BLASTX nr result

ID: Coptis25_contig00010001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010001
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521001.1| Protein mrp, putative [Ricinus communis] gi|...    71   3e-10
ref|XP_003536923.1| PREDICTED: iron-sulfur protein NUBPL-like [G...    69   1e-09
ref|XP_002307635.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_002300792.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
gb|ACG34330.1| nucleotide-binding protein-like [Zea mays]              68   2e-09

>ref|XP_002521001.1| Protein mrp, putative [Ricinus communis]
           gi|223539838|gb|EEF41418.1| Protein mrp, putative
           [Ricinus communis]
          Length = 293

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -2

Query: 104 AEMKMVPIENYGVKCMSIGFLVEKDAPIVWRGPM 3
           A+ KM+PIENYGVKCMSIGFLVEKDAPIVWRGPM
Sbjct: 91  ADTKMIPIENYGVKCMSIGFLVEKDAPIVWRGPM 124


>ref|XP_003536923.1| PREDICTED: iron-sulfur protein NUBPL-like [Glycine max]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 EMKMVPIENYGVKCMSIGFLVEKDAPIVWRGPM 3
           + KM+P+ENYG+KCMSIGFLVEKDAPIVWRGPM
Sbjct: 80  DKKMIPVENYGIKCMSIGFLVEKDAPIVWRGPM 112


>ref|XP_002307635.1| predicted protein [Populus trichocarpa] gi|222857084|gb|EEE94631.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 EMKMVPIENYGVKCMSIGFLVEKDAPIVWRGPM 3
           + KM+PIENYGVKCMS+GFLVEKDAPIVWRGPM
Sbjct: 92  DKKMIPIENYGVKCMSMGFLVEKDAPIVWRGPM 124


>ref|XP_002300792.1| predicted protein [Populus trichocarpa] gi|222842518|gb|EEE80065.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 101 EMKMVPIENYGVKCMSIGFLVEKDAPIVWRGPM 3
           + KM+PIENYGVKCMS+GFLVEKDAPIVWRGPM
Sbjct: 71  DKKMIPIENYGVKCMSMGFLVEKDAPIVWRGPM 103


>gb|ACG34330.1| nucleotide-binding protein-like [Zea mays]
          Length = 214

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -2

Query: 110 LLAEMKMVPIENYGVKCMSIGFLVEKDAPIVWRGPM 3
           L  +MKM+PIEN+GV+CMSIGFLV+KDAPIVWRGPM
Sbjct: 10  LSEDMKMIPIENHGVRCMSIGFLVDKDAPIVWRGPM 45


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