BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008380
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   553   e-155
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   514   e-143
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   513   e-143
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   500   e-139
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   500   e-139

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  553 bits (1425), Expect = e-155
 Identities = 297/518 (57%), Positives = 360/518 (69%), Gaps = 45/518 (8%)
 Frame = -3

Query: 1419 STSPPSWHSPSILESFSKKLERDADGR--RRSVGLEHRREARRFSGSSPAVG---TSKVA 1255
            STSPPSWHSPS+++  SKK+E DA  R  RRSVG+E RRE RR SGSSP V    TSKVA
Sbjct: 66   STSPPSWHSPSVIDLLSKKVENDAVSREGRRSVGIERRREGRRLSGSSPTVASLATSKVA 125

Query: 1254 AAEVI-------------------DAGGVELDKSSRKSHRG------------------- 1189
              EV+                   D   ++ ++SSR+S R                    
Sbjct: 126  PGEVVGGNNGIAAMSERSGKSGLRDGRRIKREESSRRSMRTDLLGGYEEPSQDQDGNDSV 185

Query: 1188 NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSGFTLDTDDVQTSHFHSRERCTRLE 1009
            N  ++ + E+KDK+ +  KGK  Q++  KTLSEQL  F +D+D   +SH H + R TR E
Sbjct: 186  NELVSGNSESKDKR-VKQKGKLRQEVLLKTLSEQLKEFPVDSD-AASSHIHLQGRRTRKE 243

Query: 1008 KASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXGSREFGIHNEVSVASNSLAQGPKQS 829
            +  EE E S RGY    NR+KK             G R+ G  NE+SVASNS AQG    
Sbjct: 244  RTGEEPEASIRGYCSGLNRIKKRKFRGARRNRAAIGLRDIGAQNELSVASNSFAQGSVCL 303

Query: 828  KYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGKSILDIAGRSLSCGLSDSRLRKG 649
            K  ME    E  E++VTRAP+NGCGIPWNWSRIHHRGK+ LD+AGRSLSCGLSDSRLR+G
Sbjct: 304  KNEMEEEREEYGERNVTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRRG 363

Query: 648  GCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSGSQESSDKAAWVHEYSGELGIFA 475
            G + QG    DM    +HS +S KS+AE  PLLVE SGSQES++ AAWVH+YSGELGIFA
Sbjct: 364  GSVPQGRDVSDMPMASDHSSASTKSDAEALPLLVEASGSQESTENAAWVHDYSGELGIFA 423

Query: 474  DHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQALSNA 295
            D+ L+HD+DSDLASEARS +++  RGYR  RHQ+LTQKYMPRTF  LVGQNL  QALSNA
Sbjct: 424  DNLLRHDIDSDLASEARSGDQRKFRGYRQDRHQNLTQKYMPRTFGGLVGQNLVAQALSNA 483

Query: 294  VSKRKVGFLYVFYGPHGTGKTSCARIFARALNCQSSDHPKPCGTCSSCVAHDLGKSRNVR 115
            V KRKVGFLYVFYGPHGTGKTSCARIFARALNC S +HPKPCG C+SC+AHD+GKSRN+R
Sbjct: 484  VVKRKVGFLYVFYGPHGTGKTSCARIFARALNCPSMEHPKPCGFCNSCIAHDMGKSRNIR 543

Query: 114  EIGPVGNINFENIMDLLENMLVNQLQSQHKVFILDDCD 1
            E+GPV N++FE IM+LL+N++ +QL +Q++VFI DDCD
Sbjct: 544  EVGPVSNLDFEGIMNLLDNVIASQLPTQYRVFIFDDCD 581


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  514 bits (1324), Expect = e-143
 Identities = 278/518 (53%), Positives = 346/518 (66%), Gaps = 45/518 (8%)
 Frame = -3

Query: 1419 STSPPSWHSPSILESFSKKLERDA--DGRRRSVGLEHRREARRFSGSSP---AVGTSKVA 1255
            S SPPSWHSPS+++   K++E DA   G RRS+G+E R+E RR SG+SP   ++G+S+VA
Sbjct: 66   SASPPSWHSPSVVDLLFKRVENDAVSQGGRRSIGVERRKEGRRLSGTSPPLVSIGSSRVA 125

Query: 1254 AAEVI-------------------DAGGVELDKSSRKSHRG-----NP---------ALT 1174
              E++                   D   V  ++S RK+ R      NP         +L 
Sbjct: 126  PGEIVRGNDGITAPSERSSRSGMGDGRRVGREESGRKNDRPDFLDVNPEEPLNQAGKSLA 185

