BLASTX nr result

ID: Coptis25_contig00008547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008547
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263538.1| PREDICTED: calmodulin isoform 2 [Vitis vinif...   187   1e-45
ref|XP_002329709.1| predicted protein [Populus trichocarpa] gi|2...   186   4e-45
gb|ACR15761.1| calmodulin isoform 1 [Solanum tuberosum]               185   5e-45
ref|NP_001234786.1| calmodulin [Solanum lycopersicum] gi|115513|...   185   5e-45
gb|AFA89861.2| calmodulin 1 [Lilium longiflorum]                      185   6e-45

>ref|XP_002263538.1| PREDICTED: calmodulin isoform 2 [Vitis vinifera]
           gi|147783668|emb|CAN72522.1| hypothetical protein
           VITISV_019208 [Vitis vinifera]
           gi|296088807|emb|CBI38257.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  187 bits (475), Expect = 1e-45
 Identities = 101/134 (75%), Positives = 102/134 (76%)
 Frame = +3

Query: 81  MAEQLTEEQISEFKEAFSLFXXXXXXXXXXXXXXXXXXXXXXXXXXEAFSLFDKDGDGCI 260
           MAEQLTEEQI+EFKEAFS                                LFDKDGDGCI
Sbjct: 1   MAEQLTEEQIAEFKEAFS--------------------------------LFDKDGDGCI 28

Query: 261 TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 440
           TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE
Sbjct: 29  TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 88

Query: 441 AFKVFDKDQNGFIS 482
           AFKVFDKDQNGFIS
Sbjct: 89  AFKVFDKDQNGFIS 102



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +3

Query: 219 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMA 398
           EAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D +G +++ EF+ +M 
Sbjct: 88  EAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVRMML 147

Query: 399 RK 404
            K
Sbjct: 148 AK 149


>ref|XP_002329709.1| predicted protein [Populus trichocarpa] gi|222870617|gb|EEF07748.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  186 bits (471), Expect = 4e-45
 Identities = 100/134 (74%), Positives = 101/134 (75%)
 Frame = +3

Query: 81  MAEQLTEEQISEFKEAFSLFXXXXXXXXXXXXXXXXXXXXXXXXXXEAFSLFDKDGDGCI 260
           M EQLTEEQI+EFKEAFS                                LFDKDGDGCI
Sbjct: 1   MTEQLTEEQIAEFKEAFS--------------------------------LFDKDGDGCI 28

Query: 261 TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 440
           TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE
Sbjct: 29  TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 88

Query: 441 AFKVFDKDQNGFIS 482
           AFKVFDKDQNGFIS
Sbjct: 89  AFKVFDKDQNGFIS 102



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/62 (43%), Positives = 42/62 (67%)
 Frame = +3

Query: 219 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMA 398
           EAF +FDKD +G I+  EL  VM +LG+  T+ E+++MI E D D +G +++ EF+ +M 
Sbjct: 88  EAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQVNYEEFVRMML 147

Query: 399 RK 404
            K
Sbjct: 148 AK 149


>gb|ACR15761.1| calmodulin isoform 1 [Solanum tuberosum]
          Length = 149

 Score =  185 bits (470), Expect = 5e-45
 Identities = 100/134 (74%), Positives = 102/134 (76%)
 Frame = +3

Query: 81  MAEQLTEEQISEFKEAFSLFXXXXXXXXXXXXXXXXXXXXXXXXXXEAFSLFDKDGDGCI 260
           MAEQLTEEQI+EFKEAFS                                LFDKDGDGCI
Sbjct: 1   MAEQLTEEQIAEFKEAFS--------------------------------LFDKDGDGCI 28

Query: 261 TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 440
           TTKELGTVMRSLGQNPTEAELQDMI+EVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE
Sbjct: 29  TTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 88

Query: 441 AFKVFDKDQNGFIS 482
           AFKVFDKDQNGFIS
Sbjct: 89  AFKVFDKDQNGFIS 102



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +3

Query: 219 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMA 398
           EAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D +G +++ EF+ +M 
Sbjct: 88  EAFKVFDKDQNGFISAAELRHVMTNLGERLTDEEVDEMIREADIDGDGQVNYEEFVRMML 147

Query: 399 RK 404
            K
Sbjct: 148 AK 149


>ref|NP_001234786.1| calmodulin [Solanum lycopersicum] gi|115513|sp|P27161.2|CALM_SOLLC
           RecName: Full=Calmodulin; Short=CaM
           gi|170396|gb|AAA34144.1| calmodulin [Solanum
           lycopersicum] gi|3549695|emb|CAA09302.1| calmodulin 3
           protein [Capsicum annuum] gi|14625401|dbj|BAB61907.1|
           calmodulin NtCaM1 [Nicotiana tabacum]
           gi|14625403|dbj|BAB61908.1| calmodulin NtCaM2 [Nicotiana
           tabacum] gi|21616059|emb|CAC84563.1| putative calmodulin
           [Solanum commersonii]
          Length = 149

 Score =  185 bits (470), Expect = 5e-45
 Identities = 100/134 (74%), Positives = 102/134 (76%)
 Frame = +3

Query: 81  MAEQLTEEQISEFKEAFSLFXXXXXXXXXXXXXXXXXXXXXXXXXXEAFSLFDKDGDGCI 260
           MAEQLTEEQI+EFKEAFS                                LFDKDGDGCI
Sbjct: 1   MAEQLTEEQIAEFKEAFS--------------------------------LFDKDGDGCI 28

Query: 261 TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 440
           TTKELGTVMRSLGQNPTEAELQDMI+EVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE
Sbjct: 29  TTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 88

Query: 441 AFKVFDKDQNGFIS 482
           AFKVFDKDQNGFIS
Sbjct: 89  AFKVFDKDQNGFIS 102



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +3

Query: 219 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMA 398
           EAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D +G +++ EF+ +M 
Sbjct: 88  EAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMML 147

Query: 399 RK 404
            K
Sbjct: 148 AK 149


>gb|AFA89861.2| calmodulin 1 [Lilium longiflorum]
          Length = 149

 Score =  185 bits (469), Expect = 6e-45
 Identities = 99/134 (73%), Positives = 102/134 (76%)
 Frame = +3

Query: 81  MAEQLTEEQISEFKEAFSLFXXXXXXXXXXXXXXXXXXXXXXXXXXEAFSLFDKDGDGCI 260
           MA+QLTE+QI+EFKEAFS                                LFDKDGDGCI
Sbjct: 1   MADQLTEDQIAEFKEAFS--------------------------------LFDKDGDGCI 28

Query: 261 TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 440
           TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE
Sbjct: 29  TTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKE 88

Query: 441 AFKVFDKDQNGFIS 482
           AFKVFDKDQNGFIS
Sbjct: 89  AFKVFDKDQNGFIS 102



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +3

Query: 219 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADQNGTIDFPEFLNLMA 398
           EAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D D +G +++ EF+ +M 
Sbjct: 88  EAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMML 147

Query: 399 RK 404
            K
Sbjct: 148 AK 149


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