BLASTX nr result

ID: Coptis25_contig00010023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010023
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   210   8e-69
ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...   209   2e-68
gb|AFA37967.1| SVP1 [Actinidia chinensis]                             208   5e-68
gb|AFA37963.1| SVP1 [Actinidia deliciosa]                             205   4e-67
emb|CAL36572.1| incomposita homologue [Misopates orontium]            201   3e-66

>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS domain
            class transcription factor [Malus x domestica]
          Length = 224

 Score =  210 bits (535), Expect(2) = 8e-69
 Identities = 116/185 (62%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
 Frame = -2

Query: 1001 DADVALIIFSATGKVFEYSSSSMKEILERHNMHSKNLQKVDQPSLELQL-ENGNYARLSK 825
            DAD+ALIIFS+TGK+FEY+SSSMKEILERHN+HSKNL+K++QPSL+LQL EN NY RLSK
Sbjct: 40   DADIALIIFSSTGKLFEYASSSMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSK 99

Query: 824  EVTERSRQLRHMRGEEIQGLNIXXXXXXXXXXXXXLGRVLNTKSERIMSEISNLQSKGMQ 645
            E+  +S QLR MRGEEIQGLN+             LGRV+  KSE+IM EI +LQ  GMQ
Sbjct: 100  EIAAKSHQLRQMRGEEIQGLNLEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQ 159

Query: 644  LMEENERLRQQMLGMSKGQKYVAVDSDNVVHYEEGQXXXXXXXXXXXSGGPPQDYDSSDT 465
            LMEENERLRQQ+   S G++ V VDS+N +  EEGQ           + G PQDYDSSDT
Sbjct: 160  LMEENERLRQQVAEKSDGRRLVQVDSEN-MFTEEGQSSESVTNPCNSNNG-PQDYDSSDT 217

Query: 464  SLKLG 450
            SLKLG
Sbjct: 218  SLKLG 222



 Score = 78.2 bits (191), Expect(2) = 8e-69
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = -1

Query: 1176 MAREKIQIRKISNTTARQVTFSKRRRGLIKKAEELSILCDADV 1048
            MAREKIQI+KI N TARQVTFSKRRRGL+KKAEELS+LCDAD+
Sbjct: 1    MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADI 43


>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
            gi|297744859|emb|CBI38273.3| unnamed protein product
            [Vitis vinifera]
          Length = 227

 Score =  209 bits (533), Expect(2) = 2e-68
 Identities = 116/188 (61%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
 Frame = -2

Query: 1001 DADVALIIFSATGKVFEYSSSSMKEILERHNMHSKNLQKVDQPSLELQL-ENGNYARLSK 825
            DADVALIIFS+TGK+FE+SSSSMKEILE+H++ SKNL+K++QPSLELQL EN N++RLSK
Sbjct: 40   DADVALIIFSSTGKLFEFSSSSMKEILEKHSLQSKNLEKLEQPSLELQLVENNNHSRLSK 99

Query: 824  EVTERSRQLRHMRGEEIQGLNIXXXXXXXXXXXXXLGRVLNTKSERIMSEISNLQSKGMQ 645
            EV ++S +LR MRGEE+QGLNI             L RV+  K ERIM EI++LQSKG+Q
Sbjct: 100  EVADKSHKLRQMRGEELQGLNIEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQ 159

Query: 644  LMEENERLRQQMLGMSKGQKYVAVDSDNVVHYEEGQXXXXXXXXXXXSGGPPQDYDSSDT 465
            LMEENERLRQQ++ +S  ++ VA DS+N+ H EEGQ           S GPPQDY+SSDT
Sbjct: 160  LMEENERLRQQVVEISNRRRQVAGDSENMFH-EEGQ-SSESVTNVSNSNGPPQDYESSDT 217

Query: 464  SLKLGLTF 441
            SLKLGL +
Sbjct: 218  SLKLGLPY 225



 Score = 77.8 bits (190), Expect(2) = 2e-68
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 1176 MAREKIQIRKISNTTARQVTFSKRRRGLIKKAEELSILCDADV 1048
            MAREKIQI+KI N TARQVTFSKRRRGL KKAEELS+LCDADV
Sbjct: 1    MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADV 43


>gb|AFA37967.1| SVP1 [Actinidia chinensis]
          Length = 227

 Score =  208 bits (529), Expect(2) = 5e-68
 Identities = 114/188 (60%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
 Frame = -2

Query: 1001 DADVALIIFSATGKVFEYSSSSMKEILERHNMHSKNLQKVDQPSLELQL-ENGNYARLSK 825
            DADVALIIFS+TGK+F YSS+ MK ILERHN+HSKNL+K++QPS ELQL EN NY RLSK
Sbjct: 40   DADVALIIFSSTGKLFHYSSTDMKGILERHNVHSKNLEKLEQPSTELQLVENSNYTRLSK 99

Query: 824  EVTERSRQLRHMRGEEIQGLNIXXXXXXXXXXXXXLGRVLNTKSERIMSEISNLQSKGMQ 645
            EV E+S QLR MRGEE+QGLNI             LGRV+  K E+IM+EI++LQ KGM 
Sbjct: 100  EVVEKSHQLRKMRGEELQGLNIEELQQLERSLEAGLGRVIEKKGEKIMNEITHLQQKGMH 159