Query: 1173 NDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGFTLDTDDVQTSHFHSRERCTRLE 1009
             DV     E+K +K+   +GK  QD   KTLSEQL+   LD+DD+ +S+ H R R  R E
Sbjct: 186  EDVISRHSESKARKS-KQRGKNVQDAQVKTLSEQLNDVPLDSDDLASSNIHFRGRFPRQE 244

Query: 1008 KASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXGSREFGIHNEVSVASNSLAQGPKQS 829
            K  +E E   R +    NR K+              SR+    NE+SVASNSLAQ     
Sbjct: 245  KIIKEVEARMRSHGSGMNRGKRRKFRSARRTRVATTSRDIVAENELSVASNSLAQASVHH 304

Query: 828  KYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGKSILDIAGRSLSCGLSDSRLRKG 649
            KY++E  D E  +++VTRAPKNGCGIPWNWSRIHHRGK+ LD+AGRSLSCGLSDSRL+KG
Sbjct: 305  KYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLKKG 363

Query: 648  GCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSGSQESSDKAAWVHEYSGELGIFA 475
               + G    +M      S S  +S+AE  PLLVE SGS  S++ A W H YSGELG+F 
Sbjct: 364  TFAANGRNISEMPVASERSSSCTRSDAEALPLLVEASGSHASTENACWDHYYSGELGLFG 423

Query: 474  DHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQALSNA 295
            D+  KHD+DSDLASEARS +++  RG RH RHQSLTQKYMPRTFRD+VGQNL  QALSNA
Sbjct: 424  DNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQKYMPRTFRDMVGQNLVAQALSNA 483

Query: 294  VSKRKVGFLYVFYGPHGTGKTSCARIFARALNCQSSDHPKPCGTCSSCVAHDLGKSRNVR 115
            V K+KVG LYVFYGPHGTGKTS ARIFARALNC SS+HPKPCG C+ CVAHD+GKSRN+R
Sbjct: 484  VMKKKVGLLYVFYGPHGTGKTSSARIFARALNCNSSEHPKPCGFCNYCVAHDMGKSRNIR 543

Query: 114  EIGPVGNINFENIMDLLENMLVNQLQSQHKVFILDDCD 1
            E+GPV N +FE+IM+LL+NM+V+QL S ++VFI DDCD
Sbjct: 544  EVGPVSNFDFESIMELLDNMIVSQLPSHYRVFIFDDCD 581


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  513 bits (1321), Expect = e-143
 Identities = 277/518 (53%), Positives = 343/518 (66%), Gaps = 45/518 (8%)
 Frame = -3

Query: 1419 STSPPSWHSPSILESFSKKLERDA--DGRRRSVGLEHRREARRFSGSSP---AVGTSKVA 1255
            S SPPSWHSPS+++   K++E DA   G R SVG E R+E RR SG+SP   ++G+S+VA
Sbjct: 66   SASPPSWHSPSVVDLLFKRVENDAVSQGGRMSVGAERRKEGRRLSGTSPPLVSIGSSRVA 125

Query: 1254 AAEVI-------------------DAGGVELDKSSRKSHR--------------GNPALT 1174
              E+                    D   V  ++S RK+ R              G  +L 
Sbjct: 126  PGEIGRGNDGITAPSERSSRSGLGDGRRVGREESGRKNDRPDFLDVNPEEPLYQGGKSLA 185

Query: 1173 NDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGFTLDTDDVQTSHFHSRERCTRLE 1009
             DV     E+K +K+   +GK  +D   KTLSEQL+   LD+DD+ +S+ H R R  R E
Sbjct: 186  EDVISRHSESKARKS-KQRGKNVRDAQVKTLSEQLNDVPLDSDDLASSNIHFRGRFPRQE 244

Query: 1008 KASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXGSREFGIHNEVSVASNSLAQGPKQS 829
            K  EE E+  R +    N+ K+              SR+ G  NE+SVASNSLA      
Sbjct: 245  KVIEEVESRMRSHGSGMNKGKRRKFRSVRRTRVATTSRDIGAENEISVASNSLAH----H 300

Query: 828  KYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGKSILDIAGRSLSCGLSDSRLRKG 649
            KY++E  D E  +++VTRAPKNGCGIPWNWSRIHHRGK+ LD+AGRSLSCGLSDSRL+KG
Sbjct: 301  KYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGKTFLDLAGRSLSCGLSDSRLKKG 359

