BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009196
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   124   6e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   121   3e-25
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   118   3e-24
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub...   115   3e-23
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                115   3e-23

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score =  124 bits (310), Expect = 6e-26
 Identities = 100/315 (31%), Positives = 142/315 (45%), Gaps = 18/315 (5%)
 Frame = -3

Query: 894 LPVDIVFDIFARLPLDTISECKWVSKAWYDLVLHPRFADIYFARSR--TSLPCVVFFSRY 721
           LP +I  DI +RLP+ ++ + K V +AW  LV  P+  D+Y + S   T  PC++    +
Sbjct: 28  LPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDF 87

Query: 720 LPSYLIDPISLGNYETSATAHNLKLKGFKENFRIKCGWVC----FEVVGTVNGLICYCPE 553
                  PI    Y     AH  + +  K   RI   +      FEVVG+ NGL+C    
Sbjct: 88  -------PIRNNLYFVDFAAHEEEKEKVK---RIPAPFSSMMPEFEVVGSCNGLLCL--- 134

Query: 552 SCDYEPVPYYICNPITRDYLMPPTSLKKDIVPIGSGFGFDSLNNEYKLLRILRNSSEDG- 376
           S        YI NP T  Y   P SL+     + SGFGF+    EYK++RI+   +  G 
Sbjct: 135 SDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGG 194

Query: 375 -----------NEVEVFTLGSDSWREITINVPYIYYLSRKFCVLVNGCLHWVGVANLKTT 229
                      +EV++ TLG   WR +   V Y   + R    LVNG LHW+     +  
Sbjct: 195 YPRSRRIIYPLSEVQILTLGCPEWRSLG-KVSY-RLVRRASGALVNGRLHWIS----RPC 248

Query: 228 KNVECTTILSFNVATEDFDLIKLPPLRTKGDWGTMETELMVLGERLCVMENSPWGEKEIW 49
           +N     ++SF++  E F  +  P     G        L+VL   L       +G  EIW
Sbjct: 249 RNKPARRLVSFDLTDEQFREVSKPDC---GGLNRCNYHLVVLRGCLSAAVYCNYGRLEIW 305

Query: 48  MMKDYGVHSSWAKEY 4
           +MK+Y V  SW KEY
Sbjct: 306 VMKEYNVKESWVKEY 320


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score =  121 bits (304), Expect = 3e-25
 Identities = 98/314 (31%), Positives = 142/314 (45%), Gaps = 17/314 (5%)
 Frame = -3

Query: 894 LPVDIVFDIFARLPLDTISECKWVSKAWYDLVLHPRFADIYFARSRTSL-PCVVFFSRYL 718
           LP +I  DI +RLP+ ++ + K V +AW  + L P   ++Y + S     PCV+    + 
Sbjct: 28  LPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHCDF- 86

Query: 717 PSYLIDPISLGNYETSATAHNLKLKGFKENFRIKCGWVC----FEVVGTVNGLICYCPES 550
                 PI    Y     AH  + +  K   RI+  +      FEVVG+ NGL+C     
Sbjct: 87  ------PIRNNLYFVDFAAHEEEKEKVK---RIRAPFSSMMPEFEVVGSCNGLLCLSDSL 137

Query: 549 CDYEPVPYYICNPITRDYLMPPTSLKKDIVPIGSGFGFDSLNNEYKLLRILRNSSEDG-- 376
            +      YI NP T  Y   P SL+     +  GFGF+   NEYK++RI+   +  G  
Sbjct: 138 FNDS---LYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRY 194

Query: 375 ----------NEVEVFTLGSDSWREITINVPYIYYLSRKFCVLVNGCLHWVGVANLKTTK 226
                     ++V++ TLG   WR +   V Y   + R    LVNG LHWV     +  +
Sbjct: 195 PRSRRIIYPLSQVQILTLGCPGWRSLG-KVSY-RLVRRASETLVNGRLHWVS----RPCR 248

