLNEESIRSRRNLSSARVEELPHNNPYRQQSHHHQH 119

Query: 71  PY-----TQRLNQLNHGVSLLDVSERL 6
            +     T  LN +NHGVSLL+VS+ L
Sbjct: 120 LHRSNGNTHHLNHINHGVSLLEVSDGL 146


>ref|XP_002528498.1| transcription factor, putative [Ricinus communis]
           gi|223532058|gb|EEF33867.1| transcription factor,
           putative [Ricinus communis]
          Length = 441

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
 Frame = -3

Query: 419 MPIEGMFIDPCSSMPAPDLSLHISPPNSAPSSFCNSN-----NGNDAAGFDVWKRGDGTI 255
           MP+EG+FI+P SS P PDLSLHISPPN++ SS CN++     +  D  GF++  R +G  
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNTSSSSVCNNSIINNKSTTDTTGFNLLSRQEGIH 59

Query: 254 KCNSDSSVRSERQAYTELSLANLTSGTTEADSRWIR------SLESIRNSEEDQFRRVGG 93
              S +S+R + QAYTELSLA+  +     D   IR      S  + +    + +++   
Sbjct: 60  NLKS-NSMRIDSQAYTELSLAHPATTNVVDDETRIRRNFTASSTATAQEPPHNPYQQQSH 118

Query: 92  AAARDQYPYTQRLNQLNHGVSLLDVSERL 6
                 +  T  LN LNHGVSLLDVS+ L
Sbjct: 119 NHLHQHHHNTHHLNHLNHGVSLLDVSDGL 147


>ref|XP_002329703.1| predicted protein [Populus trichocarpa] gi|222870611|gb|EEF07742.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
 Frame = -3

Query: 419 MPIEGMFIDPCSSMPAPDLSLHISPPNSAPSSFCNSNNGNDAAGFDVWKRGDGTIKCNSD 240
           M  +G+F D  S    PDLSLHIS PNSAPSS C   N  D+A FD+W++ DG IK +SD
Sbjct: 1   MSQKGIF-DKQSLNLIPDLSLHISLPNSAPSSICTGTNDGDSA-FDIWRKDDGLIKSHSD 58

Query: 239 SSVRSERQ-AYTELSLANLTS-GTTEADSRWI-----RSLESIRNSEEDQFRRVGGAAAR 81
           SS+R   Q + TELSLAN TS    EA+S W      R    + +   DQ R+      R
Sbjct: 59  SSIRVGSQISDTELSLANPTSTAALEAESPWRINYGGRGTGGLEDHHPDQARQRNLLLQR 118

Query: 80  DQYPYTQRLNQLNHGVSLLDVS 15
                  +++ +NHG+S+LDV+
Sbjct: 119 SS---NGQMSHINHGISVLDVT 137


>emb|CBI28638.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
 Frame = -3

Query: 419 MPIEGMFIDPCSSMPAPDLSLHISPPN--SAPSSFCNSNNGNDAAGFDVWKRGDGTIKCN 246
           MP+EG+FI+P SS P PDLSLHISPPN  S+P+S CN ++    +  ++  +    +K +
Sbjct: 1   MPLEGVFIEP-SSNPVPDLSLHISPPNNTSSPTSICNISSNEGGSNTNLLGQCQ-ALKSD 58

Query: 245 SDSSVRSERQAYTELSLANLTSGTTEADSRWIRSLESIRNSEEDQFRRVGGAAARDQYPY 66
           S++SVRS  QAYTELSLA+  +   + D R  R+     + E+              +  
Sbjct: 59  SNTSVRSNLQAYTELSLAH-AANVMDEDGRCSRNFTVGADQEQLHNPYHQNRHHHLSHHP 117

Query: 65  TQRLNQLNHGVSLLDVSERL 6
              LN +NHGVSLLDVS+ L
Sbjct: 118 NNNLNHINHGVSLLDVSDVL 137


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