Query: 648  GCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSGSQESSDKAAWVHEYSGELGIFA 475
               + G    +M      S S  KS+AE  PLLVE SGS  S++ A W H+YSGELG+F 
Sbjct: 360  TFTANGRNISEMPVASERSSSCTKSDAEALPLLVEASGSHASTENACWDHDYSGELGLFG 419

Query: 474  DHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQALSNA 295
            D+  KHD+DSDLASEARS +++  RG RH RHQSLTQKYMP+TFRD++GQNL  QALSNA
Sbjct: 420  DNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQKYMPQTFRDMIGQNLVAQALSNA 479

Query: 294  VSKRKVGFLYVFYGPHGTGKTSCARIFARALNCQSSDHPKPCGTCSSCVAHDLGKSRNVR 115
            V KRKVG LYVFYGPHGTGKTSCARIFARALNC SS+HPKPCG C+ CVAHD+GKSRN+R
Sbjct: 480  VMKRKVGLLYVFYGPHGTGKTSCARIFARALNCNSSEHPKPCGFCNYCVAHDMGKSRNIR 539

Query: 114  EIGPVGNINFENIMDLLENMLVNQLQSQHKVFILDDCD 1
            E+GPV N +FE IMDLL+NM ++QL S ++VFI DDCD
Sbjct: 540  EVGPVSNFDFEGIMDLLDNMTLSQLPSHYRVFIFDDCD 577


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  500 bits (1287), Expect = e-139
 Identities = 276/520 (53%), Positives = 348/520 (66%), Gaps = 47/520 (9%)
 Frame = -3

Query: 1419 STSPPSWHSPSILESFSKKLERDA---DGRRRSVGLEHRREARRFSGSSPA---VGTSKV 1258
            S SPPSWHSPS+++   KK ++DA   +GRR S+G+E RRE RR SG SP    +  SKV
Sbjct: 66   SASPPSWHSPSVVDLLPKKGDKDAAVTEGRR-SIGIERRREGRRLSGGSPPFANLAPSKV 124

Query: 1257 AAAEVI--------------------DAGGVELDKSSRKSHRG----------------- 1189
               E+                     D   ++ ++SSRKS+R                  
Sbjct: 125  VPGELSGGYEGVAAAVSDRSSKSGARDGRRIKREESSRKSNRADLLGGDEDLSHNQEVNG 184

Query: 1188 --NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSGFTLDTDDVQTSHFHSRERCTR 1015
              N  ++ + E+K +K+   KGK SQD H KTLS+QL+   +D+D   +S+ H   R ++
Sbjct: 185  LVNDDVSGNSESKSRKS-KHKGKHSQDFHIKTLSDQLNEIPMDSDVAASSNVHLHGRRSQ 243

Query: 1014 LEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXGSREFGIHNEVSVASNSLAQGPK 835
             +K  EE ETS RGY    NR K+              +R+    NE+SVASNSL QG  
Sbjct: 244  QDKTGEERETSIRGY-SGINRTKRRKFRGARRTRATP-ARDVEGQNEMSVASNSLNQGSV 301

Query: 834  QSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGKSILDIAGRSLSCGLSDSRLR 655
            + +Y +E  + E  + +VTRAP+NGCGIPWNWSRIHHRGK+ LD+AGRSLSCGLSDSRLR
Sbjct: 302  RPRYCIE--EEEYGDPNVTRAPRNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLR 359

Query: 654  KGGCIS--QGGLDMDGECNHSGSSAKSEAEGTPLLVEPSGSQESSDKAAWVHEYSGELGI 481
            KGG  S  +   +M    ++S SS KS+AE  PLLVE S SQES+D A WVH+YSGELGI
Sbjct: 360  KGGMASHDRDAPNMPLASDYSCSSTKSDAEALPLLVEASLSQESTDNAGWVHDYSGELGI 419

Query: 480  FADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQALS 301
            +ADH LK+D+DSDLASEARS  +   R   + RHQ+ TQKYMPRTFRDLVGQNL  QALS
Sbjct: 420  YADHLLKNDVDSDLASEARSGGQHKLRRNHNSRHQNFTQKYMPRTFRDLVGQNLVAQALS 479

