BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008006
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   384   e-104
ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   383   e-104
ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2...   383   e-104
emb|CBI29975.3| unnamed protein product [Vitis vinifera]              365   7e-99
ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly...   362   6e-98

>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  384 bits (986), Expect = e-104
 Identities = 183/236 (77%), Positives = 208/236 (88%)
 Frame = +3

Query: 15  LRGLELLNLNVCQKISDKGIEAITSASPNLNILSIYWNVRVTDVGVKQITENCRHLLDLN 194
           L+ LE LNLNVCQKISD+G+E ITSA P L + SIYWNVRVTD+G+  + +NC+H++DLN
Sbjct: 110 LQELESLNLNVCQKISDRGVETITSACPKLKVFSIYWNVRVTDIGMTHLVKNCKHIVDLN 169

Query: 195 LSGCKNITDTGLNAVADNYPELEVLNLTRCVKLTDEGLQRVLLKCSCLQSLNLYALSSFT 374
           LSGCKNITD  L  +ADNYP+LE+LNLTRC+KLTD GLQ++LLKCS LQSLNLYALSSFT
Sbjct: 170 LSGCKNITDKSLQLIADNYPDLELLNLTRCIKLTDGGLQQILLKCSSLQSLNLYALSSFT 229

Query: 375 DEAYKKIASLSHLKFLDLCGAQNLSDHGLSCIAECNNLVHLNLTWCVRVTDVGVIAVAEG 554
           DEAYKKI+ L+ L+FLDLCGAQNLSD GL CIA+C NLV LNLTWCVRVTDVGVIA+A+G
Sbjct: 230 DEAYKKISLLTDLRFLDLCGAQNLSDQGLCCIAKCKNLVSLNLTWCVRVTDVGVIAIAQG 289

Query: 555 CTSLEFLSLFGIVGVTDKCLEAFSRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPH 722
           CTSLEFLSLFGIVGVTDKCLEA SR CSN + TLDVNGCIGIK RSRDELLQ FP+
Sbjct: 290 CTSLEFLSLFGIVGVTDKCLEALSRSCSNMITTLDVNGCIGIKGRSRDELLQYFPY 345


>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score =  383 bits (984), Expect = e-104
 Identities = 182/236 (77%), Positives = 210/236 (88%)
 Frame = +3

Query: 15  LRGLELLNLNVCQKISDKGIEAITSASPNLNILSIYWNVRVTDVGVKQITENCRHLLDLN 194
           L+ LE LNLN CQKISDKGIEAITSA PNL + SIYWNVRVTDVG+KQ+ ENC+H++DLN
Sbjct: 108 LQNLESLNLNGCQKISDKGIEAITSACPNLKVFSIYWNVRVTDVGIKQLVENCKHIVDLN 167

Query: 195 LSGCKNITDTGLNAVADNYPELEVLNLTRCVKLTDEGLQRVLLKCSCLQSLNLYALSSFT 374
           LSGCKNI+D  L  VAD Y ++E+L+LTRC+KLTD+GLQ++L KCS L+SLNLYALS+FT
Sbjct: 168 LSGCKNISDKSLQLVADLYQDIELLDLTRCIKLTDDGLQQILSKCSSLKSLNLYALSTFT 227

Query: 375 DEAYKKIASLSHLKFLDLCGAQNLSDHGLSCIAECNNLVHLNLTWCVRVTDVGVIAVAEG 554
           D+AY+ I++L+HL+ LDLCGAQNLSD GLSCIA+C NL  LNLTWCVRVT+ GVIA+AEG
Sbjct: 228 DKAYRNISNLAHLRILDLCGAQNLSDEGLSCIAKCKNLTSLNLTWCVRVTNAGVIAIAEG 287

Query: 555 CTSLEFLSLFGIVGVTDKCLEAFSRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPH 722
           CT LEFLSLFGIVGVTDKCLEA SR CSNT+ TLDVNGCIGIKRRSRDELLQLFPH
Sbjct: 288 CTYLEFLSLFGIVGVTDKCLEALSRSCSNTITTLDVNGCIGIKRRSRDELLQLFPH 343


>ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  383 bits (984), Expect = e-104
 Identities = 185/235 (78%), Positives = 206/235 (87%)
 Frame = +3

Query: 15  LRGLELLNLNVCQKISDKGIEAITSASPNLNILSIYWNVRVTDVGVKQITENCRHLLDLN 194
           L+ LE LNLN CQKISDKGIEAITS    L + SIYWNVRVTD+G+K + ENC+ ++DLN
Sbjct: 98  LQKLESLNLNGCQKISDKGIEAITSTCSKLKVFSIYWNVRVTDIGIKHVVENCKQIVDLN 157

Query: 195 LSGCKNITDTGLNAVADNYPELEVLNLTRCVKLTDEGLQRVLLKCSCLQSLNLYALSSFT 374
           LSGCKNI+D  L  +A+NY ELE LNLTRC+KLTD GLQ++L KCS LQSLNLYALSSFT
Sbjct: 158 LSGCKNISDKALQLIAENYQELESLNLTRCIKLTDGGLQQILSKCSSLQSLNLYALSSFT 217