Query: 225 NVECTTILSFNVATEDFDLIKLPPLRTKGDWGTMETELMVLGERLCVMENSPWGEKEIWM 46
           N     ++SF++  E F  +  P     G     +  L VL   L V     +G  EIW+
Sbjct: 249 NKPARRLVSFDLTDEQFREVPKPDC---GGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWV 305

Query: 45  MKDYGVHSSWAKEY 4
           MK+Y V  SW KEY
Sbjct: 306 MKEYNVKESWVKEY 319


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score =  118 bits (296), Expect = 3e-24
 Identities = 103/326 (31%), Positives = 149/326 (45%), Gaps = 14/326 (4%)
 Frame = -3

Query: 936 DEKEQQNKKEVFSKLPVDIVFDIFARLPLDTISECKWVSKAWYDLVLHPRFADIYFARSR 757
           +E  +    E F KLP +I FDI +R P+ ++ ECK VS+ WY  V +P  A+++  R+ 
Sbjct: 8   EETSRNPGSESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAA 67

Query: 756 TSLPCVVFFSRYLPSYLIDPISLGNYETSATAHNLKLKGFKENFRIKCGWVCFEVVGTVN 577
               C++FFS + P   ++ + + + E        KLK  K  F        FEVVG+ N
Sbjct: 68  EQNLCLLFFSDW-PRSKLELVQVEHPEPR------KLKTLKTPFESVLSE--FEVVGSCN 118

Query: 576 GLICYCPESCDYEPVPYYICNPIT---RDYLMPPTSLKKDIVPIGSGFGFDSLNNEYKLL 406
           GLIC      D    P YI NP T   R+      S    I  +  GFGF     EYK++
Sbjct: 119 GLICLYDYFSD---DPLYIYNPFTIECRELPRVEASPHSVICRVVFGFGFHPKMEEYKVI 175

Query: 405 RIL----RNSSEDGNEVEVF--TLGSDSWREI-----TINVPYIYYLSRKFCVLVNGCLH 259
           +I+     N+   G   E F  T  + +WR I      +N P           LVN  LH
Sbjct: 176 KIVYYKQGNNDFSGGAPEAFVLTANTPTWRNIGKIGYDLNGPTSE-------ALVNEKLH 228

Query: 258 WVGVANLKTTKNVECTTILSFNVATEDFDLIKLPPLRTKGDWGTMETELMVLGERLCVME 79
           W+    +   + V+   I+SF++ TE F  +  P     G    +   L+ L   L  + 
Sbjct: 229 WLTFCLVH--EEVKYREIVSFDLETEQFQDVPRPGC---GGLDQINYHLVTLRGCLSAIV 283

Query: 78  NSPWGEKEIWMMKDYGVHSSWAKEYV 1
           +   G  EIWMMK Y V +SW KE +
Sbjct: 284 SCNEGSNEIWMMKIYNVKASWRKEMI 309


>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318497|gb|EFH48919.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  115 bits (287), Expect = 3e-23
 Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 28/325 (8%)
 Frame = -3

Query: 894 LPVDIVFDIFARLPLDTISECKWVSKAWYDLVLHPRFADIYFARSRTSLPCVVFFSR-YL 718
           +P+DIV DIF RLP  T+  C+ +SK  Y L+  P F + +  R   S   ++   R  L
Sbjct: 4   IPMDIVNDIFLRLPAKTLVRCRTLSKPCYHLINDPDFIESHLHRVLQSGDHLMILLRGAL 63

Query: 717 PSYLIDPISLGNYETSATAHNLKLKGFKENFRIKCGWVCFEVVGTVNGLICYCPESCDYE 538
             Y +D  SL +   S   H +K  G              EV G+ NGLI          
Sbjct: 64  RLYTVDLDSLDS--VSDVEHPMKRGG------------PTEVFGSSNGLI-----GLSNS 104