Query: 644  LMEENERLRQQMLGMSKGQKYVAVDSDNVVHYEEGQXXXXXXXXXXXSGGPPQDYDSSDT 465
            LM+ENERLRQQ++   K +K+ A DSDNV++ E+GQ           + GP QDY+SSDT
Sbjct: 160  LMDENERLRQQVMEACKARKHSATDSDNVIN-EQGQSSESVTNICNST-GPMQDYESSDT 217

Query: 464  SLKLGLTF 441
            SLKLGL +
Sbjct: 218  SLKLGLPY 225



 Score = 77.8 bits (190), Expect(2) = 5e-68
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -1

Query: 1176 MAREKIQIRKISNTTARQVTFSKRRRGLIKKAEELSILCDADV 1048
            MAREKI+IRKI+N TARQVTFSKRRRGL KKAEELS+LCDADV
Sbjct: 1    MAREKIKIRKINNATARQVTFSKRRRGLFKKAEELSVLCDADV 43


>gb|AFA37963.1| SVP1 [Actinidia deliciosa]
          Length = 227

 Score =  205 bits (521), Expect(2) = 4e-67
 Identities = 113/188 (60%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
 Frame = -2

Query: 1001 DADVALIIFSATGKVFEYSSSSMKEILERHNMHSKNLQKVDQPSLELQL-ENGNYARLSK 825
            DADVALIIFS+TGK+F YSSS MK ILERHN+HSKNL+K++QPS ELQL EN NY RLSK
Sbjct: 40   DADVALIIFSSTGKLFHYSSSDMKGILERHNVHSKNLEKLEQPSTELQLVENSNYTRLSK 99

Query: 824  EVTERSRQLRHMRGEEIQGLNIXXXXXXXXXXXXXLGRVLNTKSERIMSEISNLQSKGMQ 645
            EV E+S QLR MRGEE+QGLNI             L RV+  K E+IM+EI++LQ KGM 
Sbjct: 100  EVVEKSHQLRKMRGEELQGLNIEELQQLERSLEAGLDRVIEKKGEKIMNEITHLQQKGMH 159

Query: 644  LMEENERLRQQMLGMSKGQKYVAVDSDNVVHYEEGQXXXXXXXXXXXSGGPPQDYDSSDT 465
            LM+ENERLRQQ++   K +K+ A DS+NV++ E+GQ           + GP QDY+SSDT
Sbjct: 160  LMDENERLRQQVMEACKARKHSATDSENVIN-EQGQSSESVTNICNST-GPMQDYESSDT 217

Query: 464  SLKLGLTF 441
            SLKLGL +
Sbjct: 218  SLKLGLPY 225



 Score = 77.8 bits (190), Expect(2) = 4e-67
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -1

Query: 1176 MAREKIQIRKISNTTARQVTFSKRRRGLIKKAEELSILCDADV 1048
            MAREKI+IRKI+N TARQVTFSKRRRGL KKAEELS+LCDADV
Sbjct: 1    MAREKIKIRKINNATARQVTFSKRRRGLFKKAEELSVLCDADV 43


>emb|CAL36572.1| incomposita homologue [Misopates orontium]
          Length = 229

 Score =  201 bits (512), Expect(2) = 3e-66
 Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 2/189 (1%)
 Frame = -2

Query: 1001 DADVALIIFSATGKVFEYSSSSMKEILERHNMHSKNLQKVDQPSLELQL-ENGNYARLSK 825
            DADVALIIFS+TGK+FEY+SSSMKEILERHN+HSKNL K++QPSLELQL E+ N ARLS+
Sbjct: 40   DADVALIIFSSTGKLFEYASSSMKEILERHNLHSKNLGKMEQPSLELQLVEDSNCARLSR 99

Query: 824  EVTERSRQLRHMRGEEIQGLNIXXXXXXXXXXXXXLGRVLNTKSERIMSEISNLQSKGMQ 645
            EV ERS+QLR MRGEE+QGLNI             L RVL+ K E+IM+EI+ LQ KG Q
Sbjct: 100  EVAERSQQLRRMRGEELQGLNIEELQRLERSLEVGLSRVLDKKGEKIMNEINQLQEKGQQ 159

Query: 644  LMEENERLRQQMLGMSKGQKYVAVDSDNVVH-YEEGQXXXXXXXXXXXSGGPPQDYDSSD 468
            LM+EN+RL+QQ++ +S  Q+  A     ++H YEEGQ           + G PQDYD SD
Sbjct: 160  LMQENQRLKQQVVDISNCQQITATPDSEIIHLYEEGQSSESVTYTCNST-GLPQDYDCSD 218

Query: 467  TSLKLGLTF 441
            T LKLGL +
Sbjct: 219  TYLKLGLPY 227



 Score = 78.6 bits (192), Expect(2) = 3e-66
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -1

Query: 1176 MAREKIQIRKISNTTARQVTFSKRRRGLIKKAEELSILCDADV 1048
            MAREKIQI+KI NTTARQVTFSKRRRGL KKAEEL++LCDADV
Sbjct: 1    MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAEELAVLCDADV 43


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