BLASTX nr result

ID: Coptis25_contig00005887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005887
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNI...   238   1e-60
emb|CAN73936.1| hypothetical protein VITISV_026282 [Vitis vinifera]   238   1e-60
ref|XP_002454764.1| hypothetical protein SORBIDRAFT_04g036910 [S...   236   3e-60
gb|ADX60168.1| LUG transcription factor [Zea mays] gi|413939440|...   235   8e-60
ref|NP_001151541.1| LOC100285175 [Zea mays] gi|195647552|gb|ACG4...   235   8e-60

>ref|XP_002266172.1| PREDICTED: transcriptional corepressor LEUNIG [Vitis vinifera]
           gi|297744346|emb|CBI37316.3| unnamed protein product
           [Vitis vinifera]
          Length = 779

 Score =  238 bits (607), Expect = 1e-60
 Identities = 134/239 (56%), Positives = 153/239 (64%), Gaps = 8/239 (3%)
 Frame = +3

Query: 51  LQRRDGNHPSIGGPGNAINAEGMIGGSTASVLAAKMYGEHMKHLHSMESEASPQLMDASR 230
           LQRRD NHP +GG  NAIN+EGM+G S+ASVLA KMY E MKH HSM+SE SP L+DA+R
Sbjct: 110 LQRRDPNHPPLGGSMNAINSEGMMGQSSASVLAMKMYEERMKHPHSMDSETSPALIDANR 169

Query: 231 MALLKSATNHPGQLVQGNPGSVSTALQQIQARTQPATDIKTEVNMSVTQRSLPMDPSTIY 410
           MALLKSATNH  QLVQGN GS+S ALQQIQARTQ   DIK EVN+  TQ+SLPMDPS   
Sbjct: 170 MALLKSATNHQSQLVQGNSGSMSAALQQIQARTQLTPDIKGEVNLGATQKSLPMDPSIYG 229

Query: 411 GQVMQSKSGMVSAGLNQGVGGLPLKGWPLTGI--------XXXXXXXXXXXXXXXXXXXX 566
             ++QSKSG+  AGLNQGV GLPLKGWPLTGI                            
Sbjct: 230 PAILQSKSGLGGAGLNQGVTGLPLKGWPLTGIEQLRPSLGVQVQKPNIPTQNQFILASQQ 289

Query: 567 XXXXXXXXXXXXXXXXXXXADMDPQRFRVLRRGNINTKDGQSTGNEGFIGSPMQSSSLK 743
                               DMDP+R   + RG++NTKDGQS  N+G I SP+QSSS K
Sbjct: 290 QQVLAHAQAQSNLGNSPNYGDMDPRRLCGIPRGSLNTKDGQSARNDGSICSPVQSSSPK 348


>emb|CAN73936.1| hypothetical protein VITISV_026282 [Vitis vinifera]
          Length = 774

 Score =  238 bits (607), Expect = 1e-60
 Identities = 134/239 (56%), Positives = 153/239 (64%), Gaps = 8/239 (3%)
 Frame = +3

Query: 51  LQRRDGNHPSIGGPGNAINAEGMIGGSTASVLAAKMYGEHMKHLHSMESEASPQLMDASR 230
           LQRRD NHP +GG  NAIN+EGM+G S+ASVLA KMY E MKH HSM+SE SP L+DA+R
Sbjct: 105 LQRRDPNHPPLGGSMNAINSEGMMGQSSASVLAMKMYEERMKHPHSMDSETSPALIDANR 164

Query: 231 MALLKSATNHPGQLVQGNPGSVSTALQQIQARTQPATDIKTEVNMSVTQRSLPMDPSTIY 410
           MALLKSATNH  QLVQGN GS+S ALQQIQARTQ   DIK EVN+  TQ+SLPMDPS   
Sbjct: 165 MALLKSATNHQSQLVQGNSGSMSAALQQIQARTQLTPDIKGEVNLGATQKSLPMDPSIYG 224

Query: 411 GQVMQSKSGMVSAGLNQGVGGLPLKGWPLTGI--------XXXXXXXXXXXXXXXXXXXX 566
             ++QSKSG+  AGLNQGV GLPLKGWPLTGI                            
Sbjct: 225 PAILQSKSGLGGAGLNQGVTGLPLKGWPLTGIEQLRPSLGVQVQKPNIPTQNQFILASQQ 284

Query: 567 XXXXXXXXXXXXXXXXXXXADMDPQRFRVLRRGNINTKDGQSTGNEGFIGSPMQSSSLK 743
                               DMDP+R   + RG++NTKDGQS  N+G I SP+QSSS K
Sbjct: 285 QQVLAHAQAQSNLGNSPNYGDMDPRRLCGIPRGSLNTKDGQSARNDGSICSPVQSSSPK 343


>ref|XP_002454764.1| hypothetical protein SORBIDRAFT_04g036910 [Sorghum bicolor]
           gi|241934595|gb|EES07740.1| hypothetical protein
           SORBIDRAFT_04g036910 [Sorghum bicolor]
          Length = 803