Query: 300  NAVSKRKVGFLYVFYGPHGTGKTSCARIFARALNCQSSDHPKPCGTCSSCVAHDLGKSRN 121
            NAV +RKVG LYVFYGPHGTGKTSCARIFARALNCQS +HPKPCG C+SC++HD+GKSRN
Sbjct: 480  NAVVRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEHPKPCGYCNSCISHDMGKSRN 539

Query: 120  VREIGPVGNINFENIMDLLENMLVNQLQSQHKVFILDDCD 1
            +RE+GPV N +F NI+DLL+NM+++ L SQ++VFI D CD
Sbjct: 540  IREVGPVSNFDFGNIVDLLDNMIISHLPSQYRVFIFDGCD 579


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  500 bits (1287), Expect = e-139
 Identities = 285/521 (54%), Positives = 353/521 (67%), Gaps = 48/521 (9%)
 Frame = -3

Query: 1419 STSPPSWHSPSILESFSKKLERDADGR--RRSVGLEHRREARR-FSGSSPA--VGTSKVA 1255
            S SPPSWHSPS+++   KK + DA  R  R SVG E RRE RR F  SSP+  +  SKV 
Sbjct: 66   SASPPSWHSPSVVDLLPKKGDTDATIREGRSSVGTERRREGRRLFGSSSPSANLAPSKVV 125

Query: 1254 AAEVI--------------------DAGGVELDKSSRKSHR-------GNP--------- 1183
             ++V                     D   V+ ++SS+KS+R       G+P         
Sbjct: 126  PSDVSGGNNDGVAAISDRSINSGFRDGRRVKREESSKKSNRVNQLGGDGDPLQDQAVDGL 185

Query: 1182 ---ALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSGFTLDTDDVQTSHFHSRERCTRL 1012
                ++ + E+KD+K+   KGK SQD+H KTLSEQL    +DTD V +S+ H   R TR 
Sbjct: 186  IHDTVSGNSESKDRKS-KHKGKHSQDVHIKTLSEQLHEIPMDTD-VASSNMHLHGRHTRQ 243

Query: 1011 EKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXGSREFGIHNEVSVASNSLAQGPKQ 832
            EK  E  ETS RGY       ++              SR+ G   E+SVASNS AQG  +
Sbjct: 244  EKIVEP-ETSIRGYGGVHRVRRRKFRSTRRTRASAPASRDVGGQKEMSVASNSFAQGSAR 302

Query: 831  SKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGKSILDIAGRSLSCGLSDSRLRK 652
             +Y+ME  + E  +Q+VTRAP+NGCGIPWNWS IHHRGK+ILDIAGRSLSCGLSD+R  K
Sbjct: 303  PRYHME--EEEYGDQNVTRAPRNGCGIPWNWSGIHHRGKTILDIAGRSLSCGLSDTR--K 358

Query: 651  GGCISQGGLDMDG---ECNHSGSSAKSEAEGTPLLVEPSGSQESSDKAAWVHEYSGELGI 481
            G   S G  D  G     + S SS KS+ E  PLLVE SGSQES+D A WVH+YSGELGI
Sbjct: 359  GSTASHGR-DFPGMPVASDRSSSSTKSDVEALPLLVEASGSQESTDNAGWVHDYSGELGI 417

Query: 480  FADHYLKHDLDSDLASEARSHE-RQTGRGYRHRRHQSLTQKYMPRTFRDLVGQNLAVQAL 304
            +ADH LK+D+DSDLASEARS E R+ GR  ++ RHQ+LTQ+YMPRTFRDLVGQNLA QAL
Sbjct: 418  YADHLLKNDIDSDLASEARSGEQRKLGRN-QNGRHQNLTQRYMPRTFRDLVGQNLAAQAL 476

Query: 303  SNAVSKRKVGFLYVFYGPHGTGKTSCARIFARALNCQSSDHPKPCGTCSSCVAHDLGKSR 124
            SNA  +RKVGFLYVFYGPHGTGKTSCARIF+RALNCQS +HPKPCG C+SC++HD+GKSR
Sbjct: 477  SNAAVRRKVGFLYVFYGPHGTGKTSCARIFSRALNCQSLEHPKPCGYCNSCISHDMGKSR 536

Query: 123  NVREIGPVGNINFENIMDLLENMLVNQLQSQHKVFILDDCD 1
            N+RE+GPV N +F++I+DLL+NM+++Q  SQ++VFI DDCD
Sbjct: 537  NIREVGPVSNFDFKSIIDLLDNMIISQTPSQYRVFIFDDCD 577