BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005731
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...   166   1e-38
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   164   4e-38
gb|ABR16298.1| unknown [Picea sitchensis]                             164   5e-38
emb|CBI31778.3| unnamed protein product [Vitis vinifera]              163   7e-38
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   163   7e-38

>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 802

 Score =  166 bits (420), Expect = 1e-38
 Identities = 98/235 (41%), Positives = 138/235 (58%)
 Frame = -1

Query: 1082 LEISKLGLSNDLEASLTSGLKKRNGSEVTRIHINHLKPIQSVVFTPAMEGRHIIAQASEG 903
            LEI+KLG+S D+     S L+K+         I  L PIQ  V  PAM+GR +I +A  G
Sbjct: 80   LEIAKLGISQDI----VSALEKKG--------ITKLFPIQRAVLEPAMQGRDMIGRARTG 127

Query: 902  AGKTLAYGIPIINKISKLIYENRLNDRPPRQVNPLALVLSPNRRLALNVRKVFHQAAREL 723
             GKTLA+GIPI++KI +       N +  R  +PLALVL+P R LA  V K F++AA  L
Sbjct: 128  TGKTLAFGIPIMDKIIQF------NAKHGRGKDPLALVLAPTRELAKQVEKEFYEAAPNL 181

Query: 722  RTVCVDGDRHLGVYVDHYWHMCIETCLHNGCDIVVGSPGRVAEVLEEKQLSLSEVKFVVL 543
             T+CV G   +   +           L  G DI VG+PGR+ ++L    L+L EV+FV+L
Sbjct: 182  DTICVYGGTPISQQMRQ---------LDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVIL 232

Query: 542  DDVDRMDDEGSDKEVEDILNSVPPEAQTMIFGASLPKWISRLKEKHLKNPLEVSI 378
            D+ D+M   G  ++VE IL  +P E QT++F A++P WI +L   +LKNPL + +
Sbjct: 233  DEADQMLQVGFQEDVEKILERLPAERQTLMFSATMPTWIKQLTRNYLKNPLTIDL 287


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  164 bits (415), Expect = 4e-38
 Identities = 95/235 (40%), Positives = 142/235 (60%)
 Frame = -1

Query: 1082 LEISKLGLSNDLEASLTSGLKKRNGSEVTRIHINHLKPIQSVVFTPAMEGRHIIAQASEG 903
            LEISKLG++ ++ ++L +              I  L PIQ  V  PAM+GR +I +A  G
Sbjct: 115  LEISKLGIAQEIVSALANK------------GITKLFPIQRAVLEPAMQGRDMIGRARTG 162

Query: 902  AGKTLAYGIPIINKISKLIYENRLNDRPPRQVNPLALVLSPNRRLALNVRKVFHQAAREL 723
             GKTLA+GIPI++K+ +       N +  R  NPLALVL+P R LA  V K F ++A  L
Sbjct: 163  TGKTLAFGIPIMDKVIQY------NAKHGRGRNPLALVLAPTRELARQVEKEFXESAPNL 216

Query: 722  RTVCVDGDRHLGVYVDHYWHMCIETCLHNGCDIVVGSPGRVAEVLEEKQLSLSEVKFVVL 543
             T+CV G   +   ++          L  G D+VVG+PGR+ ++++   L+LSEV+FVVL
Sbjct: 217  DTLCVYGGTPISRQMNS---------LDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVL 267

Query: 542  DDVDRMDDEGSDKEVEDILNSVPPEAQTMIFGASLPKWISRLKEKHLKNPLEVSI 378
            D+ D+M   G +++VE IL  +P   Q+M+F A++P WI +L +K+LKNPL + +
Sbjct: 268  DEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDL 322


>gb|ABR16298.1| unknown [Picea sitchensis]
          Length = 802

 Score =  164 bits (414), Expect = 5e-38
 Identities = 96/236 (40%), Positives = 141/236 (59%), Gaps = 1/236 (0%)
 Frame = -1

Query: 1082 LEISKLGLSNDLEASLTSGLKKRNGSEVTRIHINHLKPIQSVVFTPAMEGRHIIAQASEG 903
            L++S L LS +L  +L +              I HL PIQ  V  PA+EGR +I +A  G
Sbjct: 144  LDLSGLNLSQELVEALANR------------GITHLFPIQRAVLVPALEGRDLIGRAKTG 191