Query: 375 DEAYKKIASLSHLKFLDLCGAQNLSDHGLSCIAECNNLVHLNLTWCVRVTDVGVIAVAEG 554
           D+AYKKI+SLS LKFLDLCGAQNLSD GLSCIA+C N+V LNLTWCVRVTDVG +A+AEG
Sbjct: 218 DKAYKKISSLSLLKFLDLCGAQNLSDEGLSCIAKCKNIVSLNLTWCVRVTDVGAVAIAEG 277

Query: 555 CTSLEFLSLFGIVGVTDKCLEAFSRFCSNTLMTLDVNGCIGIKRRSRDELLQLFP 719
           CTSLEFLSLFGIVGVTDKCLE  SRFCSNT+ TLDVNGCIGIKRRSRDELLQLFP
Sbjct: 278 CTSLEFLSLFGIVGVTDKCLEVLSRFCSNTVTTLDVNGCIGIKRRSRDELLQLFP 332


>emb|CBI29975.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  365 bits (936), Expect = 7e-99
 Identities = 173/223 (77%), Positives = 197/223 (88%)
 Frame = +3

Query: 15  LRGLELLNLNVCQKISDKGIEAITSASPNLNILSIYWNVRVTDVGVKQITENCRHLLDLN 194
           L+ LE LNLNVCQKISD+G+E ITSA P L + SIYWNVRVTD+G+  + +NC+H++DLN
Sbjct: 110 LQELESLNLNVCQKISDRGVETITSACPKLKVFSIYWNVRVTDIGMTHLVKNCKHIVDLN 169

Query: 195 LSGCKNITDTGLNAVADNYPELEVLNLTRCVKLTDEGLQRVLLKCSCLQSLNLYALSSFT 374
           LSGCKNITD  L  +ADNYP+LE+LNLTRC+KLTD GLQ++LLKCS LQSLNLYALSSFT
Sbjct: 170 LSGCKNITDKSLQLIADNYPDLELLNLTRCIKLTDGGLQQILLKCSSLQSLNLYALSSFT 229

Query: 375 DEAYKKIASLSHLKFLDLCGAQNLSDHGLSCIAECNNLVHLNLTWCVRVTDVGVIAVAEG 554
           DEAYKKI+ L+ L+FLDLCGAQNLSD GL CIA+C NLV LNLTWCVRVTDVGVIA+A+G
Sbjct: 230 DEAYKKISLLTDLRFLDLCGAQNLSDQGLCCIAKCKNLVSLNLTWCVRVTDVGVIAIAQG 289

Query: 555 CTSLEFLSLFGIVGVTDKCLEAFSRFCSNTLMTLDVNGCIGIK 683
           CTSLEFLSLFGIVGVTDKCLEA SR CSN + TLDVNGCIGIK
Sbjct: 290 CTSLEFLSLFGIVGVTDKCLEALSRSCSNMITTLDVNGCIGIK 332


>ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max]
          Length = 353

 Score =  362 bits (928), Expect = 6e-98
 Identities = 175/236 (74%), Positives = 200/236 (84%)
 Frame = +3

Query: 15  LRGLELLNLNVCQKISDKGIEAITSASPNLNILSIYWNVRVTDVGVKQITENCRHLLDLN 194
           L+ LE LNLN CQKISD GIEAITS  P L   SIYWNVRVTD G++ I +NC+H++DLN
Sbjct: 110 LQSLESLNLNGCQKISDTGIEAITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLN 169

Query: 195 LSGCKNITDTGLNAVADNYPELEVLNLTRCVKLTDEGLQRVLLKCSCLQSLNLYALSSFT 374
           +SGCKNI+D G   VADNYPELE LNLTRC+KLTD+GL+ +L KC  LQSLNLYALSSFT
Sbjct: 170 ISGCKNISDQGAQLVADNYPELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNLYALSSFT 229

Query: 375 DEAYKKIASLSHLKFLDLCGAQNLSDHGLSCIAECNNLVHLNLTWCVRVTDVGVIAVAEG 554
           DEAY+KI  L+ LKFLDLCGAQNLSD  LSCI++C NL  LNLTWCVRVTD GVI++A+G
Sbjct: 230 DEAYRKICLLARLKFLDLCGAQNLSDEALSCISKCKNLESLNLTWCVRVTDEGVISIAKG 289

Query: 555 CTSLEFLSLFGIVGVTDKCLEAFSRFCSNTLMTLDVNGCIGIKRRSRDELLQLFPH 722
           CTSLEFLSLFGIVGVTDKCLE  S+ CSN + TLDVNGCIGIK+RSR+ELLQLFP+
Sbjct: 290 CTSLEFLSLFGIVGVTDKCLEELSKSCSNKITTLDVNGCIGIKKRSREELLQLFPY 345