BLASTX nr result

ID: Coptis25_contig00009793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009793
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267...   287   2e-75
ref|XP_002300986.1| predicted protein [Populus trichocarpa] gi|2...   285   8e-75
ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
ref|XP_002513758.1| conserved hypothetical protein [Ricinus comm...   268   6e-70
ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arab...   265   6e-69

>ref|XP_002285859.1| PREDICTED: uncharacterized protein LOC100267707 [Vitis vinifera]
          Length = 274

 Score =  287 bits (734), Expect = 2e-75
 Identities = 146/226 (64%), Positives = 165/226 (73%), Gaps = 2/226 (0%)
 Frame = -3

Query: 674 MARSQEKNNT--GAFFIATLLLWSVSIIFEIFFNKRTELVAIIAGCFFYQFANCVIRFTV 501
           MAR+ +  N   GAFF+ATLLLW +S++FEI FNKR EL++++ G  FYQFAN VIR  V
Sbjct: 1   MARAPQGQNKAPGAFFLATLLLWMISVLFEIVFNKRRELLSVVGGFCFYQFANWVIRSWV 60

Query: 500 SRDPLFVNTCXXXXXXXXXXXXXXXXXINQWIAKGPGKMFEHSQLFAATWPGAYSALCFS 321
           S+DPL VNTC                 +N+ I  G   MFEHS+L   TWP AY ALCFS
Sbjct: 61  SKDPLLVNTCVSLLHSSITSASVIFILVNELIRMGSNGMFEHSKLVGNTWPWAYPALCFS 120

Query: 320 SGYFAYDQWDMLHYRLYSGFIPSILVHHLVLLVCFTLALFRXXXXXXXXXXXICEVHSIF 141
            GYFAYDQWDMLHYRLYSG+IPSILVHHL+LLVCFTLAL+R           ICE+HSIF
Sbjct: 121 CGYFAYDQWDMLHYRLYSGWIPSILVHHLLLLVCFTLALYRNVTINYLILTLICELHSIF 180

Query: 140 LHTRKVRRMAGIRDAKSKIVKMEWVLSWTTFLVARLASHILITIKL 3
           LHTRKVRRMAGIRDAKSK VK EWVLSW TF+VAR A HILITIKL
Sbjct: 181 LHTRKVRRMAGIRDAKSKAVKAEWVLSWITFIVARFAPHILITIKL 226


>ref|XP_002300986.1| predicted protein [Populus trichocarpa] gi|222842712|gb|EEE80259.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  285 bits (728), Expect = 8e-75
 Identities = 143/227 (62%), Positives = 165/227 (72%), Gaps = 1/227 (0%)
 Frame = -3

Query: 680 RRMARSQ-EKNNTGAFFIATLLLWSVSIIFEIFFNKRTELVAIIAGCFFYQFANCVIRFT 504
           RR ++SQ EKN  G FF+ATL+LW VS++FEI FNKR+EL+ I+AG  F+Q AN V+R  
Sbjct: 3   RRTSQSQNEKNKAGTFFLATLILWFVSVLFEIIFNKRSELLWIVAGAVFFQIANWVVRSF 62

Query: 503 VSRDPLFVNTCXXXXXXXXXXXXXXXXXINQWIAKGPGKMFEHSQLFAATWPGAYSALCF 324
           +SRDPLFVNT                   NQ + KGP  MFEHSQL   TW  AY+ALCF
Sbjct: 63  ISRDPLFVNTSVSLLHSTIISVSVVFILANQRLKKGPNGMFEHSQLVGGTWEWAYAALCF 122

Query: 323 SSGYFAYDQWDMLHYRLYSGFIPSILVHHLVLLVCFTLALFRXXXXXXXXXXXICEVHSI 144
           S GYFAYDQ DMLHYRLYSG IPSILVHHL+LLVCFTLAL+R           +CE+HSI
Sbjct: 123 SCGYFAYDQLDMLHYRLYSGLIPSILVHHLILLVCFTLALYRNVTINYLILTLVCELHSI 182

Query: 143 FLHTRKVRRMAGIRDAKSKIVKMEWVLSWTTFLVARLASHILITIKL 3
           FLH RKVRRMAG+RDAKS IV+MEWVL+W TF+ AR  SHILITIKL
Sbjct: 183 FLHVRKVRRMAGVRDAKSTIVRMEWVLNWLTFIFARSLSHILITIKL 229


>ref|XP_002307436.1| predicted protein [Populus trichocarpa] gi|222856885|gb|EEE94432.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  270 bits (689), Expect = 3e-70
 Identities = 135/219 (61%), Positives = 157/219 (71%)
 Frame = -3

Query: 659 EKNNTGAFFIATLLLWSVSIIFEIFFNKRTELVAIIAGCFFYQFANCVIRFTVSRDPLFV 480
           EKN  GAFF+ATL+LW VS++FEIFFNKRTEL+ I+AG   +Q AN  IR  VSRDPLFV
Sbjct: 11  EKNKVGAFFLATLILWFVSVLFEIFFNKRTELLWIVAGACLFQIANWAIRSFVSRDPLFV 70