 Score =  236 bits (603), Expect = 3e-60
 Identities = 133/245 (54%), Positives = 154/245 (62%), Gaps = 11/245 (4%)
 Frame = +3

Query: 42  HHALQRRDGNHPSIGGPGNAINAEGMIGGSTASVLAAKMYGEHMKHLHSMESEASPQLMD 221
           H  LQR + NHPS+ GP NA+N++G++G STASVLAAKMY E +KH HSMESE S QL++
Sbjct: 105 HAQLQRTNANHPSLNGPINALNSDGILGPSTASVLAAKMYEERLKHPHSMESEGS-QLIE 163

Query: 222 ASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQPATDIKTEVNMSVTQRSLPMDPS 401
           ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q   DIK+E NM V QRSLPMDPS
Sbjct: 164 ASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNMGVPQRSLPMDPS 223

Query: 402 TIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGI----------XXXXXXXXXXXXXX 548
           ++YGQ ++Q K G+  AGLNQGV GLPLKGWPLTGI                        
Sbjct: 224 SLYGQGIIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQKPFLSTQSQFQL 283

Query: 549 XXXXXXXXXXXXXXXXXXXXXXXXXADMDPQRFRVLRRGNINTKDGQSTGNEGFIGSPMQ 728
                                     D+DP+R   L RG +N KDGQ  G +G I SPMQ
Sbjct: 284 MSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGGLNGKDGQPAGTDGCISSPMQ 343

Query: 729 SSSLK 743
           SSS K
Sbjct: 344 SSSPK 348


>gb|ADX60168.1| LUG transcription factor [Zea mays] gi|413939440|gb|AFW73991.1|
           transcriptional corepressor LEUNIG [Zea mays]
          Length = 799

 Score =  235 bits (599), Expect = 8e-60
 Identities = 133/245 (54%), Positives = 154/245 (62%), Gaps = 11/245 (4%)
 Frame = +3

Query: 42  HHALQRRDGNHPSIGGPGNAINAEGMIGGSTASVLAAKMYGEHMKHLHSMESEASPQLMD 221
           H  LQR + NHPS+ GP NA+N+EG++G STASVLAAKMY E +KH HSMESE S QL++
Sbjct: 105 HAQLQRTNANHPSLNGPINALNSEGILGPSTASVLAAKMYEERLKHPHSMESEGS-QLIE 163

Query: 222 ASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQPATDIKTEVNMSVTQRSLPMDPS 401
           ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q   DIK+E NM V QRSLPMDPS
Sbjct: 164 ASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNMGVPQRSLPMDPS 223

Query: 402 TIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGI----------XXXXXXXXXXXXXX 548
           ++YGQ ++Q K G+  AGLNQGV GLPLKGWPLTGI                        
Sbjct: 224 SLYGQGLIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQKPFLSTQSQFQL 283

Query: 549 XXXXXXXXXXXXXXXXXXXXXXXXXADMDPQRFRVLRRGNINTKDGQSTGNEGFIGSPMQ 728
                                     D+DP+R   L RG++N KD Q  G +G I SPMQ
Sbjct: 284 MSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGSLNGKDSQPAGTDGCISSPMQ 343

Query: 729 SSSLK 743
           SSS K
Sbjct: 344 SSSPK 348


>ref|NP_001151541.1| LOC100285175 [Zea mays] gi|195647552|gb|ACG43244.1| transcriptional
           corepressor LEUNIG [Zea mays]
          Length = 799

 Score =  235 bits (599), Expect = 8e-60
 Identities = 133/245 (54%), Positives = 154/245 (62%), Gaps = 11/245 (4%)
 Frame = +3

Query: 42  HHALQRRDGNHPSIGGPGNAINAEGMIGGSTASVLAAKMYGEHMKHLHSMESEASPQLMD 221
           H  LQR + NHPS+ GP NA+N+EG++G STASVLAAKMY E +KH HSMESE S QL++
Sbjct: 105 HAQLQRTNANHPSLNGPINALNSEGILGPSTASVLAAKMYEERLKHPHSMESEGS-QLIE 163

Query: 222 ASRMALLKSATNHPGQLVQGNPGSVSTALQQIQARTQPATDIKTEVNMSVTQRSLPMDPS 401
           ASRMALLKSATNH GQLV G PG+VST LQQIQAR Q   DIK+E NM V QRSLPMDPS
Sbjct: 164 ASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNMGVPQRSLPMDPS 223

Query: 402 TIYGQ-VMQSKSGMVSAGLNQGVGGLPLKGWPLTGI----------XXXXXXXXXXXXXX 548
           ++YGQ ++Q K G+  AGLNQGV GLPLKGWPLTGI                        
Sbjct: 224 SLYGQGLIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQKPFLSTQSQFQL 283

Query: 549 XXXXXXXXXXXXXXXXXXXXXXXXXADMDPQRFRVLRRGNINTKDGQSTGNEGFIGSPMQ 728
                                     D+DP+R   L RG++N KD Q  G +G I SPMQ
Sbjct: 284 MSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGSLNGKDSQPAGTDGCISSPMQ 343

Query: 729 SSSLK 743
           SSS K
Sbjct: 344 SSSPK 348


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