BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005240
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX94814.1| transposon protein, putative, CACTA, En/Spm sub-c...    39   6e-06

>gb|AAX94814.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group] gi|77550380|gb|ABA93177.1| transposon
            protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1154

 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 20/76 (26%), Positives = 41/76 (53%)
 Frame = -2

Query: 424  ARWNTRDGSLIRARIPISYIDWRLVHPDFKDKVWNALMREFEVTNVDQTLVRSYAEKKLL 245
            A+++++ G ++R +IPI+  DW  V    K+ +W  L + F+  +  +  V +YA + + 
Sbjct: 780  AKFSSQCGIIVREKIPITVKDWDHVSNGDKEVLWKELKKIFQFPDGSEAAVSNYALQTMA 839

Query: 244  Y*V*IWKIGLEKIYIE 197
                 WK  L K +++
Sbjct: 840  KSWRGWKTTLNKKFVK 855



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 156 AGIDPNHWEQFVLYENTPEVMARNANNGENIKPNDSRHALG 34
           A I PN W+ F+  +N+PE + R+    E  K N   H LG
Sbjct: 865 ANITPNQWDDFLTLKNSPEEIQRSQKYAELAKKNKFPHRLG 905