BLASTX nr result

ID: Coptis25_contig00006084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006084
         (2835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associat...   311   6e-82
emb|CAN81116.1| hypothetical protein VITISV_001607 [Vitis vinifera]   306   2e-80
ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|2...   298   7e-78
gb|AFK47409.1| unknown [Lotus japonicus]                              296   3e-77
ref|XP_002310532.1| predicted protein [Populus trichocarpa] gi|2...   294   1e-76

>ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2
            [Vitis vinifera] gi|296081514|emb|CBI20037.3| unnamed
            protein product [Vitis vinifera]
          Length = 226

 Score =  311 bits (797), Expect = 6e-82
 Identities = 165/226 (73%), Positives = 190/226 (84%), Gaps = 3/226 (1%)
 Frame = -3

Query: 2761 MGNLFVKKAKITDVDKAILSLKTQRRKLAQYQHQLEAVIEAEKQAAKDLIREKRKDRALI 2582
            MGN+FVKK KITDVD+AILSLKTQRRKLAQYQ QL+AVIEAEKQAA+DLIREK+KDRAL+
Sbjct: 1    MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 2581 AXXXXXXXXXXXXQVDAWLINVEQQLTDIEVTSKQKAVFESLKAGNNAIKAIQGEINMDD 2402
            A            QVDAW+INVEQQL DIE+ SKQKAVF+SLKAGNNAIKAIQ EIN++D
Sbjct: 61   ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINLED 120

Query: 2401 VQKLMDDTEEARSYQDEINAILGEKLSAEDEEDVLAEFENLETELTLQDLPKVPAQSEP- 2225
            VQKLMDD+ EA++YQDEINAILGEKLSAEDEE++LAE ENLET++TLQDLP VPA   P 
Sbjct: 121  VQKLMDDSAEAKAYQDEINAILGEKLSAEDEEEILAELENLETQITLQDLPAVPAAVPPP 180

Query: 2224 -KDEELVLPDVPTKTPVVSEVVVEGAEDAKR-ISAQRKVMEEPLPA 2093
             ++E+L LPDVPTK PV  + V + AEDA   +S +RKVMEEPLPA
Sbjct: 181  EENEKLDLPDVPTKAPVAPQAVADEAEDASTGVSTRRKVMEEPLPA 226


>emb|CAN81116.1| hypothetical protein VITISV_001607 [Vitis vinifera]
          Length = 226

 Score =  306 bits (784), Expect = 2e-80
 Identities = 163/226 (72%), Positives = 188/226 (83%), Gaps = 3/226 (1%)
 Frame = -3

Query: 2761 MGNLFVKKAKITDVDKAILSLKTQRRKLAQYQHQLEAVIEAEKQAAKDLIREKRKDRALI 2582
            MGN+FVKK KITDVD+AILSLKTQRRKL Q Q QL+AVIEAEKQAA+DLIREK+KDRAL+
Sbjct: 1    MGNIFVKKPKITDVDRAILSLKTQRRKLGQCQQQLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 2581 AXXXXXXXXXXXXQVDAWLINVEQQLTDIEVTSKQKAVFESLKAGNNAIKAIQGEINMDD 2402
            A            QVDAW+INVEQQL DIE+ SKQKAVF+SLKAGNNAIKAIQ EIN++D
Sbjct: 61   ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINLED 120

Query: 2401 VQKLMDDTEEARSYQDEINAILGEKLSAEDEEDVLAEFENLETELTLQDLPKVPAQSEP- 2225
            VQKLMDD+ EA++YQDEINAILGEKLSAEDEE++LAE ENLET++TLQDLP VPA   P 
Sbjct: 121  VQKLMDDSAEAKAYQDEINAILGEKLSAEDEEEILAELENLETQITLQDLPAVPAAVPPP 180

Query: 2224 -KDEELVLPDVPTKTPVVSEVVVEGAEDAKR-ISAQRKVMEEPLPA 2093
             ++E+L LPDVPTK PV  + V + AEDA   +S +RKVMEEPLPA
Sbjct: 181  EENEKLDLPDVPTKAPVAPQAVADEAEDASTGVSTRRKVMEEPLPA 226


>ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|222856497|gb|EEE94044.1|
            predicted protein [Populus trichocarpa]
          Length = 222

 Score =  298 bits (762), Expect = 7e-78
 Identities = 160/226 (70%), Positives = 187/226 (82%), Gaps = 3/226 (1%)
 Frame = -3

Query: 2761 MGNLFVKKAKITDVDKAILSLKTQRRKLAQYQHQLEAVIEAEKQAAKDLIREKRKDRALI 2582
            MGN+FVKK KITDVD+AILSLKTQRRKLAQYQ QLEAVIEAEKQAAKDLIREKRKDRAL+
Sbjct: 1    MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAAKDLIREKRKDRALL 60

Query: 2581 AXXXXXXXXXXXXQVDAWLINVEQQLTDIEVTSKQKAVFESLKAGNNAIKAIQGEINMDD 2402
            A            QVD WLINVEQQL DIE+ SKQKAVFESLK+G +AIKAIQ E+N+DD
Sbjct: 61   ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDD 120

Query: 2401 VQKLMDDTEEARSYQDEINAILGEKLSAEDEEDVLAEFENLETELTLQDLPKVPAQ--SE 2228
            VQKLMDDT EA++YQDEINAILGEKLSAEDEE++LAEFENLE ++ +Q+ P+VP +  SE
Sbjct: 121  VQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFENLEAQMAVQEWPEVPTKVLSE 180

Query: 2227 PKDEELVLPDVPTKTPVVSEVVVEGAEDAK-RISAQRKVMEEPLPA 2093
             ++++L LPDVPTK P    V+V+ AE A   +S +RKV+EEPLPA
Sbjct: 181  EQEQKLDLPDVPTKPP----VLVDDAETASAEVSTRRKVLEEPLPA 222


>gb|AFK47409.1| unknown [Lotus japonicus]
          Length = 215

 Score =  296 bits (757), Expect = 3e-77
 Identities = 156/224 (69%), Positives = 186/224 (83%), Gaps = 1/224 (0%)
 Frame = -3

Query: 2761 MGNLFVKKAKITDVDKAILSLKTQRRKLAQYQHQLEAVIEAEKQAAKDLIREKRKDRALI 2582
            MGN+FVKK K+TDVD+AIL+LKTQRRKLAQYQ +L+AVIEAEKQAA+DLIREK+KDRAL+
Sbjct: 1    MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 2581 AXXXXXXXXXXXXQVDAWLINVEQQLTDIEVTSKQKAVFESLKAGNNAIKAIQGEINMDD 2402
            A            QVDAWL+NVEQQL DIE+ SKQKAVF+SLKAGN+A+KAIQ EIN++D
Sbjct: 61   ALKKKKAQEELLKQVDAWLLNVEQQLADIELASKQKAVFDSLKAGNDAMKAIQSEINIED 120

Query: 2401 VQKLMDDTEEARSYQDEINAILGEKLSAEDEEDVLAEFENLETELTLQDLPKVPAQ-SEP 2225
            VQKLMDDTEEA++YQDEI+AILGEKLSAEDEE++LAEF+NLET+LT++DLP+VPA  SE 
Sbjct: 121  VQKLMDDTEEAKAYQDEISAILGEKLSAEDEEEILAEFDNLETQLTVEDLPEVPASVSEE 180

Query: 2224 KDEELVLPDVPTKTPVVSEVVVEGAEDAKRISAQRKVMEEPLPA 2093
             DE+L LPDVPTK P  S         +  +S +RKVMEEPL A
Sbjct: 181  TDEKLDLPDVPTKAPATS---------SAEVSTKRKVMEEPLAA 215


>ref|XP_002310532.1| predicted protein [Populus trichocarpa] gi|222853435|gb|EEE90982.1|
            predicted protein [Populus trichocarpa]
          Length = 222

 Score =  294 bits (752), Expect = 1e-76
 Identities = 159/226 (70%), Positives = 184/226 (81%), Gaps = 3/226 (1%)
 Frame = -3

Query: 2761 MGNLFVKKAKITDVDKAILSLKTQRRKLAQYQHQLEAVIEAEKQAAKDLIREKRKDRALI 2582
            MGNLFVKK KITDVD+AILSLKTQRRKLAQYQ QLE VIEAEK AAKDLIREKRKDRAL+
Sbjct: 1    MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLETVIEAEKLAAKDLIREKRKDRALL 60

Query: 2581 AXXXXXXXXXXXXQVDAWLINVEQQLTDIEVTSKQKAVFESLKAGNNAIKAIQGEINMDD 2402
            A            QVD WLINVEQQL DIE+ SKQKAVFESLK+G +AIKAIQ E+N+DD
Sbjct: 61   ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDD 120

Query: 2401 VQKLMDDTEEARSYQDEINAILGEKLSAEDEEDVLAEFENLETELTLQDLPKVP--AQSE 2228
            VQKLMDDT EA++YQDEINAILGEKLSAEDEE++LAEFE+LET++ +QDLP+VP    SE
Sbjct: 121  VQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFEDLETQVAVQDLPEVPTIVVSE 180

Query: 2227 PKDEELVLPDVPTKTPV-VSEVVVEGAEDAKRISAQRKVMEEPLPA 2093
             ++++L LPDVPTK PV V +  +  AE    +  +RKV+EEPLPA
Sbjct: 181  EQEQKLDLPDVPTKPPVLVDDAEISSAE----VPTKRKVLEEPLPA 222


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