Query: 479 NTCXXXXXXXXXXXXXXXXXINQWIAKGPGKMFEHSQLFAATWPGAYSALCFSSGYFAYD 300
           NT                  +NQ +  G   MFEHSQL   TW  AY+ALCFS GYFAYD
Sbjct: 71  NTSVSLLHSTIISVSVVSILVNQCLKNGSDGMFEHSQLVGGTWEWAYAALCFSCGYFAYD 130

Query: 299 QWDMLHYRLYSGFIPSILVHHLVLLVCFTLALFRXXXXXXXXXXXICEVHSIFLHTRKVR 120
           Q DML YRLYSG IPSILVHH++LLVCFTLAL+R           +CE+HSIFLH RKVR
Sbjct: 131 QLDMLFYRLYSGLIPSILVHHMILLVCFTLALYRNVTINYLILTLVCELHSIFLHVRKVR 190

Query: 119 RMAGIRDAKSKIVKMEWVLSWTTFLVARLASHILITIKL 3
           RMAGIR+AKS IV++EWVL+W TF+ AR  +HILIT+KL
Sbjct: 191 RMAGIRNAKSTIVRIEWVLNWLTFIFARSLTHILITVKL 229


>ref|XP_002513758.1| conserved hypothetical protein [Ricinus communis]
           gi|223546844|gb|EEF48341.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 281

 Score =  268 bits (686), Expect = 6e-70
 Identities = 133/219 (60%), Positives = 154/219 (70%)
 Frame = -3

Query: 659 EKNNTGAFFIATLLLWSVSIIFEIFFNKRTELVAIIAGCFFYQFANCVIRFTVSRDPLFV 480
           + N  G FF+ATL+LW +S++FEI FN+R EL +IIAG FF+Q  N  IRF VSRDPLFV
Sbjct: 10  DHNRAGTFFLATLILWFISVLFEILFNQRRELYSIIAGAFFFQITNWAIRFLVSRDPLFV 69

Query: 479 NTCXXXXXXXXXXXXXXXXXINQWIAKGPGKMFEHSQLFAATWPGAYSALCFSSGYFAYD 300
           NT                  +NQ++      MFEHSQL   TW  AY ALCFS GYFAYD
Sbjct: 70  NTSVSLLHSTITSVSVVFILVNQYLNGASNGMFEHSQLVGGTWQWAYPALCFSCGYFAYD 129

Query: 299 QWDMLHYRLYSGFIPSILVHHLVLLVCFTLALFRXXXXXXXXXXXICEVHSIFLHTRKVR 120
           Q DML YRLYSG IPSIL+HHL+LL+CFTLAL+R           ICE+HSIFLH RKVR
Sbjct: 130 QLDMLLYRLYSGLIPSILMHHLILLICFTLALYRNVTVNYLILTLICELHSIFLHVRKVR 189

Query: 119 RMAGIRDAKSKIVKMEWVLSWTTFLVARLASHILITIKL 3
           RMAG+RDAKS IVK+EWVL+W TF+ AR  SHILITIKL
Sbjct: 190 RMAGVRDAKSNIVKLEWVLNWVTFIFARCLSHILITIKL 228


>ref|XP_002890465.1| hypothetical protein ARALYDRAFT_472418 [Arabidopsis lyrata subsp.
           lyrata] gi|297336307|gb|EFH66724.1| hypothetical protein
           ARALYDRAFT_472418 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  265 bits (677), Expect = 6e-69
 Identities = 132/219 (60%), Positives = 155/219 (70%)
 Frame = -3

Query: 659 EKNNTGAFFIATLLLWSVSIIFEIFFNKRTELVAIIAGCFFYQFANCVIRFTVSRDPLFV 480
           +KN  G FF+ATLLLW VS++FEI FN RTEL+ +I G  F+Q  N V+R  +SRDPLFV
Sbjct: 12  KKNGAGEFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPLFV 71

Query: 479 NTCXXXXXXXXXXXXXXXXXINQWIAKGPGKMFEHSQLFAATWPGAYSALCFSSGYFAYD 300
           NT                  +NQ +AKG  +MF+HS+L   TW  AY ALCFS GYFAYD
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYD 131

Query: 299 QWDMLHYRLYSGFIPSILVHHLVLLVCFTLALFRXXXXXXXXXXXICEVHSIFLHTRKVR 120
           QWDML YRLYSG IPSILVHHLVLLVCFTLAL+R           ICE+HSIFLH RK+R
Sbjct: 132 QWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLR 191

Query: 119 RMAGIRDAKSKIVKMEWVLSWTTFLVARLASHILITIKL 3
           RMAGIRD+ + +VK+EWVL+WT F+ AR   HILITIKL
Sbjct: 192 RMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKL 230


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