BLASTX nr result
ID: Coptis25_contig00004950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00004950
(1648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|2... 240 7e-61
ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycin... 235 3e-59
ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261... 234 5e-59
ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Gly... 234 7e-59
emb|CAN66858.1| hypothetical protein VITISV_029168 [Vitis vinifera] 233 9e-59
>ref|XP_002325083.1| predicted protein [Populus trichocarpa] gi|222866517|gb|EEF03648.1|
predicted protein [Populus trichocarpa]
Length = 399
Score = 240 bits (613), Expect = 7e-61
Identities = 132/245 (53%), Positives = 165/245 (67%), Gaps = 2/245 (0%)
Frame = +2
Query: 620 MGVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTVLLCFCTXXXXXXXXXXXX 799
MGVFATRSPHRPCPIGLT+AKVEAVQGNMVLLSGVDLVDGT
Sbjct: 182 MGVFATRSPHRPCPIGLTVAKVEAVQGNMVLLSGVDLVDGT------------------- 222
Query: 800 XXXXXXXXXXPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWV 979
P+LDIKPYLPYC+SI+ A+VP WV D++LAVASV FS F SSL+DCW
Sbjct: 223 ----------PILDIKPYLPYCDSIQGAAVPEWVMVDNMLAVASVNFSEGFSSSLSDCWE 272
Query: 980 TAEKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKD- 1156
TA+K SLYAS DE+Q L KQVLSWDIRS+SQR +PH+ +++T N + D ++D
Sbjct: 273 TAKKKSLYASPDELQCLIKQVLSWDIRSISQRNQPHDPLIKTGNGEAPHSALDSNQNQDQ 332
Query: 1157 EILPHENAQSSVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLR-RQHSCSS 1333
E +EN+Q PS DVTY+L+LE D+SY+I+ +GNV+V ++S + L Q+ S
Sbjct: 333 EASDNENSQVCHPSG-DVTYHLILEGMDVSYRIDFNGNVIVENVVVSPDILNGNQNRSSF 391
Query: 1334 TMWTE 1348
MW +
Sbjct: 392 LMWRD 396
Score = 164 bits (416), Expect = 5e-38
Identities = 80/121 (66%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = +3
Query: 114 SLKASIAKCTAERKGRTRAQQALRKSLTQSNSDS-KKTSYPMTPIAIVESCFRTRYGTPR 290
SL + + K AER+GR RAQQ LRK+L Q S++ ++ SYPMTPI +V+SCF TR GTPR
Sbjct: 52 SLNSCMQKSAAERQGRIRAQQDLRKTLAQPKSENLEQASYPMTPIGVVQSCFSTRNGTPR 111
Query: 291 QPLLVPLARACLVFDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAK 470
QPLLVPLARACLVFD++ PPA+LEGL EYSHCWIIYVFHLNT++ K WK S+ KAK
Sbjct: 112 QPLLVPLARACLVFDSARVPPASLEGLVEYSHCWIIYVFHLNTDLVKLWKHPSRSKFKAK 171
Query: 471 V 473
V
Sbjct: 172 V 172
>ref|NP_001242602.1| uncharacterized protein LOC100812211 [Glycine max]
gi|255642295|gb|ACU21412.1| unknown [Glycine max]
Length = 394
Score = 235 bits (599), Expect = 3e-59
Identities = 120/242 (49%), Positives = 158/242 (65%)
Frame = +2
Query: 623 GVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTVLLCFCTXXXXXXXXXXXXX 802
G+FATRSPHRPCPIGLT+AKVEAV GNM+LLSGVDLVDGT
Sbjct: 179 GLFATRSPHRPCPIGLTVAKVEAVLGNMILLSGVDLVDGT-------------------- 218
Query: 803 XXXXXXXXXPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVT 982
PVLDIKPYLPYC+SI++A+VP W+ +D+LL+VAS+ FS F S+L DCW+
Sbjct: 219 ---------PVLDIKPYLPYCDSIQEAAVPNWLMEDNLLSVASISFSDHFTSALEDCWIM 269
Query: 983 AEKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDEI 1162
AEK SLYAS E QSL KQVLSWDIRSLSQR RPH+ +L+ +N N SD+++ ++E
