BLASTX nr result

ID: Coptis25_contig00004929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004929
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...   172   6e-41
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   172   6e-41
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
ref|XP_003616997.1| Transmembrane protein [Medicago truncatula] ...   165   7e-39
ref|XP_002518432.1| conserved hypothetical protein [Ricinus comm...   164   9e-39

>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score =  172 bits (435), Expect = 6e-41
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = -3

Query: 538 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 359
           +I  ERER+ ++PKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLTEWAPEPRDVYWHN
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 358 LVVPFVTLTIRRLIIDVAXXXXXXXFMIPIAFVQSLANITGIEKAAPFLKPLVQ 197
           L +PFV+LT+RRLII VA       +MIPIAFVQSLA+I GIEKA PFL+P+++
Sbjct: 362 LAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score =  172 bits (435), Expect = 6e-41
 Identities = 80/114 (70%), Positives = 96/114 (84%)
 Frame = -3

Query: 538 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 359
           +I  ERER+ ++PKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLTEWAPEPRDVYWHN
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 358 LVVPFVTLTIRRLIIDVAXXXXXXXFMIPIAFVQSLANITGIEKAAPFLKPLVQ 197
           L +PFV+LT+RRLII VA       +MIPIAFVQSLA+I GIEKA PFL+P+++
Sbjct: 362 LAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  168 bits (426), Expect = 7e-40
 Identities = 80/114 (70%), Positives = 95/114 (83%)
 Frame = -3

Query: 538 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 359
           +I  ER++I++NPKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLT WAPEPRDVYW N
Sbjct: 300 EISLERDKIVNNPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTIWLTGWAPEPRDVYWDN 359

Query: 358 LVVPFVTLTIRRLIIDVAXXXXXXXFMIPIAFVQSLANITGIEKAAPFLKPLVQ 197
           L +PFV+LT+RRL+I VA       FMIPIAFVQSLANI GIEKA PFLKP+++
Sbjct: 360 LAIPFVSLTLRRLVIAVAFFFLTFFFMIPIAFVQSLANIEGIEKALPFLKPIIE 413


>ref|XP_003616997.1| Transmembrane protein [Medicago truncatula]
           gi|355518332|gb|AES99955.1| Transmembrane protein
           [Medicago truncatula]
          Length = 766

 Score =  165 bits (417), Expect = 7e-39
 Identities = 81/139 (58%), Positives = 103/139 (74%)
 Frame = -3

Query: 613 LFICGENPSFLLLFSLPEAHNRRQWQIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQ 434
           L +CG     +  ++   A  R    IE E++++  NPKSIMPA FVSFK+RWGA V AQ
Sbjct: 277 LGLCGSKVDAIDFYTA--AIERLSRDIELEKDKVTKNPKSIMPAAFVSFKTRWGAAVCAQ 334

Query: 433 TQ*SRDPTMWLTEWAPEPRDVYWHNLVVPFVTLTIRRLIIDVAXXXXXXXFMIPIAFVQS 254
           TQ +R+PT+WLTEWAPEPRD+YW N+ +P+V+L+IRRL+I VA       FMIPIAFVQS
Sbjct: 335 TQQTRNPTIWLTEWAPEPRDIYWDNMAIPYVSLSIRRLVIGVAFFFLTFFFMIPIAFVQS 394

Query: 253 LANITGIEKAAPFLKPLVQ 197
           LANI GIEKAAPFLK +++
Sbjct: 395 LANIEGIEKAAPFLKSIIE 413


>ref|XP_002518432.1| conserved hypothetical protein [Ricinus communis]
           gi|223542277|gb|EEF43819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score =  164 bits (416), Expect = 9e-39
 Identities = 78/114 (68%), Positives = 94/114 (82%)
 Frame = -3

Query: 538 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 359
           +I  ERER+  +PK+IMPA FVSFK+RWGA V AQTQ SR+PT+WLT+WAPEPRDVYWHN
Sbjct: 302 EIVEERERVEKDPKAIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTDWAPEPRDVYWHN 361

Query: 358 LVVPFVTLTIRRLIIDVAXXXXXXXFMIPIAFVQSLANITGIEKAAPFLKPLVQ 197
           L +P+V+L IRRLI+ VA       FMIPIAFVQSLA+I GIEK APFLKP+++
Sbjct: 362 LAIPYVSLAIRRLIMGVAFFFLTFFFMIPIAFVQSLASIEGIEKRAPFLKPIIE 415


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