BLASTX nr result

ID: Coptis25_contig00009837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009837
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group] g...    85   7e-15
ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [S...    84   1e-14
gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indi...    83   2e-14
ref|NP_001048178.1| Os02g0758800 [Oryza sativa Japonica Group] g...    73   2e-11
gb|EAY87599.1| hypothetical protein OsI_09010 [Oryza sativa Indi...    73   2e-11

>ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group]
           gi|62734521|gb|AAX96630.1| basic blue copper protein
           [Oryza sativa Japonica Group] gi|77550421|gb|ABA93218.1|
           Plastocyanin-like domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113645006|dbj|BAF28147.1| Os11g0428800 [Oryza sativa
           Japonica Group] gi|125534214|gb|EAY80762.1| hypothetical
           protein OsI_35940 [Oryza sativa Indica Group]
           gi|125576993|gb|EAZ18215.1| hypothetical protein
           OsJ_33756 [Oryza sativa Japonica Group]
           gi|215769454|dbj|BAH01683.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 124

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = +3

Query: 87  IQVLFLALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAH 266
           + ++ L LL  A+     A TH VG++NGW FSVS+  WA+ K FAAGDTLVFNY   AH
Sbjct: 6   VGLVVLGLLALAFSTTVLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAH 65

Query: 267 NVVPVKIAGYRSCK 308
           NV+ V  A YRSCK
Sbjct: 66  NVLAVDAATYRSCK 79


>ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [Sorghum bicolor]
           gi|241935663|gb|EES08808.1| hypothetical protein
           SORBIDRAFT_05g023920 [Sorghum bicolor]
          Length = 126

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
 Frame = +3

Query: 69  MRRSKCIQVLF---LALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTL 239
           M R  C  VL     +LL+ + L +++  TH VG++ GWGFSVSY  W+  K+FAAGDTL
Sbjct: 1   MGRGMCSAVLVALGFSLLVCSALVSAE--THVVGDSKGWGFSVSYDSWSGGKTFAAGDTL 58

Query: 240 VFNYPASAHNVVPVKIAGYRSCK 308
           VFNY A  HN V V  + YRSCK
Sbjct: 59  VFNYQAGVHNAVAVSASEYRSCK 81


>gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indica Group]
          Length = 127

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/56 (66%), Positives = 42/56 (75%)
 Frame = +3

Query: 141 AATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAHNVVPVKIAGYRSCK 308
           A TH VG++ GWGFSV+Y  WA+ K+FAAGDTLVFNY A  HNVV    A YRSCK
Sbjct: 27  AETHVVGDSKGWGFSVAYDSWASGKAFAAGDTLVFNYQAGVHNVVAASAAEYRSCK 82


>ref|NP_001048178.1| Os02g0758800 [Oryza sativa Japonica Group]
           gi|46805696|dbj|BAD17097.1| putative Blue copper protein
           precursor [Oryza sativa Japonica Group]
           gi|113537709|dbj|BAF10092.1| Os02g0758800 [Oryza sativa
           Japonica Group] gi|125583756|gb|EAZ24687.1| hypothetical
           protein OsJ_08457 [Oryza sativa Japonica Group]
           gi|215701121|dbj|BAG92545.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 246

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = +3

Query: 105 ALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAHNVVPVK 284
           ALL+ A   ++ A ++ VG+ +GW   V YT WA  KSF  GD+LVF Y + AH VV V 
Sbjct: 13  ALLLAACASSAAATSYTVGDASGWTIGVDYTSWAGSKSFKVGDSLVFKYASGAHTVVEVS 72

Query: 285 IAGYRSCKA 311
            AGY +C A
Sbjct: 73  AAGYLACAA 81


>gb|EAY87599.1| hypothetical protein OsI_09010 [Oryza sativa Indica Group]
          Length = 246

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = +3

Query: 105 ALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANEKSFAAGDTLVFNYPASAHNVVPVK 284
           ALL+ A   ++ A ++ VG+ +GW   V YT WA  KSF  GD+LVF Y + AH VV V 
Sbjct: 13  ALLLAACASSAAATSYTVGDASGWTIGVDYTSWAGSKSFKVGDSLVFKYASGAHTVVEVS 72

Query: 285 IAGYRSCKA 311
            AGY +C A
Sbjct: 73  AAGYLACAA 81


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