Sbjct: 270 AEKKSLYASTSEFQSLIKQVLSWDIRSLSQRNRPHDTLLKKENDELLGNTSDVDEHQEET 329
Query: 1163 LPHENAQSSVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSSTMW 1342
+ + +S ++ Y+L+LE D+SY+I+ DG V+V K S + + C+ W
Sbjct: 330 TLVREREQNALNSNEIIYHLILEGLDVSYRIDHDGYVIVEKISTSDVQDNKPNFCNYLTW 389
Query: 1343 TE 1348
+
Sbjct: 390 KD 391
Score = 176 bits (446), Expect = 2e-41
Identities = 90/160 (56%), Positives = 106/160 (66%), Gaps = 3/160 (1%)
Frame = +3
Query: 3 KWLKVTITLAVAAXXXXXXXXXXXXXXXXXXXXXXXXSLKASIAKCTAERKGRTRAQQAL 182
+WL V+IT+ V A SLK+ KC +ER+GR RAQ AL
Sbjct: 9 QWLTVSITVTVTAISISAYVLKRKWNHLNSKIEELEASLKSCSDKCASERQGRIRAQLAL 68
Query: 183 RKSLTQSNSDSKK---TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLVFDTSEAPP 353
RK +TQS S+ TSYPM PI +V SCF TR GTPRQPLLVPLARACLVF+T PP
Sbjct: 69 RKQVTQSQPKSQNLNLTSYPMIPIGVVHSCFSTRNGTPRQPLLVPLARACLVFNTMRVPP 128
Query: 354 AALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKV 473
A+LEGL+EYSHCWI+YVFHLNT+++K WK SK G KAKV
Sbjct: 129 ASLEGLAEYSHCWILYVFHLNTDLEKLWKHPSKSGFKAKV 168
>ref|XP_002278148.1| PREDICTED: uncharacterized protein LOC100261628 [Vitis vinifera]
gi|297735319|emb|CBI17759.3| unnamed protein product
[Vitis vinifera]
Length = 384
Score = 234 bits (597), Expect = 5e-59
Identities = 127/244 (52%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
Frame = +2
Query: 620 MGVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTVLLCFCTXXXXXXXXXXXX 799
MGVFATR+PHRP PIGLT+AKVEAV GNMVLLSGVDLVDGT
Sbjct: 168 MGVFATRTPHRPNPIGLTVAKVEAVHGNMVLLSGVDLVDGT------------------- 208
Query: 800 XXXXXXXXXXPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWV 979
PVLD+KPYLPYC+ ++ A++P WV+DD+LL VASV FS +F S+LA+CWV
Sbjct: 209 ----------PVLDVKPYLPYCDCVQGAALPKWVEDDNLLTVASVNFSDDFPSALAECWV 258
Query: 980 TAEKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDE 1159
AEK SLYAS +E+QSL KQVLSWDIRSLSQR RPHN + + + SDL+D + E
Sbjct: 259 IAEKKSLYASPNELQSLIKQVLSWDIRSLSQRDRPHNSLFSMGSSAAVDKTSDLDDWQAE 318
Query: 1160 ILPHENAQSSVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSS-T 1336
+ E+ ++P SED+ Y+L+LE D+SY+I+ +GNVLV K +SS+ + + S+
Sbjct: 319 EVKRESEPVALP-SEDIIYHLILEGLDVSYRIDCNGNVLVEKITLSSDIPKNNRNGSNYK 377
Query: 1337 MWTE 1348
+W++
Sbjct: 378 IWSD 381
Score = 179 bits (455), Expect = 1e-42
Identities = 85/121 (70%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
Frame = +3
Query: 114 SLKASIAKCTAERKGRTRAQQALRKSLTQSNSDSKK-TSYPMTPIAIVESCFRTRYGTPR 290
SLK+S+ KC AER+GR RAQQALRK++ Q SD+ + TSYPM PIAI++SCF TR GTPR
Sbjct: 38 SLKSSLEKCAAERQGRIRAQQALRKAIVQPKSDNMEMTSYPMRPIAIIQSCFSTRNGTPR 97
Query: 291 QPLLVPLARACLVFDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAK 470
QPLLVPLARACL+FD++ PPA+LEGL EYSHCWIIYVFHLNT+++K WK SK KAK
Sbjct: 98 QPLLVPLARACLIFDSARVPPASLEGLGEYSHCWIIYVFHLNTDLEKLWKDPSKSKFKAK 157
Query: 471 V 473
V
Sbjct: 158 V 158
>ref|XP_003549503.1| PREDICTED: UPF0066 protein HI_0510-like [Glycine max]
Length = 394
Score = 234 bits (596), Expect = 7e-59
Identities = 124/243 (51%), Positives = 163/243 (67%), Gaps = 1/243 (0%)
