BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010034
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   110   1e-25
ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|2...   111   6e-25
ref|XP_002316839.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-20
ref|XP_003635769.1| RING finger-like protein [Medicago truncatul...    98   2e-20
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   102   4e-20

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  110 bits (274), Expect(2) = 1e-25
 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +3

Query: 12  TNEQPRRGLDAAVIATLPLFVYKGAE-EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFH 188
           T+E P+ GLD  VIA+LP+FVYK +  + +D   ECAVCLS L+D+EMAR LPNCKHTFH
Sbjct: 92  TSEPPKTGLDPVVIASLPIFVYKQSNGDQEDNDQECAVCLSVLQDQEMARSLPNCKHTFH 151

Query: 189 SQCIDTWLRVHSTCPIC 239
           ++CID WL  HSTCPIC
Sbjct: 152 AECIDKWLTSHSTCPIC 168



 Score = 32.0 bits (71), Expect(2) = 1e-25
 Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
 Frame = +2

Query: 293 HSTCPICHTEAD--------RAKSPA*VY*VGCGCSSHGYRSTSRC-NQPYFTMFRGYIR 445
           HSTCPIC TEA+            PA            G   TS   NQ       G I 
Sbjct: 162 HSTCPICRTEAEPRIQPEPREGPVPAGGAATAPPLEQVGTEGTSESGNQSSSNKASGSIS 221

Query: 446 RCTRTIFKTRRIKFATKFF*LSREKSDRRLRPNEQTDCARDLE 574
           R    +   RRI        LSRE+S RR++   Q     DLE
Sbjct: 222 R----LSSFRRI--------LSRERSSRRIQSETQEQGLEDLE 252


>ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|222862459|gb|EEE99965.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score =  111 bits (277), Expect(2) = 6e-25
 Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 24  PRRGLDAAVIATLPLFVYKGAE-EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFHSQCI 200
           P+RGLD  VIA+LP+FVY+  E + +D  IECAVCLS LED+EMAR+LPNCKH FH++CI
Sbjct: 1   PKRGLDPTVIASLPIFVYQQTEGQAEDDLIECAVCLSMLEDQEMARILPNCKHKFHAECI 60

Query: 201 DTWLRVHSTCPIC 239
           D WL  HSTCPIC
Sbjct: 61  DKWLSSHSTCPIC 73



 Score = 28.5 bits (62), Expect(2) = 6e-25
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 293 HSTCPICHTEAD 328
           HSTCPIC TEA+
Sbjct: 67  HSTCPICRTEAE 78


>ref|XP_002316839.1| predicted protein [Populus trichocarpa] gi|222859904|gb|EEE97451.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 95.5 bits (236), Expect(2) = 2e-20
 Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
 Frame = +3

Query: 18  EQPRRGLDAAVIATLPLFVYKGAEEIKDRH-IECAVCLSNLEDEEMARLLPNCKHTFHSQ 194
           E P+RGLD  VI++LPLF YK A++      +EC++CL  + + +  R+LPNCKHTFH +
Sbjct: 70  EPPKRGLDPLVISSLPLFTYKLADQTDHGEPVECSICLGTIVEGDTVRVLPNCKHTFHVE 129

Query: 195 CIDTWLRVHSTCPIC 239
           CID WL  HSTCPIC
Sbjct: 130 CIDMWLGSHSTCPIC 144



 Score = 29.3 bits (64), Expect(2) = 2e-20
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 293 HSTCPICHTEADRAKSPA 346
           HSTCPIC T+A+    PA
Sbjct: 138 HSTCPICRTDAEPMIQPA 155


>ref|XP_003635769.1| RING finger-like protein [Medicago truncatula]
           gi|355501704|gb|AES82907.1| RING finger-like protein
           [Medicago truncatula]
          Length = 127

 Score = 98.2 bits (243), Expect(2) = 2e-20
 Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
 Frame = +3

Query: 3   HVHTNEQPRRGLDAAVIATLPLFVYKGAEE-----IKDRHIECAVCLSNLEDEEMARLLP 167
           H    E P   LD  +I TLP F++K  ++     + +  +ECAVCLS L+DEEM RLLP
Sbjct: 29  HTQLTEPPNTCLDPKLITTLPTFLFKQKQQEESNNVSNNIVECAVCLSLLQDEEMMRLLP 88

Query: 168 NCKHTFHSQCIDTWLRVHSTCPIC 239
           NCKH+FH  CID WL  HSTCPIC
Sbjct: 89  NCKHSFHVGCIDKWLASHSTCPIC 112



 Score = 26.2 bits (56), Expect(2) = 2e-20
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 293 HSTCPICHTEADRAKSP 343
           HSTCPIC T+ +    P
Sbjct: 106 HSTCPICRTKVEPRLEP 122


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  102 bits (255), Expect = 4e-20
 Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
 Frame = +3

Query: 6   VHTNEQPRRGLDAAVIATLPLFVYKGAEEIKDRHI-ECAVCLSNLEDEEMARLLPNCKHT 182
           VH++E P+ GLD +VI +LP+F +   +  ++    +CAVCLS LE+ E+ARLLPNCKHT
Sbjct: 76  VHSDEPPKTGLDQSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLPNCKHT 135

Query: 183 FHSQCIDTWLRVHSTCPICXXXXXXXXXXXXXXXXXXTPRAPFVTLKQIEPRAQPEFIEL 362
           FH++CID WL  HSTCPIC                   PR   V ++ + P   P     
Sbjct: 136 FHAECIDKWLGTHSTCPIC--------RTEAEPRLQPEPREAMVMIRTVPPAPAP----- 182

Query: 363 XXXXXXXXXXXXXDAIN-PTLPCSEGTSD 446
                        D  N  +L CSEGTS+
Sbjct: 183 -----------PSDGTNSSSLACSEGTSE 200