BLASTX nr result
ID: Coptis25_contig00010033
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010033 (1065 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2... 68 3e-09 ref|XP_003597899.1| EPIDERMAL PATTERNING FACTOR-like protein [Me... 68 4e-09 ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c... 66 1e-08 ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Me... 65 4e-08 ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Me... 65 4e-08 >ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1| predicted protein [Populus trichocarpa] Length = 109 Score = 68.2 bits (165), Expect = 3e-09 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 7/88 (7%) Frame = -1 Query: 366 SFSFIPLKSVSSYLPNYAE---RQRKHVVGSKPPLCVNKCFSCNACIPTLVT--HHPG-- 208 S +F+P S S +P+ +Q+K V+GS+PP CVN+C +C C+ LVT HH Sbjct: 22 SLTFLPPVSAVSSMPSRGSEDMKQKKMVLGSRPPQCVNRCSNCKPCMAALVTPPHHKNGV 81 Query: 207 QKKSSLNEDSNYYPVSWKCRCVKNISEP 124 + SS D +YY +SWKC+C +P Sbjct: 82 RGPSSSKGDESYYLLSWKCKCGDKYFQP 109 >ref|XP_003597899.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] gi|355486947|gb|AES68150.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] Length = 112 Score = 67.8 bits (164), Expect = 4e-09 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%) Frame = -1 Query: 306 QRKHVVGSKPPLCVNKCFSCNACIPTLVTH-HPGQKK--------SSLNEDSNYYPVSWK 154 +RK +GSKPP+CVNKC C C+ T+V + H Q+K S ED +YY +SWK Sbjct: 43 ERKVAIGSKPPVCVNKCMKCRPCMATVVVNDHDHQRKRKMKGFKLESSQEDDSYYLLSWK 102 Query: 153 CRCVKNISEP 124 CRC + +P Sbjct: 103 CRCGNKLFQP 112 >ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis] gi|223536295|gb|EEF37947.1| hypothetical protein RCOM_0224470 [Ricinus communis] Length = 108 Score = 66.2 bits (160), Expect = 1e-08 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Frame = -1 Query: 336 SSYLPNYAERQRKHVVGSKPPLCVNKCFSCNACIPTLVTHHPGQKKSSLNE-DSNYYPVS 160 S YL + +Q K V+GS+PP C+N+C +C C+ LVT P K+SL+ D +YY +S Sbjct: 39 SPYLRDNDGKQMKMVLGSRPPQCINRCLNCRPCMAALVT--PPHHKTSLSRGDESYYLLS 96 Query: 159 WKCRCVKNISEP 124 WKC+C +P Sbjct: 97 WKCKCGDKYFQP 108 >ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] gi|355510400|gb|AES91542.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] Length = 92 Score = 64.7 bits (156), Expect = 4e-08 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 6/67 (8%) Frame = -1 Query: 306 QRKHVVGSKPPLCVNKCFSCNACIPTLVT---HHPGQ---KKSSLNEDSNYYPVSWKCRC 145 Q+K V+GS+PP CVNKC +C C+ TLV H GQ K + +D YY +SWKC+C Sbjct: 26 QKKSVLGSRPPRCVNKCLNCRPCMATLVISPHHKVGQIHKAKITAEKDEGYYLMSWKCKC 85 Query: 144 VKNISEP 124 +P Sbjct: 86 GNKFFQP 92 >ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] gi|355505443|gb|AES86585.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula] Length = 111 Score = 64.7 bits (156), Expect = 4e-08 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 6/72 (8%) Frame = -1 Query: 321 NYAERQRKHVVGSKPPLCVNKCFSCNACIPTLVTHHPGQKKSSL------NEDSNYYPVS 160 N + + RK V+GSKPP C+NKC +C CI TLV QK+ S +++ YY ++ Sbjct: 43 NDSLQDRKMVIGSKPPACLNKCMNCRPCIATLVV---SQKRKSYKVLSRGDDNDTYYLLA 99 Query: 159 WKCRCVKNISEP 124 WKCRC + +P Sbjct: 100 WKCRCGNKVFQP 111