BLASTX nr result

ID: Coptis25_contig00004961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004961
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277809.1| PREDICTED: tetratricopeptide repeat protein ...   164   7e-39
gb|AFX67010.1| O-linked GlcNAc transferase [Solanum tuberosum]        157   1e-36
ref|XP_003521742.1| PREDICTED: tetratricopeptide repeat protein ...   155   3e-36
gb|ACU19211.1| unknown [Glycine max]                                  155   3e-36
ref|NP_001242375.1| uncharacterized protein LOC100796542 [Glycin...   153   2e-35

>ref|XP_002277809.1| PREDICTED: tetratricopeptide repeat protein 35 [Vitis vinifera]
           gi|298204889|emb|CBI34196.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/84 (91%), Positives = 79/84 (94%)
 Frame = -3

Query: 253 NRLENQVDNGGGGVWEYLCLVSKLKIRRSDKVLKHGLSILNDPKKRSKLGPEEWTLYEQV 74
           NRLE QVDNGGGG WEYLCLV KLK+RRSDKVLKHGLSILNDPKKRS LGPEEWTLYEQV
Sbjct: 11  NRLEIQVDNGGGGAWEYLCLVRKLKVRRSDKVLKHGLSILNDPKKRSNLGPEEWTLYEQV 70

Query: 73  AVAAMDCQCLDVAKDCIKALQKKF 2
           AVAAMDCQCLDVAKDCIK LQK+F
Sbjct: 71  AVAAMDCQCLDVAKDCIKVLQKRF 94


>gb|AFX67010.1| O-linked GlcNAc transferase [Solanum tuberosum]
          Length = 300

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/84 (88%), Positives = 78/84 (92%)
 Frame = -3

Query: 253 NRLENQVDNGGGGVWEYLCLVSKLKIRRSDKVLKHGLSILNDPKKRSKLGPEEWTLYEQV 74
           NRLENQV+NGGGGVWEYLCLV KLK+RRSD VLKHGLSILND KKRS LGPEEWTLYEQV
Sbjct: 11  NRLENQVENGGGGVWEYLCLVHKLKLRRSDMVLKHGLSILNDSKKRSALGPEEWTLYEQV 70

Query: 73  AVAAMDCQCLDVAKDCIKALQKKF 2
           AVAAMDCQ +DVAKDCIK LQ+KF
Sbjct: 71  AVAAMDCQSIDVAKDCIKVLQRKF 94


>ref|XP_003521742.1| PREDICTED: tetratricopeptide repeat protein 35-A-like [Glycine max]
          Length = 302

 Score =  155 bits (393), Expect = 3e-36
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 NRLENQVDNGGGGVWEYLCLVSKLKIRRSDKVLKHGLSILNDPKKRSKLGPEEWTLYEQV 74
           +RLENQVDNGGGG WEYLCLV KLK+RRS+KVLKHGLSILNDPK RS LG +EWTLYEQV
Sbjct: 11  SRLENQVDNGGGGAWEYLCLVRKLKVRRSEKVLKHGLSILNDPKHRSSLGSDEWTLYEQV 70

Query: 73  AVAAMDCQCLDVAKDCIKALQKKF 2
           AVAAMDCQCLDVAKDC K LQK+F
Sbjct: 71  AVAAMDCQCLDVAKDCTKVLQKRF 94


>gb|ACU19211.1| unknown [Glycine max]
          Length = 302

 Score =  155 bits (393), Expect = 3e-36
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 NRLENQVDNGGGGVWEYLCLVSKLKIRRSDKVLKHGLSILNDPKKRSKLGPEEWTLYEQV 74
           +RLENQVDNGGGG WEYLCLV KLK+RRS+KVLKHGLSILNDPK RS LG +EWTLYEQV
Sbjct: 11  SRLENQVDNGGGGAWEYLCLVRKLKVRRSEKVLKHGLSILNDPKHRSSLGSDEWTLYEQV 70

Query: 73  AVAAMDCQCLDVAKDCIKALQKKF 2
           AVAAMDCQCLDVAKDC K LQK+F
Sbjct: 71  AVAAMDCQCLDVAKDCTKVLQKRF 94


>ref|NP_001242375.1| uncharacterized protein LOC100796542 [Glycine max]
           gi|255645329|gb|ACU23161.1| unknown [Glycine max]
          Length = 302

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/84 (84%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 NRLENQVDNGGGGVWEYLCLVSKLKIRRSDKVLKHGLSILNDPKKRSKLGPEEWTLYEQV 74
           NRLENQVDNGGGG WEYLCLV KLK+RRS+KVLKHGLSILND K+RS LG +EWTLYEQV
Sbjct: 11  NRLENQVDNGGGGAWEYLCLVRKLKVRRSEKVLKHGLSILNDLKQRSSLGSDEWTLYEQV 70

Query: 73  AVAAMDCQCLDVAKDCIKALQKKF 2
           AVAAMDCQCLDVAKDC K L+K+F
Sbjct: 71  AVAAMDCQCLDVAKDCTKVLRKRF 94


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