BLASTX nr result

ID: Coptis25_contig00008686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008686
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]   191   1e-46
ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804...   174   3e-41
ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804...   170   4e-40
gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]           169   5e-40
ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago ...   162   6e-38

>emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]
          Length = 207

 Score =  191 bits (486), Expect = 1e-46
 Identities = 109/208 (52%), Positives = 127/208 (61%), Gaps = 21/208 (10%)
 Frame = -2

Query: 608 MEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNA------ 447
           M+G+D  G+ W+S K+RLG KKMSCCGASW FR ++  V        +   T A      
Sbjct: 1   MDGLDRIGR-WRSIKRRLGFKKMSCCGASWGFRPSTMTVREDDNDDDDGVQTQAQAQAQS 59

Query: 446 ---GQNQVGNLMD-FDPDPDCVGHIPTTG-MNLATALAAEREFRAAQEWEGGSVGPTSA- 285
               Q +VG       PD  CVG  P +  MNLATALAAER+ RAAQ+     VGPT+  
Sbjct: 60  MAQAQEEVGQASPGISPDRGCVGEAPVSPRMNLATALAAERQMRAAQDVATVXVGPTNGG 119

Query: 284 -------SPKRVSLIRLLXXXXXXXXXXXXXXXXES--MCCVCMGRKKGAAFIPCGHTFC 132
                  +P RVSL+RLL                 S  +CCVCMGRKKGAAFIPCGHTFC
Sbjct: 120 TSEGAPGTPLRVSLLRLLEESDGGDGEMEKERGAGSDQLCCVCMGRKKGAAFIPCGHTFC 179

Query: 131 RVCSREIWLNRGSCPLCNRSVLEILDIF 48
           RVCSRE+WLNRGSCPLCNRS+LEILDIF
Sbjct: 180 RVCSRELWLNRGSCPLCNRSILEILDIF 207


>ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804292 [Glycine max]
          Length = 196

 Score =  174 bits (440), Expect = 3e-41
 Identities = 98/194 (50%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
 Frame = -2

Query: 614 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 435
           E+M+GVD   ++ +SFK+R G   M CCGA+W FR+ +            L+ T   Q Q
Sbjct: 25  EQMDGVDSGTRRRRSFKERFGFIGMGCCGATWGFRSDA------------LSVTQGEQQQ 72

Query: 434 VGNLMDFDPDPDCVGHIPT-TGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRVSLIR 258
                  + DP+CVG     +GMNLA ALAAER+ R  QE    + G    +P RVSL+R
Sbjct: 73  Q------ETDPECVGPAGLGSGMNLAAALAAERQLRGPQEEAVRAPG----TPWRVSLMR 122

Query: 257 LLXXXXXXXXXXXXXXXXE----SMCCVCMGRKKGAAFIPCGHTFCRVCSREIWLNRGSC 90
           LL                     S+CCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGSC
Sbjct: 123 LLEETEAEKEKEKEKEENVVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSC 182

Query: 89  PLCNRSVLEILDIF 48
           PLCNRS+LEILDIF
Sbjct: 183 PLCNRSILEILDIF 196


>ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804959 [Glycine max]
          Length = 209

 Score =  170 bits (430), Expect = 4e-40
 Identities = 100/202 (49%), Positives = 121/202 (59%), Gaps = 13/202 (6%)
 Frame = -2

Query: 614 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 435
           E+M+GVD   ++ +S K+R G   M CCGASW FR+ +  V             N G+ +
Sbjct: 28  EQMDGVDGGTRRRRSLKERFGFIGMGCCGASWGFRSDALSV-------------NQGEQE 74

Query: 434 VGNLMDFDPD----PDCVGHIPT-TGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRV 270
                + DP     P+CVG   + +GMNLA ALAAER+ R  QE EGG V     +P RV
Sbjct: 75  --QQQETDPGRVAAPECVGPAGSGSGMNLAAALAAERQLRVPQE-EGGGV----RAPWRV 127

Query: 269 SLIRLLXXXXXXXXXXXXXXXXE--------SMCCVCMGRKKGAAFIPCGHTFCRVCSRE 114
           SL+RLL                +        S+CCVCMGRKKGAA IPCGHTFCRVCSRE
Sbjct: 128 SLMRLLEETEGGDAATAEKEKEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRE 187

Query: 113 IWLNRGSCPLCNRSVLEILDIF 48
           +WLNRGSCPLCNRS+LEILDIF
Sbjct: 188 LWLNRGSCPLCNRSILEILDIF 209


>gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 304

 Score =  169 bits (429), Expect = 5e-40
 Identities = 97/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
 Frame = -2

Query: 614 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 435
           E+M+GVD   ++ +SFK+RLG   + CCGA+W FR++S+              +++ QNQ
Sbjct: 118 EQMDGVDGVPRRRRSFKERLGF--IGCCGANWGFRSSSS--------------SDSQQNQ 161

Query: 434 VGNLMDFDPDPD---CVGHIPTTG-----MNLATALAAEREFRAAQEWEGGSVGPTSASP 279
              ++D DP  D   CV  +  TG     MNLA ALAAER+ R       G  G    +P
Sbjct: 162 Q-RILDTDPSEDPNMCVAPVIQTGSSSSSMNLAAALAAERQLRGPAAETSGGGGRMPGTP 220

Query: 278 KRVSLIRLLXXXXXXXXXXXXXXXXE-------SMCCVCMGRKKGAAFIPCGHTFCRVCS 120
            RVSL+RLL                        S+CCVCMGR KGAAFIPCGHTFCRVCS
Sbjct: 221 WRVSLMRLLEETENGDTVVVKAEEKVGTMAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCS 280

Query: 119 REIWLNRGSCPLCNRSVLEILDIF 48
           RE+WLNRGSCPLCNRS++EILDIF
Sbjct: 281 RELWLNRGSCPLCNRSIIEILDIF 304


>ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago truncatula]
           gi|355511542|gb|AES92684.1| hypothetical protein
           MTR_4g132760 [Medicago truncatula]
          Length = 217

 Score =  162 bits (411), Expect = 6e-38
 Identities = 93/197 (47%), Positives = 115/197 (58%), Gaps = 8/197 (4%)
 Frame = -2

Query: 614 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 435
           E+M+ +D    + +S K+R     M CCGA+W FR                 T    Q Q
Sbjct: 27  EQMDALDSGTTRRRSLKERFRFTGMGCCGATWVFRPIIRHEHHHQRNEEGEATVE--QQQ 84

Query: 434 VGNLMDFDP---DPDCVGHIPTTG--MNLATALAAEREFRAAQEWEGGSVGPTSASPKRV 270
              + D DP   +P+C     ++G  MNLA ALAAER+ R ++E  GG      A+P RV
Sbjct: 85  QLQVQDQDPNPVEPECEAPAGSSGSGMNLAAALAAERQMRVSEEASGGE----GATPWRV 140

Query: 269 SLIRLLXXXXXXXXXXXXXXXXE---SMCCVCMGRKKGAAFIPCGHTFCRVCSREIWLNR 99
           SL++LL                E   S+CCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNR
Sbjct: 141 SLMKLLEETEGENESNAGAVVVEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNR 200

Query: 98  GSCPLCNRSVLEILDIF 48
           G+CPLCNRS+LEILDIF
Sbjct: 201 GNCPLCNRSILEILDIF 217


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