Frame = +2
Query: 623 GVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTVLLCFCTXXXXXXXXXXXXX 802
GVFATRSPHRPCPIGLT+AKVEAVQGNM+LLSGVDLVDGT
Sbjct: 179 GVFATRSPHRPCPIGLTVAKVEAVQGNMILLSGVDLVDGT-------------------- 218
Query: 803 XXXXXXXXXPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWVT 982
PVLDIKPYLPYC++I++A+VP W+ +D+LL+VASV FS F S+L + W+
Sbjct: 219 ---------PVLDIKPYLPYCDNIQEATVPNWLMEDNLLSVASVSFSEHFTSALKNIWIM 269
Query: 983 AEKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDE- 1159
EK SLYAS E+QSL KQVLSWDIRSLSQR RPH+ +L+ +N N +D+++ +DE
Sbjct: 270 VEKKSLYASPGELQSLIKQVLSWDIRSLSQRNRPHDTLLKKENDELLGNTADVDEHQDET 329
Query: 1160 ILPHENAQSSVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSSTM 1339
L HE Q+++ S+E + Y+L+LE D+SY+I+ DG V+V K S + + C+
Sbjct: 330 TLAHEREQNALNSNE-IIYHLILEGLDVSYRIDHDGYVIVEKISTSDVQDNKPNFCNYLT 388
Query: 1340 WTE 1348
W +
Sbjct: 389 WKD 391
Score = 182 bits (463), Expect = 2e-43
Identities = 93/160 (58%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Frame = +3
Query: 3 KWLKVTITLAVAAXXXXXXXXXXXXXXXXXXXXXXXXSLKASIAKCTAERKGRTRAQQAL 182
KWL V+ITL + A SLK+ C +ER+GR RAQQAL
Sbjct: 9 KWLTVSITLTLTAVSISAYVLKRKWNHLNSKIEELEASLKSFSDNCASERQGRIRAQQAL 68
Query: 183 RKSLTQSNSDSKK---TSYPMTPIAIVESCFRTRYGTPRQPLLVPLARACLVFDTSEAPP 353
RK +TQS +S+K TSYPM PI +V SCF TR GTPRQPLLVPLARACLVF+T+ PP
Sbjct: 69 RKEVTQSQPNSQKLNLTSYPMMPIGVVHSCFSTRNGTPRQPLLVPLARACLVFNTTRVPP 128
Query: 354 AALEGLSEYSHCWIIYVFHLNTNMDKFWKQCSKVGLKAKV 473
A+LEGL EYSHCWI+YVFHLNT++DK WK SK G KAKV
Sbjct: 129 ASLEGLEEYSHCWILYVFHLNTDLDKLWKHPSKSGFKAKV 168
>emb|CAN66858.1| hypothetical protein VITISV_029168 [Vitis vinifera]
Length = 551
Score = 233 bits (595), Expect = 9e-59
Identities = 127/244 (52%), Positives = 165/244 (67%), Gaps = 1/244 (0%)
Frame = +2
Query: 620 MGVFATRSPHRPCPIGLTLAKVEAVQGNMVLLSGVDLVDGTVLLCFCTXXXXXXXXXXXX 799
MGVFATR+PHRP PIGLT+AKVEAV GNMVLLSGVDLVDGT
Sbjct: 190 MGVFATRTPHRPNPIGLTVAKVEAVHGNMVLLSGVDLVDGT------------------- 230
Query: 800 XXXXXXXXXXPVLDIKPYLPYCESIKDASVPTWVKDDDLLAVASVEFSPEFFSSLADCWV 979
PVLD+KPYLPYC+ ++ A++P WV+DD+LL VASV FS +F S+LA+CWV
Sbjct: 231 ----------PVLDVKPYLPYCDCVQGAALPKWVEDDNLLTVASVNFSDDFPSALAECWV 280
Query: 980 TAEKNSLYASLDEIQSLTKQVLSWDIRSLSQRIRPHNVVLRTDNHSEGTNLSDLEDDKDE 1159
AEK SLYAS +E+QSL KQVLSWDIRSLSQR RPHN + + + SDL D + E
Sbjct: 281 IAEKKSLYASPNELQSLIKQVLSWDIRSLSQRDRPHNSLFSMGSSAAVDKTSDLNDWQAE 340
Query: 1160 ILPHENAQSSVPSSEDVTYYLLLEDFDISYKINGDGNVLVGKTIISSESLRRQHSCSS-T 1336
+ E+ ++P SED+ Y+L+LE D+SY+I+ +GNVLV K +SS+ + + S+
Sbjct: 341 EVQRESEPVALP-SEDIIYHLILEGLDVSYRIDCNGNVLVEKITLSSDIPKNNRNGSNYK 399
Query: 1337 MWTE 1348
+W++
Sbjct: 400 IWSD 403
Score = 113 bits (282), Expect = 2e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 264 FRTRYGTPRQPLLVPLARACLVFDTSEAPPAALEGLSEYSHCWIIYVFHLNTNMDKFWKQ 443
+ R GTPRQPLLVPLARACL+FD++ PPA+LEGL EYSHCWIIYVFHLNT+++K WK
Sbjct: 104 YNPRNGTPRQPLLVPLARACLIFDSARVPPASLEGLGEYSHCWIIYVFHLNTDLEKLWKD 163
Query: 444 CSKVGLKAKV 473
SK KAKV
Sbjct: 164 PSKSKFKAKV 173