Query: 537 PVPYYICNPITRD-YLMPPTSLKKDIVPIGS--------GFGFDSLNNEYKLLRILRNSS 385
           P    + NP TR  + +PP+S+    +P GS        GFG+DS++++YK++R+++   
Sbjct: 105 PTDLAVFNPSTRQIHRLPPSSID---LPDGSSTRGYVFYGFGYDSVSDDYKVVRMVQFKI 161

Query: 384 EDGN--------EVEVFTLGSDSWREI----TINVPYIYYL------SRKFCVLVNGCLH 259
           +  +        EV+VF+L  +SW+ +    T ++  ++Y        R + VL    LH
Sbjct: 162 DSDDELGCSFPYEVKVFSLKKNSWKRVESVSTSSIRLLFYFYYHLLYRRGYGVLAGNSLH 221

Query: 258 WVGVANLKTTKNVECTTILSFNVATEDFDLIKLPPLRTKGDWGTMETELMVLGERLCVME 79
           WV     +    +    I+ F++A E+F +++ P     G+   ++ ++ VL   LC+M 
Sbjct: 222 WV---LPRRPGLIAFNLIVRFDLALEEFGIVRFPETVANGN-VDIQMDISVLDGCLCLMC 277

Query: 78  NSPWGEKEIWMMKDYGVHSSWAKEY 4
           N      ++WMMK+Y V SSW K +
Sbjct: 278 NYDQEYVDVWMMKEYNVRSSWTKVF 302


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score =  115 bits (287), Expect = 3e-23
 Identities = 101/339 (29%), Positives = 148/339 (43%), Gaps = 40/339 (11%)
 Frame = -3

Query: 900 SKLPVDIVFDIFARLPLDTISECKWVSKAWYDLVLHPRFADIYFARSRTSLPCVVFFSRY 721
           +KLP D++ DI  RLP  ++   K VSK WY ++  P F  I++     S   +V F RY
Sbjct: 9   TKLPYDVMIDIMKRLPAKSVIRIKCVSKTWYYMINSPDFISIHYNYDYPSKHFIV-FKRY 67

Query: 720 LPSYLIDPISL-GNYETSATAHNLKLKGFKENFRIKCGWVCFEVVGTVNGLICYCPESCD 544
           L     + I   G    S   ++  LK    N      ++   + G  NG++C       
Sbjct: 68  LEIDAEESIYYNGKNMLSVHCNDDSLKSVAPNTEYLDDYIGVNIAGPCNGIVCI----GS 123

Query: 543 YEPVPYYICNPITRDY-------LMPPTSLKKD-----IVPIGSGFGFDSLNNEYKLLRI 400
           Y  +  Y  NP  R++       L PP  L  D      + +  G GFD   N+YK++RI
Sbjct: 124 YRGIVLY--NPTLREFWELPPSILPPPPYLSSDKKLNYWMDMTMGIGFDPNTNDYKVVRI 181

Query: 399 LR-----------NSSEDGNEVEVFTLGSDSWREI--------TINVPYIYYLSRKFCVL 277
           LR           N   D ++VEV+ L ++SWR I        T++  ++++        
Sbjct: 182 LRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKDLECLVDTLHCSHVFF-------- 233

Query: 276 VNGCLHWVGVANLKTTKNVECTTILSFNVATEDFDLIKLPPLRTKGDWGTMETELMVLGE 97
            NG  HW      + TK+ +   I+SFN + E F +I  P    +G        L VL E
Sbjct: 234 -NGAFHW-----RRYTKS-DDYFIVSFNFSIESFQMIPSP----EGLTDEGRKSLFVLSE 282

Query: 96  RL---CVMENSP-----WGEKEIWMMKDYGVHSSWAKEY 4
            L   C  EN P         +IW+MK YGV  SW KE+
Sbjct: 283 SLALICFTENYPREMLVHQSIDIWVMKKYGVRESWIKEF 321