Query: 902  AGKTLAYGIPIINKISKLIYENRLNDRPPRQVNPLALVLSPNRRLALNVRKVFHQAAREL 723
             GKTLA+GIPII +++K   EN+L  +  R   P  LVL+P R LA  V K F ++A  L
Sbjct: 192  TGKTLAFGIPIIERLTKDNKENKLLRQSRRL--PRVLVLAPTRELAKQVEKEFKESAPFL 249

Query: 722  RTVCVDGDRHLGV-YVDHYWHMCIETCLHNGCDIVVGSPGRVAEVLEEKQLSLSEVKFVV 546
             T C+ G    GV YV        +  L  G D+VVG+PGR+ +++  K L L+EV+F+V
Sbjct: 250  STACIYG----GVSYVSQ------QNALARGVDVVVGTPGRIIDLVNSKSLKLNEVQFLV 299

Query: 545  LDDVDRMDDEGSDKEVEDILNSVPPEAQTMIFGASLPKWISRLKEKHLKNPLEVSI 378
            LD+ D+M   G +++VE IL+++P E Q+M+F A++P W+ +L  KHL NP+ + +
Sbjct: 300  LDEADQMLAVGFEEDVEIILDNLPAERQSMLFSATMPGWVKKLSRKHLNNPMTIDL 355


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  163 bits (413), Expect = 7e-38
 Identities = 95/235 (40%), Positives = 142/235 (60%)
 Frame = -1

Query: 1082 LEISKLGLSNDLEASLTSGLKKRNGSEVTRIHINHLKPIQSVVFTPAMEGRHIIAQASEG 903
            LEISKLG++ ++ ++L +              I  L PIQ  V  PAM+GR +I +A  G
Sbjct: 115  LEISKLGIAQEIVSALANK------------GITKLFPIQRAVLEPAMQGRDMIGRARTG 162

Query: 902  AGKTLAYGIPIINKISKLIYENRLNDRPPRQVNPLALVLSPNRRLALNVRKVFHQAAREL 723
             GKTLA+GIPI++K+ +       N +  R  NPLALVL+P R LA  V K F ++A  L
Sbjct: 163  TGKTLAFGIPIMDKVIQY------NAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNL 216

Query: 722  RTVCVDGDRHLGVYVDHYWHMCIETCLHNGCDIVVGSPGRVAEVLEEKQLSLSEVKFVVL 543
             T+CV G   +   ++          L  G D+VVG+PGR+ ++++   L+LSEV+FVVL
Sbjct: 217  DTLCVYGGTPISRQMNS---------LDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVL 267

Query: 542  DDVDRMDDEGSDKEVEDILNSVPPEAQTMIFGASLPKWISRLKEKHLKNPLEVSI 378
            D+ D+M   G +++VE IL  +P   Q+M+F A++P WI +L +K+LKNPL + +
Sbjct: 268  DEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDL 322


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
            vinifera]
          Length = 666

 Score =  163 bits (413), Expect = 7e-38
 Identities = 95/235 (40%), Positives = 142/235 (60%)
 Frame = -1

Query: 1082 LEISKLGLSNDLEASLTSGLKKRNGSEVTRIHINHLKPIQSVVFTPAMEGRHIIAQASEG 903
            LEISKLG++ ++ ++L +              I  L PIQ  V  PAM+GR +I +A  G
Sbjct: 115  LEISKLGIAQEIVSALANK------------GITKLFPIQRAVLEPAMQGRDMIGRARTG 162

Query: 902  AGKTLAYGIPIINKISKLIYENRLNDRPPRQVNPLALVLSPNRRLALNVRKVFHQAAREL 723
             GKTLA+GIPI++K+ +       N +  R  NPLALVL+P R LA  V K F ++A  L
Sbjct: 163  TGKTLAFGIPIMDKVIQY------NAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNL 216

Query: 722  RTVCVDGDRHLGVYVDHYWHMCIETCLHNGCDIVVGSPGRVAEVLEEKQLSLSEVKFVVL 543
             T+CV G   +   ++          L  G D+VVG+PGR+ ++++   L+LSEV+FVVL
Sbjct: 217  DTLCVYGGTPISRQMNS---------LDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVL 267

Query: 542  DDVDRMDDEGSDKEVEDILNSVPPEAQTMIFGASLPKWISRLKEKHLKNPLEVSI 378
            D+ D+M   G +++VE IL  +P   Q+M+F A++P WI +L +K+LKNPL + +
Sbjct: 268  DEADQMLAVGFEEDVEMILEKLPQNRQSMMFSATMPSWIRKLTQKYLKNPLTIDL 322